Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
295 |
PWM (Da): |
32795.81 |
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PI (pH): |
8.34 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
LQLISANKLRSDFYNSQCPQALEAIKAEITSAVRKEPAMGLAFFRLHFIDCFVQGCDASNLLKDTANFTGEQSAIPSLDSRNGTDIIEKVKARVEKLCPGVVSCADILAVAARDSVVALG GPTWRVLLGRTDSTTANLSAVTTNLPSPYMDLDEYISCHIRKIKFNSQRNGCFGVQTIGYIKCLFVLRRIYNESNINPTYARALQAKCPLEGCDDNIVPLDIITPNHFDNAYYKNLLKKK GLLHTDQELYNGGSILCHEPFYATNPLQFRRDFAKAVIKFGNINPLSGTNWQIRK* |
Retrieve as FASTA
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Remarks |
Partial or pseudogene sequence from genomic. Incorrect prediction from Phytozome. (Stop and PS are missing, frame shift). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTTCAGCTGATTTCTGCTAATAAGTTACGCTCAGACTTTTATAATTCACAATGTCCCCAGGCACTTGAAGCCATTAAGGCAGAAATAACCTCTGCTGTGAGGAAAGAACCTGCCATGGGT TTAGCCTTCTTCCGTCTTCATTTCATTGATTGCTTTGTCCAAAAGCAAGTTTTGATTTTCCTCAATATTTTATGCCTTATACTACTTATCATACAATTTCGTACAATATGCATTTTCCTC ATGCATGAGTTCCAATATTCTTCTACGTATGAAAATTAAGATTACTTAACAATTTAAAACCACATAAAATATCATAGTCACACAGACATATTTATAGGATGATGCGGAAGAAAGAGAAAA AAAAATCCCTTTATTATTTGGTTAACCCGGTTCATAGAAAAATTAAGGTTTTTTTCTTCTTCTGATTTTCTTGCTTGAATATATCTATTATGTAGGGATGTGATGCATCAAACTTGTTGA AAGACACAGCAAATTTCACGGGCGAACAAAGTGCAATTCCTAGTCTTGATTCTAGAAATGGTACGGATATCATAGAGAAGGTAAAAGCTAGAGTGGAGAAGCTGTGCCCTGGTGTTGTCT CTTGCGCTGACATTCTAGCTGTTGCTGCGAGAGATTCTGTTGTTGCCCCGTGAGTATTGAAATAACTGTTTGGATTGTAGCTGCTGGTTAATGGTTTCAAAATTATGATTTGTGTCAATT TTTTGGTACATATACCGCTGATCGAAGTCACTCTTTTTCAATAATTCAACGATCATGTATAAGATATTTTGGATAAAATTGAACATTTATAATTGTGTAATCTTATAATTGACACTTATT CATATATAAAAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAAAAAAATATATTATGTTAAATTAATTTTATTTAATGA AATAATTTTTGTTATTTAATGAAGTATTTAGTTCTAGAATTTCCTGAAAAAATGAGAGTTGATATACTTCATAAGAAATTTTAATTCGATCGAAGATTGAATTAAAAGAATTAGTATATA TATATATATATTATGGTTTTCCATACATATTATTTATGGATGAAGCTCATTTTATATTCTTCAAAACAACATATAATATCAATTATCAATAAAGATTAGTTTAATATATAATTAATAAGA AATAAACTTATATCTTAAAAGAATATAAATTTAATTTTTAATTCTATAAATATTTTTATATTTTGAATCTTGAGACATGTCCTAATCTTGATAAACTCTCAATTCATTAAAACTAAAGTT ATAAAAAAACATAATACCAACTATAATCTCAAAGTGTAATAACTCTGCCAAATATTTATTTCTGAAACTTGTACTTTTTATTTTCTTTGCATTCCTTTGCTTACTTGTTTTGTTAGGATT AGTTTATTTAAACTTATTTGTTAAAATAAATGTTTATTTAATAAAATAATTAATTTTTTTTAATATGTTTGTCTAAACTGTTTCTGCTTAAAAAAAATAATTTTATATTTATTTTTAGGA GCAAATTCTACTTGTTTCTTTAAAAAATACTTATATAAAACAAACTTATTTTAATTTTTTTTTAAATTTAAACAAGTCCACCTTATTGTGTTATCTATGATATTTATTATGTTTTCTTTT TATTCCTCTCCTCTTTTTATTACACGTTACCAGCGTGATTTCTGATGGATGAAAACATGATTCCCAGCTAGGTGGACCAACTTGGAGAGTTCTATTAGGTAGAACAGACTCCACAACTGC AAATCTAAGTGCTGTTACAACAAATTTACCCTCTCCCTATATGGATCTTGATGAATATATATCTTGCCACATACGGAAAATTAAATTTAACAGCCAAAGGAACGGTTGCTTTTTTTCAGG TAATTAATTTCCATAATGCTTCGGATCTATTTTTCTATACATAATAAATGTATATTTATTATCACCTGCCTCTAGTTCTTATATACGAAAATTGAATGTGTTACTTAGGTGTTCAAACTA TAGGCTACATCAAATGTCTATTCGTCCTAAGAAGGATTTATAACGAAAGCAATATAAATCCCACGTATGCAAGAGCATTGCAAGCAAAGTGTCCCTTGGAAGGTTGTGATGACAACATAG TTCCTTTAGACATCATAACTCCAAATCATTTTGACAATGCTTATTACAAGAATTTACTGAAGAGAAAAAGGGTCTTTTGCACACTGATCAAGAGCTCTATAACGGTGGATCCATTTTATG CCACGAACCCTTTACAATTTAGAAGAGATTTCGCTAAGGCAGTGATCAAGTTCGGCAACATTAATCCACTTAGCGGCACCAACTGGCAAATCAGAAAATAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTTCAGCTGATTTCTGCTAATAAGTTACGCTCAGACTTTTATAATTCACAATGTCCCCAGGCACTTGAAGCCATTAAGGCAGAAATAACCTCTGCTGTGAGGAAAGAACCTGCCATGGGT TTAGCCTTCTTCCGTCTTCATTTCATTGATTGCTTTGTCCAAGGATGTGATGCATCAAACTTGTTGAAAGACACAGCAAATTTCACGGGCGAACAAAGTGCAATTCCTAGTCTTGATTCT AGAAATGGTACGGATATCATAGAGAAGGTAAAAGCTAGAGTGGAGAAGCTGTGCCCTGGTGTTGTCTCTTGCGCTGACATTCTAGCTGTTGCTGCGAGAGATTCTGTTGTTGCCCTAGGT GGACCAACTTGGAGAGTTCTATTAGGTAGAACAGACTCCACAACTGCAAATCTAAGTGCTGTTACAACAAATTTACCCTCTCCCTATATGGATCTTGATGAATATATATCTTGCCACATA CGGAAAATTAAATTTAACAGCCAAAGGAACGGTTGCTTTGGTGTTCAAACTATAGGCTACATCAAATGTCTATTCGTCCTAAGAAGGATTTATAACGAAAGCAATATAAATCCCACGTAT GCAAGAGCATTGCAAGCAAAGTGTCCCTTGGAAGGTTGTGATGACAACATAGTTCCTTTAGACATCATAACTCCAAATCATTTTGACAATGCTTATTACAAGAATTTACTGAAGCCATTT TATGCCACGAACCCTTTACAATTTAGAAGAGATTTCGCTAAGGCAGTGATCAAGTTCGGCAACATTAATCCACTTAGCGGCACCAACTGGCAAATCAGAAAATAA |
Retrieve as FASTA
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