View Redoxidase 8971

Entry information : GmPrx172 (Glyma08g19340.1)

Entry ID	8971
Creation	2011-07-04 (Qiang Li)
Last sequence changes	2011-10-03 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2015-12-26 (Christophe Dunand)

Peroxidase information: GmPrx172 (Glyma08g19340.1)

Name (synonym)

GmPrx172 (Glyma08g19340.1)

Class

Class III peroxidase [Orthogroup: Prx014]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx172 start..stop	S start..stop
GmPrx03	626	0	1..324	1..323
LjPrx72	500	0	1..306	1..304
CclPrx116	486	6.69e-175	1..324	1..322
MtPrx21	475	2.05e-170	19..324	20..323

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8971' 'complement(join(14636740..14637164,14638878..14639040,14639328..14639510,14639681..14639884))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	14639681..14639884	202	N° 2	14639328..14639510	181	N° 3	14638878..14639040	161	N° 4	14636740..14637164	423
complement(join(14636740..14637164,14638878..14639040,14639328..14639510,1463968 1..14639884))

Literature and cross-references GmPrx172 (Glyma08g19340.1)

DNA ref.	Phytozome 12: Gm08 (14639884..14636740)

Protein sequence: GmPrx172 (Glyma08g19340.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	324 (303)
PWM (Da):	35202.73 (32780.6)
PI (pH):	5.02 (5.17)	Peptide Signal:	cut: 22 range:22-324

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MALFVLSLLFFSFLMGMSSEGQLEVGFYSNTCPQVDSIVGAVVRDAVLSDPNMAAVLLRLHFHDCFVQGCDGSILIENGPQSERHAFGHQGVRGFEVIERAKTKLEGSCPGLVSCADIVA
LAARDAVVMANGPAYQVPTGRRDGLVSNLSLADDMPDVSDSIELLKTKFLNKGLSVKDLVLLSGAHTIGTTACFFMTRRLYNFFPSGEGSDPAISQNFLPQLKARCPKNGDVNVRLAIDA
WSEQKFDINILKNIREGFAVLESDARLNDDIATKNIIDSYFSPFSPMFGPSFEADFVESIVKMGQIGVKTGFLGEVRRVCSAFN*

Retrieve as FASTA

Remarks

Complete sequence from gonomic (3 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGCTCTTTGTTTTGTCTCTCTTATTCTTCTCATTCTTAATGGGGATGAGTTCCGAGGGTCAGCTTGAAGTAGGTTTCTACTCCAACACATGTCCTCAAGTAGACTCAATTGTCGGT
GCCGTTGTTAGAGACGCTGTTCTCTCTGACCCCAACATGGCTGCTGTCTTACTCAGACTTCATTTTCACGATTGCTTTGTTCAGGTAATTGAGGTCTATCTCTCTCTCTCTNNNNNNNNN
NNNNNNNNNNNNNNNNTGTTTTTATATATATACATGGGTATGTGTATACGTTGATGTTTCCTTTTCATCCTTAATTTTGGTTTTTATTCGGTGATATGATGTATATGTATTGGATCAATA
TTATTTCATTTCAGGGGGATGTGATGGTTCAATTCTGATTGAGAATGGTCCACAATCGGAGAGACATGCATTTGGACATCAAGGGGTTAGAGGGTTTGAAGTGATAGAAAGAGCCAAGAC
AAAATTGGAAGGCTCTTGCCCCGGCTTGGTTTCTTGTGCAGACATAGTGGCTTTGGCAGCCAGAGACGCTGTAGTCATGGTCCTTACCTAACTAACTTCATTATTAGTTAATTCATGCTT
TTTCTCTTCTTGCTCATATTTCTATACATCTTTAAAACAAAAAAAGAGTTATGTAAGATGCCTACACAAATATATATATGTTTATATGTTTGAAAAAGTGTTGAATGCATGGTTTTAAAT
ATCAAAATATGTGCATCAGAAAATATCAAAATATCTTGATGTTGTGATCATAATTATGATTGCATGCGAACTGCCTTTTAAAACCATGGTTGGATGATATATTTTATTTTATGTACATGC
ATGCAGGCGCAAATGGGCCGGCATATCAAGTTCCAACAGGGAGGAGAGATGGGTTGGTTTCCAATCTTTCGCTTGCAGATGACATGCCAGATGTTAGTGATTCAATTGAGCTACTCAAGA
CCAAGTTTCTCAACAAGGGTCTCTCCGTGAAAGACCTTGTTCTTCTTAGTGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGCTGAATAG
GTGAGATCATGGTTGTTGAGAAGGAAAGGTAATATGAACCTTGGCCAAAAGCAAAGAATATTATTTGACTTTAGACATGCAATAGCTAAATTACCAAACATATGCATATAACTTCTACAC
TCCGCTTTAAAATACAATGAAAGCAAGTGAAGGAGTTCTGTACCCAATTTGGGAAATTGATGGTGAAGTCCTGAGAATTATTCGAGAAATTCTGATTATACAATAAATTTATATTACTTT
TTATACAAATAAGACAGAAGTAAGAAAAGAAGAAAGATAACGTGTAGATAGGATAAGTGTATTGAAAAAGACAGAAAAATAAATAAATAAATTATTGTATGAATTTGTTTTATGAATATG
ATCGATATCTTTTGTTTAAATATATGATATGATATATGAATGAGATCATCAAACTTTAACAATATCTCTTCCGCTTTTGACAATATTTCCGGATTCAATAAACGTTGACATAACAACTAC
CTTTTTTTTTATTAATAAAATTATAAAGCAATAGGGGTCTTAGTACCTAGGATTCTGAACTGTGCCGTATGTTCCATTTATCCATTTAGGATAATGTTAGCTAAAAGGATCCATCTCATA
GATGTGTATATTAATTATTAATTTAATGATGCGTGTGAGAGAACTTTGATTTAATTCATGTCTTTCTATCAAATTCGATTAGTTGTATGTTGTTTACTAATAATGAAAGAATACGGTTGC
TAAAAAAATAAGTGGAGCATTTAATTTTACTAATAAAATATTGTAATTGTAACAATAGGCTGCCCTTTGAGCTGTATTTCTCTGTGTGCTAGCTAGAGCTAGCTTTCGTTTCATTGGTTT
GGTTTTACCTAATTCATCTGCCTAAAGTTTCGTATCAAACCGAACGCAAAATCGTGGCAGATGGCAGTTCTAATATTACACATGGTGCACATGCAACGTTACAGTTGTAATCCATATTAA
TTGATATTGATAGAGATCTTTGCTTGTTGTCTTTTTCTCTTATATTTACTATTTTATACTTTCTGATTACTTGAGAACCTATTTACTGGATTTCTGGGGAAATAGCTGGGTGATGCTCAC
GACAGTGGCAAATATAAGCTAGAGTAATATGAGCAAGTAAAGAAAACGGACTCTTTTTCTGGTAAGCAAAGAAAATATAGTTAATGTTATTAACACATAGAGTGAGACAAACTCCAAAAC
ATGAAATCAATTAACGTGAGATTATTTAAATTTAATTAAATATTTTAAATTCAAGTCTTAGAAATATAATTATATTAATCATAATAATTTTATATCATTTAAATATGATATCTCTAACAA
AGGATACAAGTACTATTAAAAAAAAACCGAGAAACAATAATTTGGTTTCTCAAATTGACAATACTAATAAATTAGTCTTTACTTAATATTATAAGAAGGAAAAAATTATTCATCAACTTT
AAATAACTATAGAGTTAATTTTATTTTTTGTTAGCAATGTCTCACATGACTTGTCAATTATATCATGATCTACGTGACAACCCACTTAATGTGTCACGTGAAGTATACTATTAGACTAAA
GTGGTGATGATGATTATGAAAGTTTAGGATTATTTACTTGTTTGTAATATGGTAATATTTTATTCATTTTTAAAATAATTTTAGGTGTGCGCATACAATTGGAACCACAGCGTGTTTCTT
TATGACCAGAAGACTGTACAACTTTTTCCCAAGTGGTGAGGGGTCAGACCCAGCAATTAGCCAAAACTTCCTCCCTCAGCTAAAGGCAAGGTGCCCTAAGAATGGAGATGTTAATGTTCG
TCTAGCTATTGATGCATGGAGTGAGCAGAAGTTTGACATAAACATTTTGAAGAACATAAGGGAAGGTTTTGCTGTGCTAGAATCTGATGCCAGACTCAATGATGACATAGCCACCAAGAA
TATCATTGACTCCTATTTTTCTCCCTTCAGTCCAATGTTTGGACCTTCTTTTGAAGCTGATTTTGTTGAGTCAATTGTGAAAATGGGCCAAATTGGTGTCAAGACAGGTTTCCTTGGAGA
GGTTAGGCGCGTGTGTTCAGCTTTTAATTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA