Entry information : SiPrx03 (Si001958m)
Entry ID 9437
Creation 2011-07-03 (Qiang Li)
Last sequence changes 2011-12-12 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: SiPrx03 (Si001958m)
Name (synonym) SiPrx03 (Si001958m)
Class Class III peroxidase    [Orthogroup: Prx050]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx03
start..stop
S start..stop
ZmPrx143 608 0 4..362 8..362
BdiPrx67 586 0 7..361 9..354
TaPrx78-1D 566 0 6..362 69..416
TaPrx78-1B 558 0 6..362 9..356
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9437' 'join(14031882..14032100,14033878..14034747)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14031882..14032100 217 N° 2 14033878..14034747 868  
join(14031882..14032100,14033878..14034747)


exon

Literature and cross-references SiPrx03 (Si001958m)
DNA ref. Phytozome 12:   scaffold_5 (14031882..14034747)
Protein sequence: SiPrx03 (Si001958m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   362
PWM (Da):   %s   38352.24 Transmb domain:   %s   i5-27o
PI (pH):   %s   6.88
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKGFFFFFTTSALAILALLPVVAIGAGLKVGFYNKSCPSAESLVQQAVAAAFKNNSGIAAGLIRLHFHDCFVRGCDGSVLIDTTSNNTAEKDAPPNNPSLRGFEVIDAAKKAIEARCPKV
VSCADILAFAARDAVALSGNNLTYKVPAGRRDGRISRDTDASNNLPSPLSNATELVGNFTVKNLTAEDMVVLSGAHTVGRSHCSSFTNRLYGFSNASDVDPTISSAYAFLLRGICPSNSS
QFFPNTTTEMDLMTPAVLDNKYYLGLANNLGLFTSDQALLTNATLKKSVDEFVKSENRWRSKFAKAMVKMGNIEVLTGTQGEIRLNCRVINSGSSSAGIELQMATGSGGDDSAEEFTDIA
TN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from phytozome (3' end is missing).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGGGCTTCTTCTTCTTCTTCACCACCTCTGCACTTGCCATCCTTGCGCTCCTCCCGGTCGTCGCCATAGGCGCCGGCCTCAAGGTCGGGTTCTACAACAAGTCCTGCCCGTCGGCG
GAGTCGCTGGTGCAGCAGGCGGTGGCTGCCGCCTTCAAGAACAACAGTGGCATCGCCGCCGGCCTCATCCGCCTGCACTTTCATGACTGCTTCGTCAGG
GGGTATGTGCTCTCGTACATG
AATGCTTTGTAATACAAGTTGTACACTTGTACTATTTTTACAAACAGATGATCGTGCTGATCGACTGGACGAGCACCCAGCAAACATTATCTGTACTTTAACTTTAAATGAACTAATGAA
TACAGTTAGCAAGAATTAGGTGGATGATAAATAGAGTTAGCTACCCACATCTCATTTACAATTTGCTTAGGTACCGTTGACTAGTGCGTTCCGACTGGCCGAGTCTTTCTTGTGGACATC
GGTTACTTTTACACACATGCATCTCGGGTGCTTTAGTTGTTTCTGGTCCCAGACGTGTGTGTGAGGTATGGGTATGGCGACGAAAAAGATGACCATGACTATGCATAGCATAGTGGCTAG
CAGTAGCACTGCACATATCCATTCACAAAATGTGTAGCCGGCCGGAAAATTCAAGTCTGATCCACATCCACTGTTTGCGTAGCTGCACTTGTGACTTAGTTACTGTTACTGATGAGCGAT
GACGGTCCATATGATTCCTTTGTAGTATGCATGTTGTGTATCTTTAAGCAAAGCATAGTAGAAAGAGGTCCTGCCAGAATAACAAATTTCGCAAAGCAAGGAACAAGACAGATCGGCAAT
CTATCATTTTTGCAGCAGTCTCTTGCAAATAAAAGGGAGTGCCAGTGTTTGAAGAATATAGACGACATATATGAAACTTTATCCCTTTCGAGAAAGAAGCACACATGGACTAGTTAATTG
CAACAGTTATTGAGCTGCTGGTTAAGTACTCCATGCATGCCTCCGTTATCATGAGCTCTATTTGCATACTTTCCTTTATACTCAGAATAGTTTTCATTTGGTAAATGGCTGAACAACATG
TTTCAGACATCAGTAAGAACTGTAACATCAGCTTTTTGCTAAAAAATATAATTAATACGAAAGACAATAATAAAAATGAATGGATACGGTTAGGAACCAAAATCGCATTTATTTTTGTTT
AGGTACCGTGTTGACTAGTGCTTGCCGACTGCCCAACTCATAGATGTTGCGGCACACATGTATCTCGATGGCTGTACTTGTTGCTGGGCCCAGGCAGACGTGTGTACTTGTATGGCAACT
ACAAAGACAGAGATAGATGACCTTGACCATGACCTTGTGGCGACCACTGCAAATGCATTTCTCTTGAAACAACGCCTAGCAGTTGCTTGCTGCTAATACTGTGGAGATTTAGTAGTCCCT
TGCTAAAAACCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATGTAGTTGGAAAATTTTATGTTCATGTCTAATCCACATCTAGCTTACCTTCAAGCAACCTAATAAGATGACACATGTGCA
CAAACAATTCCTAGAAAGGACGACCAGTAATCTTTAGCTGGACTTGCAGGGGGAAAAAAAAGCTAAGTACCTGCAGCATGAACCTAATGCAATTCAGAGAGATGAGCGTCAGTTTTGTTT
GTGTTATCATGAACTTATGATGCAAGTAACTAAGATCATGTCAAATAGTAAAAATTTCATGGCGGACGCGTTACGCAGGGCTGCGACGGCTCCGTGCTGATCGACACGACGTCGAACAAC
ACGGCGGAGAAGGACGCGCCCCCGAACAACCCCAGCCTGCGTGGCTTCGAGGTCATCGACGCCGCCAAGAAGGCCATCGAGGCGCGGTGCCCCAAGGTCGTCTCCTGCGCCGACATCCTC
GCCTTCGCGGCGCGCGACGCCGTCGCTCTGTCGGGGAACAACCTCACCTACAAGGTACCCGCGGGGCGGCGCGATGGGCGGATCTCCAGGGACACGGACGCCAGCAACAACCTCCCTTCC
CCGCTCTCCAACGCCACCGAGCTCGTCGGCAACTTCACCGTCAAGAACCTCACCGCCGAGGACATGGTGGTGCTCTCCGGCGCGCACACCGTCGGCCGTTCCCACTGCTCCTCCTTCACC
AACCGCCTCTATGGCTTCAGCAACGCCAGCGACGTGGACCCCACCATCAGCTCCGCCTACGCGTTCCTGCTCAGGGGCATCTGCCCCTCCAACAGCAGCCAGTTCTTCCCCAACACGACC
ACGGAGATGGACCTCATGACGCCGGCGGTGCTCGACAACAAGTACTACCTGGGGCTCGCCAACAACCTGGGGCTCTTCACGTCGGACCAGGCGCTGCTCACCAACGCCACGCTCAAGAAG
TCCGTCGACGAGTTCGTCAAGAGCGAGAACAGGTGGAGGAGCAAGTTCGCCAAGGCCATGGTGAAGATGGGCAACATCGAGGTGCTCACGGGGACGCAGGGGGAGATCAGGCTCAACTGC
AGGGTCATCAACAGCGGCAGCAGCTCGGCCGGGATCGAGCTTCAGATGGCGACAGGCTCCGGTGGCGACGACTCTGCCGAAGAATTCACTGACATTGCAACGAACTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGGGCTTCTTCTTCTTCTTCACCACCTCTGCACTTGCCATCCTTGCGCTCCTCCCGGTCGTCGCCATAGGCGCCGGCCTCAAGGTCGGGTTCTACAACAAGTCCTGCCCGTCGGCG
GAGTCGCTGGTGCAGCAGGCGGTGGCTGCCGCCTTCAAGAACAACAGTGGCATCGCCGCCGGCCTCATCCGCCTGCACTTTCATGACTGCTTCGTCAGG
GGCTGCGACGGCTCCGTGCTG
ATCGACACGACGTCGAACAACACGGCGGAGAAGGACGCGCCCCCGAACAACCCCAGCCTGCGTGGCTTCGAGGTCATCGACGCCGCCAAGAAGGCCATCGAGGCGCGGTGCCCCAAGGTC
GTCTCCTGCGCCGACATCCTCGCCTTCGCGGCGCGCGACGCCGTCGCTCTGTCGGGGAACAACCTCACCTACAAGGTACCCGCGGGGCGGCGCGATGGGCGGATCTCCAGGGACACGGAC
GCCAGCAACAACCTCCCTTCCCCGCTCTCCAACGCCACCGAGCTCGTCGGCAACTTCACCGTCAAGAACCTCACCGCCGAGGACATGGTGGTGCTCTCCGGCGCGCACACCGTCGGCCGT
TCCCACTGCTCCTCCTTCACCAACCGCCTCTATGGCTTCAGCAACGCCAGCGACGTGGACCCCACCATCAGCTCCGCCTACGCGTTCCTGCTCAGGGGCATCTGCCCCTCCAACAGCAGC
CAGTTCTTCCCCAACACGACCACGGAGATGGACCTCATGACGCCGGCGGTGCTCGACAACAAGTACTACCTGGGGCTCGCCAACAACCTGGGGCTCTTCACGTCGGACCAGGCGCTGCTC
ACCAACGCCACGCTCAAGAAGTCCGTCGACGAGTTCGTCAAGAGCGAGAACAGGTGGAGGAGCAAGTTCGCCAAGGCCATGGTGAAGATGGGCAACATCGAGGTGCTCACGGGGACGCAG
GGGGAGATCAGGCTCAACTGCAGGGTCATCAACAGCGGCAGCAGCTCGGCCGGGATCGAGCTTCAGATGGCGACAGGCTCCGGTGGCGACGACTCTGCCGAAGAATTCACTGACATTGCA
ACGAACTAG

Retrieve as FASTA