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Entry information : ZmDiOx[P]02(Zm00001d042253)
Entry ID 8564
Creation 2010-12-23 (Marie Brette (Scipio))
Last sequence changes 2011-09-28 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2023-01-18 (Christophe Dunand)
Peroxidase information: ZmDiOx[P]02(Zm00001d042253)
Name ZmDiOx[P]02(Zm00001d042253)
Class Alpha-dioxygenase    [Orthogroup: DiOx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmDiOx[P]02
start..stop		 S start..stop
ZmDiOx[P]05 426 3.89e-154 1..227 1..236
ZmDiOx[P]04 425 5.86e-154 1..227 1..227
ZmDiOx[P]06 425 7.59e-154 1..227 1..236
ZmDiOx[P]03 424 1.05e-153 1..227 1..228
Literature and cross-references ZmDiOx[P]02(Zm00001d042253)
Protein sequence: ZmDiOx[P]02(Zm00001d042253)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   226
PWM (Da):   %s   24771.94 Transmb domain:   %s   i7-29o
PI (pH):   %s   5.96
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
DDGLLLHE*N GVALLGDVRx SWVGVPILQA LFVKEHNAVC DAIKEEHPNL SDEELYGYAR LVTSAVIAKV HTVDWTVELL KTKTMRAGMR ANWYGLLGKK IEDTFGHIGG PTLGGLVGLK 
KPINHGIPYS LTEEFTSVTL KLRDPTGQPD ANKSPTYLKD IDIGELVGLK GEEQLSKIGF EKKILSMGYQ ACGALELWNY PSFFRDLIPQ NLDRTNRSDR IDLASLE 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Partial and stop in frame. Incorrect prediction from phytozome. join(155877534..155877664,155877836..155877980,155878140..155878275,155878286..155878350,155878653..155878854)
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATGATGGTC TTCTTTTGCA TGAGTAGAAT GGTGTGGCAT TATTGGGTGA TGTTCGCAnn AGTTGGGTTG GGGTTCCGAT CTTACAAGCT CTTTTTGTTA AGGAACACAA TGCAGTGTGT  GATGCAATAA AGGTAAGAGA AGCATCACTA TTATTATCTA TTTGTTTAGT TTATATGAAG AATTTGATGT TCTTGATTTC TTTCCACCGT ATCGATAAAG CTGTTGTTTA TTAATTACCA  AGACATTATT TTTTTATGCT AAAATATGAA GAAACAATTA AAAATGCTCT TTTAATATCT CAAGAAGAAC ATCCCAACCT ATCAGACGAA GAATTATATG GGTATGCTAG ATTGGTCACT  TCTGCTGTCA TTGCAAAGGT TCACACTGTT GATTGGACTG TCGAGCTTCT CAAGACTAAG ACCATGAGAG CTGGAATGCG TGCAAATTGG TGAGGATATA TTATCTCATT TTCTCATATT  TGTTGAAAGA AAACAATTAA CGCTGGTATT ACTTTTCCAA GTGGAAATTT TATTTACATC TGCATATTCA AATTAATTAA TTAGTGAGAT TGTGTACAAA TTTACCTCAT TCTAATTCTT  TTGTGAAGGT ATGGTTTATT GGGTAAGAAA ATAGAAGATA CATTTGGTCA CATAGGAGGA CCGACATTAG GTGGGCTCGT GGGATTGAAG AAGCCGATCA ACCATGGCAT ACCTTATTCT  TTGACTGAAG AGTTTACCAG TGTTTACAGA ATGCACTCTT AAGCTCAGGG ATCCGACCGG CCAACCCGAT GCAAATAAGT CCCCAACGTA CCTGAAAGAG TGAGTAGACA ATTTATATAT  GTTTGGCATC CATTCCTCTC ATTTTTATGT AGAATTAAAT CAGACAGAAA AGAGTGATAC AGATTATAAA GAATTGAACA AAAAAAGTTA AGACATTCTT CTATTAGATA TCGACTCTTA  CATAATGCAT TACTGAACCA GACTTTAGAC ACTGAACTTG ACACAACAAA CAACTACTCT TAAAAATGTA GCTAGAATGT ATAAGTTTTC TGCTCGATTA GCACATTTTA GTACAACTAA  CATAAACACC GAGTTAAATT CTTTCTTGTG TCGAAACATA GCATCGATAT TGGAGAGTTG GTTGGTCTTA AGGGGGAAGA ACAACTATCA AAAATAGGGT TTGAAAAGAA AATATTATCA  ATGGGATATC AAGCTTGTGG TGCACTTGAA CTATGGAACT ACCCAAGTTT CTTCAGGGAC CTCATACCAC AAAATTTGGA TCGTACCAAT CGATCTGACA GGATCGACCT TGCTTCCCTA 
GAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATGATGGTC TTCTTTTGCA TGAGTAGAAT GGTGTGGCAT TATTGGGTGA TGTTCGCAnn AGTTGGGTTG GGGTTCCGAT CTTACAAGCT CTTTTTGTTA AGGAACACAA TGCAGTGTGT  GATGCAATAA AGGAAGAACA TCCCAACCTA TCAGACGAAG AATTATATGG GTATGCTAGA TTGGTCACTT CTGCTGTCAT TGCAAAGGTT CACACTGTTG ATTGGACTGT CGAGCTTCTC  AAGACTAAGA CCATGAGAGC TGGAATGCGT GCAAATTGGT ATGGTTTATT GGGTAAGAAA ATAGAAGATA CATTTGGTCA CATAGGAGGA CCGACATTAG GTGGGCTCGT GGGATTGAAG  AAGCCGATCA ACCATGGCAT ACCTTATTCT TTGACTGAAG AGTTTACCAG TGTTACTCTT AAGCTCAGGG ATCCGACCGG CCAACCCGAT GCAAATAAGT CCCCAACGTA CCTGAAAGAC  ATCGATATTG GAGAGTTGGT TGGTCTTAAG GGGGAAGAAC AACTATCAAA AATAGGGTTT GAAAAGAAAA TATTATCAAT GGGATATCAA GCTTGTGGTG CACTTGAACT ATGGAACTAC 
CCAAGTTTCT TCAGGGACCT CATACCACAA AATTTGGATC GTACCAATCG ATCTGACAGG ATCGACCTTG CTTCCCTAGA A 

Retrieve as FASTA