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Entry information : MePrx116 (cassava4.1_030211m)
Entry ID 9074
Creation 2011-07-01 (Qiang Li)
Last sequence changes 2011-12-01 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-06 (Christophe Dunand)
Peroxidase information: MePrx116 (cassava4.1_030211m)
Name (synonym) MePrx116 (cassava4.1_030211m)
Class Class III peroxidase     [Orthogroup: Prx014]*
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MePrx116
start..stop		 S start..stop
MePrx29 468 7.67e-168 1..326 1..325
RcPrx85 433 4.52e-154 1..326 1..320
MePrx109 412 7.05e-146 1..326 1..321
CclPrx85 408 2.66e-144 1..326 1..317
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9074' 'complement(join(177396..177790,177883..178048,178130..178321,178398..178622))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 178398..178622 223 N° 2 178130..178321 190 N° 3 177883..178048 164 N° 4 177396..177790 393
complement(join(177396..177790,177883..178048,178130..178321,178398..178622))


exon

Literature and cross-references MePrx116 (cassava4.1_030211m)
DNA ref. Phytozome 12:   scaffold07035 (178622..177396)
Protein sequence: MePrx116 (cassava4.1_030211m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (299)
PWM (Da):   %s   34721 (31800.6) Transmb domain:   %s   i7-29o34-56i (i7-29o)
PI (pH):   %s   4.54 (4.47) Peptide Signal:   %s   cut: 28 range:28-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASRSSVLFTGFMTFLIMTLCSLPSQAQLSDETFYALSCPAAVAT
ISTTVSLAVLNDTRMAASLIRLHFHDCFVQGCDASVLLDDTPSMIGEKTSIFNDKSLRGFEVIDDIKSQLQSLCPGVVSCADIVTVAARDASVAVGGPTWSVNLGRRDSLTASKTMADSSLPRFTDSVQQLTDSFASKNLTQRDMVALSG
SHTVGQAHCATFRDRVNSNTSDIDSEFGRSLREDLPCPADGSGDGNLAPLDLATPNTFDNSFFKNLVDKKGLLQSDQVLFSGGATDSIVMEYADNTLTFRSDFAAAMVQMGKISPLTGTQ
GQIRTFCNVV

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTCGTTCATCTGTTCTCTTCACTGGTTTCATGACATTCTTGATAATGACTCTGTGTAGCTTGCCATCTCAAGCTCAGCTTTCTGATGAAACCTTCTATGCCTTGTCATGTCCT
GCTGCCGTAGCAACTATTAGTACAACTGTTAGTCTAGCCGTCTTGAATGACACCAGAATGGCTGCTTCGCTCATTCGTCTTCATTTCCATGATTGCTTTGTCCAGGTAATTACAAAATCA
CTTGATATTTGTCTAATTATTAAGCTGAATTAGCTGTCATCTTATGAATTTTGTATTTCAGGGGGTTGTGATGCCTCAGTTTTGCTGGATGACACGCCATCAATGATTGGAGAGAAAACT
TCAATCTTCAATGACAAATCTCTCAGAGGATTTGAAGTCATAGATGATATCAAATCTCAGTTGCAGAGCCTATGTCCAGGAGTTGTTTCATGTGCTGATATTGTTACAGTAGCAGCTCGT
GATGCATCTGTTGCTGTAAGTGACCATCATTTTAACCTCTTCAATTATTAGGCTTATTCTAGCTATATATTTATTCATATACTCTCTCATACATAGGTGTTGGTGGACCGACATGGTCTG
TGAATCTTGGAAGAAGAGACTCCCTCACCGCAAGCAAAACCATGGCTGATAGCAGCCTTCCTCGCTTTACAGATTCTGTTCAGCAACTCACTGACTCGTTCGCTAGCAAGAATCTAACTC
AAAGAGATATGGTTGCCCTCTCAGGTTTGTGCCTTGGTGATTAACATATATATAGTTTCAAATATTATTATATGTGGATAATGTAATTTCTAGATATACTATTTGGCATCATATAGGGGG
TCGCATACAGTTGGGCAAGCACATTGCGCCACCTTCCGTGATAGAGTTAACAGCAACACGAGTGATATTGATTCTGAGTTTGGTAGGAGTCTAAGGGAAGATCTTCCATGCCCAGCTGAT
GGCTCAGGGGATGGAAATCTTGCACCATTGGATTTAGCGACTCCCAATACTTTTGATAACAGTTTCTTCAAGAACCTTGTTGATAAAAAGGGTCTTCTTCAATCAGATCAGGTTCTTTTC
AGCGGTGGTGCTACAGACAGCATTGTTATGGAGTACGCGGACAACACTTTAACCTTCAGATCTGATTTTGCAGCGGCCATGGTTCAGATGGGAAAAATAAGCCCCTTAACTGGTACTCAA
GGCCAGATACGCACTTTCTGTAATGTCGTCAAC

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCTCGTTCATCTGTTCTCTTCACTGGTTTCATGACATTCTTGATAATGACTCTGTGTAGCTTGCCATCTCAAGCTCAGCTTTCTGATGAAACCTTCTATGCCTTGTCATGTCCT
GCTGCCGTAGCAACTATTAGTACAACTGTTAGTCTAGCCGTCTTGAATGACACCAGAATGGCTGCTTCGCTCATTCGTCTTCATTTCCATGATTGCTTTGTCCAGGGTTGTGATGCCTCA
GTTTTGCTGGATGACACGCCATCAATGATTGGAGAGAAAACTTCAATCTTCAATGACAAATCTCTCAGAGGATTTGAAGTCATAGATGATATCAAATCTCAGTTGCAGAGCCTATGTCCA
GGAGTTGTTTCATGTGCTGATATTGTTACAGTAGCAGCTCGTGATGCATCTGTTGCTGTTGGTGGACCGACATGGTCTGTGAATCTTGGAAGAAGAGACTCCCTCACCGCAAGCAAAACC
ATGGCTGATAGCAGCCTTCCTCGCTTTACAGATTCTGTTCAGCAACTCACTGACTCGTTCGCTAGCAAGAATCTAACTCAAAGAGATATGGTTGCCCTCTCAGGGTCGCATACAGTTGGG
CAAGCACATTGCGCCACCTTCCGTGATAGAGTTAACAGCAACACGAGTGATATTGATTCTGAGTTTGGTAGGAGTCTAAGGGAAGATCTTCCATGCCCAGCTGATGGCTCAGGGGATGGA
AATCTTGCACCATTGGATTTAGCGACTCCCAATACTTTTGATAACAGTTTCTTCAAGAACCTTGTTGATAAAAAGGGTCTTCTTCAATCAGATCAGGTTCTTTTCAGCGGTGGTGCTACA
GACAGCATTGTTATGGAGTACGCGGACAACACTTTAACCTTCAGATCTGATTTTGCAGCGGCCATGGTTCAGATGGGAAAAATAAGCCCCTTAACTGGTACTCAAGGCCAGATACGCACT
TTCTGTAATGTCGTCAAC

Retrieve as FASTA