Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
328 (295) |
| PWM (Da): |
35219.14 (31524.2) |
Transmb domain: |
i12-34o |
| PI (pH): |
9.53 (9.34) |
Peptide Signal: |
cut: 34 range:34-328 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MIGNKFALTN MAFFRSLLLI ILIVAVSSCQ TNAQLSPNYY SSTCPQALSI VKAEVAAAIK NETRIGASLL RLHFHDCFVN GCDGSVLLDD NSTFIGEKTA VPNNNSARGF NVVDNIKARL
EKACPGVVSC ADILAIAARD SVVRLGGPSW KVRLGRRDST SASRSAANAS IPPPTSNLSA LISSFSAQGL SIKNLVALSG AHTIGLARCT SFRSHIYNDS NIDPSFANSL RRICPRSGND
SVLAPLDRQT PTCFDNLYHK NLLEKKGLLH SDQEIFNGSS LTDGLVKMYA ADTSLLFKEF AKSMIKMGNI KPLTGNAGEI RINCRKAN*
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic (3 introns) and 3 ESTs. |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AACATGTTTC CATACTTGCA AGAAATTTTA TTAAAAAAAA GTTATCTGTC TGTTGTTTGA AGTGAGTGAG TGATTGAGAT GTTCATATAA TTTAAATTTG TACTATCCTT TTTTTTTCTC
TCCGTTTTTA ATACAATGAT TATGCAATAA AGGAGCACTT ATACTTGTAA GATATTTGAT TTCAAATAAA AATAATAATT AGAGTTTTTT AATTCGAGTT ATTGAGCAAG TCAAATTTGG
ATATCTCAAT AATTGACTTA AATAGTTGAC GAAACTAGCT GAGGTTTATT TTAGAAGTAT TAGAAAAACT CAATTTAATC TTGACCTGAA AATCAAATAG AAGTAACTAA GTTCGAAGTT
AAATGTGAAA ATCGAACTTA TATTTTATCA AACAAATGAA ATTTAATTGA ACCAAATCAA AGCAATTCAA ACGGCTCAGT TTTTATGTCC GACCAACTTC AAATTTTAGA ATTAGAACTT
ACACCAAATT TTTAAGTTTC AAACTTCTTA TAACTTCACC TTTACATCCC CAATTAAAAA TCAACCCAAA ATCTCAGGTT AACCCATCTT TGAAACAATT GAGCGAACTG AATGTTAGAA
TTTCTCTATC AAAAAAAAAA AGCACGATTA ACTTTTACAG GATCCAACTG ATAGGAAGAT TAGATGAGCA AAATAAGTTT ACTTTGGAAA CTGATGAAGA AAGCAGAAAT ATAATAAAAT
AAAGTAATGT TTTGCTTCAA ATGAGCTCCA GTAACAATCC TTTACTACTT TTATTATAAT AGACAGAAAG GAATAACCCA GAGCCTACTT AGCCTCAGTA TAGGGTAAAA TGCTTCTTTC
TGTAGGCTCC ACCCCTCAAT TCCAAGCAAA CCACAAAGCT ACATATACTT ATAATTAATA TTAAATTTTA AATAAATGTA ATGGCCGACT GGCACAATCA AAATGTTGCT TTGCCCTTTG
TTGCTTCCAA TTTTCCTTTT CCTAAAGTAT ACTTTCTTTA
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGATTGGCA ACAAATTTGC ATTAACCAAC ATGGCTTTCT TTCGTTCACT GTTACTAATT ATTTTGATTG TTGCTGTTTC TTCATGTCAA ACCAATGCCC AACTCTCTCC TAATTACTAT
TCATCCACTT GCCCGCAAGC TTTGTCTATT GTGAAGGCCG AAGTTGCCGC TGCTATAAAG AACGAAACTC GCATCGGAGC TTCGTTGCTG AGATTACATT TCCACGACTG CTTCGTTAAC
GTGAGTACTC TTCATTTTTC TTGAAATACC TGTGTTTGAC AATCCGACAC TGAGCCTTCA TGATGAACAG GGTTGTGATG GGTCGGTACT TTTGGACGAT AACTCGACGT TTATAGGTGA
GAAAACCGCG GTTCCTAACA ATAACTCGGC GAGAGGGTTC AACGTCGTCG ACAACATCAA AGCTCGGCTG GAGAAAGCGT GTCCTGGAGT TGTATCCTGC GCTGATATTC TCGCCATTGC
TGCTCGTGAT TCGGTTGTTC GGGTAAGTAC ACTTGGTACC TTATTGCAGT CAATAATGTT ATGAATTGAT TATTTTCGTG GTGTATGCAG TTAGGGGGTC CGTCATGGAA GGTAAGGTTG
GGAAGAAGGG ATTCGACAAG CGCTAGCAGA AGTGCCGCAA ATGCCTCTAT TCCACCACCA ACCTCTAATC TAAGCGCTCT TATTTCAAGC TTCTCAGCTC AGGGCCTCTC AATAAAAAAC
CTTGTAGCAC TTTCTGGTAA TCCAAATGTC ATTTTCGGAT AACTCATTTT AGCATAGACA GTTAGACACA TCATGTTTCA TTTTCGGATT CGCAGGTGCA CACACCATTG GCCTCGCCCG
CTGCACATCA TTTCGGTCAC ACATTTACAA CGACTCCAAT ATAGACCCCT CCTTTGCCAA CTCGTTGCGA CGGATTTGCC CGAGAAGCGG CAACGATAGT GTGCTCGCCC CTCTCGACCG
TCAAACACCA ACTTGTTTTG ATAACTTATA CCACAAGAAT TTGTTGGAGA AGAAGGGTTT GCTTCATTCA GATCAAGAGA TCTTCAATGG AAGTTCTTTA ACTGATGGTT TGGTTAAAAT
GTATGCAGCC GATACTTCAT TATTGTTCAA GGAATTTGCC AAGTCTATGA TCAAGATGGG AAACATTAAA CCTCTCACAG GAAATGCTGG GGAAATCAGA ATCAACTGTC GGAAAGCAAA
TTGA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGATTGGCA ACAAATTTGC ATTAACCAAC ATGGCTTTCT TTCGTTCACT GTTACTAATT ATTTTGATTG TTGCTGTTTC TTCATGTCAA ACCAATGCCC AACTCTCTCC TAATTACTAT
TCATCCACTT GCCCGCAAGC TTTGTCTATT GTGAAGGCCG AAGTTGCCGC TGCTATAAAG AACGAAACTC GCATCGGAGC TTCGTTGCTG AGATTACATT TCCACGACTG CTTCGTTAAC
GGTTGTGATG GGTCGGTACT TTTGGACGAT AACTCGACGT TTATAGGTGA GAAAACCGCG GTTCCTAACA ATAACTCGGC GAGAGGGTTC AACGTCGTCG ACAACATCAA AGCTCGGCTG
GAGAAAGCGT GTCCTGGAGT TGTATCCTGC GCTGATATTC TCGCCATTGC TGCTCGTGAT TCGGTTGTTC GGTTAGGGGG TCCGTCATGG AAGGTAAGGT TGGGAAGAAG GGATTCGACA
AGCGCTAGCA GAAGTGCCGC AAATGCCTCT ATTCCACCAC CAACCTCTAA TCTAAGCGCT CTTATTTCAA GCTTCTCAGC TCAGGGCCTC TCAATAAAAA ACCTTGTAGC ACTTTCTGGT
GCACACACCA TTGGCCTCGC CCGCTGCACA TCATTTCGGT CACACATTTA CAACGACTCC AATATAGACC CCTCCTTTGC CAACTCGTTG CGACGGATTT GCCCGAGAAG CGGCAACGAT
AGTGTGCTCG CCCCTCTCGA CCGTCAAACA CCAACTTGTT TTGATAACTT ATACCACAAG AATTTGTTGG AGAAGAAGGG TTTGCTTCAT TCAGATCAAG AGATCTTCAA TGGAAGTTCT
TTAACTGATG GTTTGGTTAA AATGTATGCA GCCGATACTT CATTATTGTT CAAGGAATTT GCCAAGTCTA TGATCAAGAT GGGAAACATT AAACCTCTCA CAGGAAATGC TGGGGAAATC
AGAATCAACT GTCGGAAAGC AAATTGA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAAATCTTTA CGCATTTACA CACTATAAAA AGGGCCTCAT TTCATTTCCA ATATGATTGG CAACAAATTT GCATTAACCA ACATGGCTTT CTTTCGTTCA CTGTTACTAA TTATTTTGAT
TGTTGCTGTT TCTTCATGTC AAACCAATGC CCAACTCTCT CCTAATTACT ATTCATCCAC TTGCCCGCAA GCTTTGTCTA TTGTGAAGGC CGAAGTTGCC GCTGCTATAA AGAACGAAAC
TCGCATCGGA GCTTCGTTGC TGAGATTACA TTTCCACGAC TGCTTCGTTA ACGGTTGTGA TGGGTCGGTA CTTTTGGACG ATAACTCGAC GTTTATAGGT GAGAAAACCG CGGTTCCTAA
CAATAACTCG GCGAGAGGGT TCAACGTCGT CGACAACATC AAAGCTCGGC TGGAGAAAGC GTGTCCTGGA GTTGTATCCT GCGCTGATAT TCTCGCCATT GCTGCTCGTG ATTCGGTTGT
TCGGTTAGGG GGTCCGTCAT GGAAGGTAAG GTTGGGAAGA AGGGATTCGA CAAGCGCTAG CAGAAGTGCC GCAAATGCCT CTATTCCACC ACCAACCTCT AATCTAAGCG CTCTTATTTC
AAGCTTCTCA GCTCAGGGCC TCTCAATAAA AAACCTTGTA GCACTTTCTG GTGCACACAC CATTGGCCTC GCCCGCTGCA CATCATTTCG GTCACACATT TACAACGACT CCAATATAGA
CCCCTCCTTT GCCAACTCGT TGCGACGGAT TTGCCCGAGA AGCGGCAACG ATAGTGTGCT CGCCCCTCTC GACCGTCAAA CACCAACTTG TTTTGATAAC TTATACCACA AGAATTTGTT
GGAGAAGAAG GGTTTGCTTC ATTCAGATCA AGAGATCTTC AATGGAAGTT CTTTAACTGA TGGTTTGGTT AAAATGTATG CAGCCGATAC TTCATTATTG TTCAAGGAAT TTGCCAAGTC
TATGATCAAG ATGGGAAACA TTAAACCTCT CACAGGAAAT GCTGGGGAAA TCAGAATCAA CTGTCGGAAA GCAAATTGAA ACATGTTTCC ATACTTGCAA GAAATTTTAT TAAAAAAAAG
TTATCTGTCT GTTGTTTGAA GTGAGTGAGT GATTGAGATG TTCATATAAT TTAAATTTGT ACTATCCTTT TTTTTTCTCT CCGTTTTTAA TACAATGATT ATGCAATAAA GGAGCACTTA
TACTTGTAAG ATATTTGATT TCAAATAAAA ATAATAATTA GAGTTTTTTA ATTCGAGTTA TTGAGCAAGT CAAA
|
Retrieve as FASTA
|
|
