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Entry information : CpapPrx45 (CpPOD29 / evm.model.supercontig_62.46)
Entry ID 8773
Creation 2011-06-28 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-08-14 (Christophe Dunand)
Peroxidase information: CpapPrx45 (CpPOD29 / evm.model.supercontig_62.46)
Name (synonym) CpapPrx45 (CpPOD29 / evm.model.supercontig_62.46)
Class Class III peroxidase    [Orthogroup: Prx024]
Taxonomy Eukaryota Viridiplantae Streptophyta Caricaceae Carica
Organism Carica papaya    [TaxId: 3649 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CpapPrx45
start..stop		 S start..stop
PpePrx08 498 2.79e-179 33..342 24..332
MePrx117 493 5.75e-177 12..343 6..334
RcPrx31 491 2.6e-176 1..342 1..335
PtPrx80 478 3.87e-171 35..342 26..337
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8773' 'complement(join(343608..344017,344189..344354,344441..344632,344781..345041))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 344781..345041 259 N° 2 344441..344632 190 N° 3 344189..344354 164 N° 4 343608..344017 408
complement(join(343608..344017,344189..344354,344441..344632,344781..345041))


exon

Literature and cross-references CpapPrx45 (CpPOD29 / evm.model.supercontig_62.46)
DNA ref. Phytozome 12:   supercontig_62 (345041..343608)
Protein sequence: CpapPrx45 (CpPOD29 / evm.model.supercontig_62.46)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (294)
PWM (Da):   %s   38082.08 (30527.9) Transmb domain:   %s   i5-27o
PI (pH):   %s   6.88 (5.99) Peptide Signal:   %s   cut: 24 range:24-317
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDYKVFLYIILIQTLLVLHLFPLASNAFPSRAYRYPFGYDELNYNFYDQSCPRLPMMVKYGVWSAFQNDSRIAASLLRLHFHDCFVNGCDASLLLDDTDDFKGEKNAFPNRNSVRGFEVI
DAIKEDVERFCPETVSCADILALAARDAVLTAGGPFWYVPLGRRDGITASQKAANEQLPSPFEPLQNLTDKFLSKGLDLKDLVVLSGGHTIGFAQCFTFKRRLFDFKGSGKPDPTLDSSA
LRNLRSMCPNKDIANTNLAPLDYSSTSKFDNSYYANLVNNTGLLESDQALMANPNTAAVVNSYSSNPFLFSRDFATSMIKLGKVGVLTGTDGQIRKTCRFVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACTATAAAGTTTTCTTATACATCATTCTCATCCAAACCCTTCTGGTCCTGCATTTGTTTCCTCTTGCTTCTAATGCCTTCCCTTCTCGCGCATATAGATACCCTTTTGGATATGAC
GAGCTTAATTACAACTTTTACGATCAATCATGTCCTCGATTGCCAATGATGGTTAAATATGGTGTTTGGTCAGCTTTCCAGAACGACTCTAGGATAGCTGCATCCCTTCTTCGGCTGCAC
TTTCACGATTGTTTTGTTAATGTAAATTGTTTCTTCCGTTTAGTTTCTTTCATCTTTTTTGAATAATATTGAACCGTTTTTATCAGTTTAAACTTTATTTTTTAAAAAAAAAAAATAGTA
GTTTGAATTATAACTCTTTGCTGTATCTATAATTTTCCTCATGGCGTAGGGGGCTGTGATGCTTCTCTTCTTCTGGACGACACAGACGATTTCAAAGGGGAGAAAAATGCATTTCCAAAC
CGGAATTCAGTACGTGGGTTCGAAGTCATCGATGCAATAAAAGAAGACGTTGAGAGATTTTGCCCGGAAACTGTTTCATGTGCTGATATTCTAGCTCTTGCTGCGAGAGATGCTGTTCTC
ACGGTTAGCTCTAGGCCGATTTTCTTGCAGAAATCGTCTAATGGTTCCATGTTTTCTTAATTTGGCTTGTCCAACTTCGTGTTGTCCAGGCGCAGGAGGACCCTTTTGGTATGTTCCACT
AGGCAGAAGAGATGGAATCACAGCTAGTCAAAAAGCAGCTAATGAACAATTACCCTCACCATTTGAACCTTTGCAGAATCTCACAGACAAATTTTTATCTAAAGGACTCGACTTGAAAGA
TCTGGTTGTCCTCTCAGGTAAATTAATTGAAAACTCTCGATCAATTATTTATGTTCTTATACAACTTCTTTATGTATAAGCCCGCTTAGATTTAAATAATTGATTGAACCGATTGTTCTA
AAAATTTTTAACTTAGAAAAAAATAGTCAATCAATTATTTAAATTCTAACAGGTTATATATCGGACAGGAGAGGGCATACGATAGGTTTCGCCCAATGCTTCACATTCAAGAGGAGACTT
TTCGACTTCAAGGGTTCCGGCAAGCCTGACCCGACTCTCGATTCGTCGGCGTTGAGAAACCTAAGGAGCATGTGTCCAAACAAAGACATAGCTAACACCAATCTTGCTCCTCTTGATTAT
TCAAGTACTTCTAAGTTTGATAATTCCTACTATGCAAACCTAGTCAACAACACAGGCCTTCTTGAGTCCGATCAAGCACTGATGGCTAATCCAAACACAGCTGCAGTTGTTAATTCTTAT
AGTTCAAACCCTTTTCTCTTCTCCAGAGATTTTGCAACCTCCATGATCAAGCTTGGCAAGGTCGGAGTCTTGACTGGCACGGATGGCCAGATTAGGAAGACATGTAGATTTGTCAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACTATAAAGTTTTCTTATACATCATTCTCATCCAAACCCTTCTGGTCCTGCATTTGTTTCCTCTTGCTTCTAATGCCTTCCCTTCTCGCGCATATAGATACCCTTTTGGATATGAC
GAGCTTAATTACAACTTTTACGATCAATCATGTCCTCGATTGCCAATGATGGTTAAATATGGTGTTTGGTCAGCTTTCCAGAACGACTCTAGGATAGCTGCATCCCTTCTTCGGCTGCAC
TTTCACGATTGTTTTGTTAATGGCTGTGATGCTTCTCTTCTTCTGGACGACACAGACGATTTCAAAGGGGAGAAAAATGCATTTCCAAACCGGAATTCAGTACGTGGGTTCGAAGTCATC
GATGCAATAAAAGAAGACGTTGAGAGATTTTGCCCGGAAACTGTTTCATGTGCTGATATTCTAGCTCTTGCTGCGAGAGATGCTGTTCTCACGGCAGGAGGACCCTTTTGGTATGTTCCA
CTAGGCAGAAGAGATGGAATCACAGCTAGTCAAAAAGCAGCTAATGAACAATTACCCTCACCATTTGAACCTTTGCAGAATCTCACAGACAAATTTTTATCTAAAGGACTCGACTTGAAA
GATCTGGTTGTCCTCTCAGGAGGGCATACGATAGGTTTCGCCCAATGCTTCACATTCAAGAGGAGACTTTTCGACTTCAAGGGTTCCGGCAAGCCTGACCCGACTCTCGATTCGTCGGCG
TTGAGAAACCTAAGGAGCATGTGTCCAAACAAAGACATAGCTAACACCAATCTTGCTCCTCTTGATTATTCAAGTACTTCTAAGTTTGATAATTCCTACTATGCAAACCTAGTCAACAAC
ACAGGCCTTCTTGAGTCCGATCAAGCACTGATGGCTAATCCAAACACAGCTGCAGTTGTTAATTCTTATAGTTCAAACCCTTTTCTCTTCTCCAGAGATTTTGCAACCTCCATGATCAAG
CTTGGCAAGGTCGGAGTCTTGACTGGCACGGATGGCCAGATTAGGAAGACATGTAGATTTGTCAACTGA

Retrieve as FASTA