Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
320 (294) |
PWM (Da): |
34510.26 (31300.6) |
Transmb domain: |
i7-26o |
PI (pH): |
7.4 (6.76) |
Peptide Signal: |
cut: 27 range:27-320 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFYSRFYYI FYLSLLMFLL IRLSSAQLSS DYYEKSCPKA IYTIKDAVTN AVAKEHRMGA SLLRLHFHDC FVNGCDGSVL LDDTSDFTGE KTAKPNSNSL RGFDLIDTIK SQVEKLCPGI
VSCADIIAIA ARDSVAILGG PSWTVQLGRR DSTTASLSSA NSDIPSPLMD LTDLITNFAN KGFTAKEMVA LAGAHTIGQA QCTTFRERVY NETTIDSSLA TSLKSNCPST GGDDSLSALD
AATPAIFDNH YFNNLKKNKG ILHSDQQLFS GGSTDSQVTT YGTRPITFAA DFAKAIVKMG NLSPLTGTNG QIRTNCRKIN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic. No EST. Uncorrect prediction from SGN, Edwards2017 (last exon only due to scaffold border), completed using TN90 (mRNA_82715 gene_38394) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTTTT ATTCGCGATT TTATTATATT TTCTACTTGT CTCTGTTAAT GTTTTTACTA ATTAGACTCT CTTCGGCACA GTTGTCTTCG GACTACTATG AGAAATCTTG TCCAAAAGCT
ATTTATACAA TTAAAGACGC AGTGACAAAT GCTGTGGCGA AAGAGCATCG CATGGGGGCC TCTTTGCTCC GTCTTCATTT CCACGATTGC TTTGTTAATG CATGTTTCTA TCTAATACTT
TATCTTTTGG TTTGCTTTTT ATATGTTTTG TGCATGCGCG GATTATTGTG ACATAGTTTT GTTTTTCACA CTCAATTTAT TATATATAAA TTAAACTAGT GCGTGCAGGC GATACAACTA
GTTGAATCAG AATTCACGAA TTATTTTAGA ATATAAAAAT GCCGAAAACG AAACGTCTTT GCTCTTGAAT AGAGTTGGTT TGCTGATAAA AAAATTCCGT TAAACTCGGC CCAATTTATG
TGTGAATTGC ATTTTTCCAT TATATTCTAT AGTTAAATTA TAGGAAAAGA AGGAATTACC AAGGGCTGTC ACATGAACAA AAAATTAGCA TTTGAGACTA ATGCCCTGGA TGTATACGTA
GTACGAACTA GTTTCTATCT TGCCCAAGTA GGATTATTGT TTCATATGTT ATTTATTTAT TTATTTGTTT TGAAATAAAT ATTGGGGTCA TTTGATTCTT ATCATACCAC ATTCTTGTTT
AACCAAAAAA AAAAGGTCTT TGAGGGAGTT TGGACATAAG AATTATAAAA TTTCGAAAAA AGTAAAAATA GTATTTGAAA ATTAGAGTTG TGTTTGGACA TGAATATAAT TTTGGGATGT
TTTTAAATTT TTGTGAGTGA TCTGTAGTGA ACATTTTGAA AATTAGCTTT TTGGAATTTT TCAGATTTTC AAAAAATTCC GAAATTTATT TTTCAATAAA AATCGAAAAT TTCATGGCCA
AACACTAATT TCGAAAAAAA GTCAAAAGGA AAAAAAGAAT CTTTTTTCAT GGCCAAATGG GCCTTTATGT AAAAGTAAAG CTGGGCTGTT GCAACGATAT TTTCCTTTTA TACAAACTAT
CACTGTTAAT ATTTATATTA CACGGAAAAT ATCTACTTAA TTACTTTTGA TTGAATATTT TCCAAGTAAT AGGGTTAAGA ATTAAAAAGT ACTAATATCT ATTTTTTACA GGGATGTGAT
GGATCCGTAT TACTAGATGA TACTTCAGAT TTCACTGGAG AGAAGACAGC AAAACCAAAT TCAAATTCAC TAAGAGGTTT TGATTTGATT GATACAATCA AGTCTCAAGT AGAGAAATTA
TGTCCTGGAA TTGTTTCTTG TGCAGATATT ATAGCTATTG CAGCACGAGA CTCTGTTGCA ATAGTAACTA CTTTAATCTC TATCTTCCCT CTCCTAACTT AAACAAGTTT ATAATTTCTT
CTATTCAATT TCAAAATCCA CAAGTTTATG ATTTCTTCTA TCCAAGGATT TGGGACCGTA TATAATCAGT ATATAATCTA CGTAAATCAG CTAGAAGAAA TTTAAGGTGA ATCCGACTGG
CTATTTATGT AAAGTTCCCT ATATTTATGG ATATTTTTTA CTTTTAGCCC ACGCCAGAAA CTATTTACAT TTGGTAGTCG AAAAAAGTGT ATGAAATTTG TATAATTTTT GTATATAGCA
TACAAAATGT ATATATATTA AAAAAAATTA TTTTTTTTGT TATTATTTTG AGAACGACTA TACAATATTA TTTTCCGTAT ATTTATAGCT CAATGAAGTT CCTTTGGGCT TGGTGCAGCT
AGGTGGGCCT TCGTGGACTG TCCAATTAGG TAGAAGAGAT TCTACAACAG CAAGTTTAAG TTCAGCAAAT AGTGATATCC CTTCTCCTTT GATGGATCTT ACTGATCTTA TTACCAATTT
TGCCAATAAA GGCTTCACTG CTAAAGAAAT GGTTGCCCTT GCAGGTAATT AACAATTCTT TTATTTTTCC AGTTTAAAGA AAATTTTATT ATCGCCTTAG AAATAATTTG GAATGCGTAC
TTGGGCTCGA ATAGAACAGA ATATAAGCTA GCTTAAGCAT TTTTTCGCTT ATTTACTTGT TTGGTAAATA CCAAACTTAT AAACCAAGTA CTCTAATGAT TTTTCACTTA TAAACACTTT
TACTTCGATC AAGAATTATA TTATTATGTT TCTAATATCT TTTATAATTT TTTAAATTCA CTCTCCATTC TACTTATGTC GTTCTTCTTT ATCCTTATAA AAACAATTTT TTTATTAGTT
TAAATAATTT TTAAGAAATC TTGATCATTC TAAGAGAAAA ATATTTATCA GCATATTTTT ACCAAACGTA ACTGCTTATT TTATATAGTT AGGGGTCGTT TGGTTGGGAA ACAGTTATTC
AATGATTAAT TATACCGGGA CTAGTTATAT CACCATCCCA TAGAGATAAA ACAATACTAC AATCCCGGAA TTAGTTATAC AACGATTTTA TCTCAATCAA ATATGGGTTA AATTCATCTC
AAATAAAATC CGGGATTAAT TATCCCTTAT CTCTCATATC AAACGAGACC TTAGCTTCAG CACTATGCTC GTGAACTATT TTTAATCAAC TAATTAAGCC AAACATACTC TAAATACAAA
AATTCACATA TTCGAATCCC CAACTATTTC AGAGATGAAG TATAGTTGAT TGATTTATTG ATTAATCTCG AAATATTTTC CAGGTGCTCA CACCATAGGT CAAGCACAAT GTACAACATT
TAGGGAACGT GTGTACAACG AAACAACCAT CGATTCATCG TTGGCTACAT CGTTGAAATC AAACTGTCCG AGTACAGGTG GAGATGACAG CCTTTCTGCA CTTGATGCAG CTACCCCTGC
AATATTTGAT AACCATTATT TCAACAACTT AAAGAAAAAT AAAGGGATTC TTCACTCAGA CCAACAACTA TTTAGTGGTG GTTCTACGGA TTCTCAGGTT ACTACTTACG GTACTCGTCC
TATAACATTT GCTGCAGATT TTGCAAAGGC TATTGTCAAA ATGGGAAACT TAAGCCCGCT TACTGGAACC AATGGCCAGA TTCGTACCAA TTGCAGGAAA ATCAACTAA
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Retrieve as FASTA
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