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Entry information : GsppVP01(VP1-atypical)
Entry ID 9693
Creation 2011-11-15 (Christophe Dunand)
Last sequence changes 2011-11-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-05-10 (Catherine )
Peroxidase information: GsppVP01(VP1-atypical)
Name GsppVP01(VP1-atypical)
Class Versatile peroxidase    [Orthogroup: VP001]
Taxonomy Fungi/Metazoa; Fungi; Basidiomycota; Basidiomycota
Organism Ganoderma sp. 10597 SS1    [TaxId: 767862 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GsppVP01
start..stop		 S start..stop
GapCIIBA01 654 0 1..364 1..364
GauCIIBA01 653 0 1..364 1..364
GfCIIBA01 625 0 1..364 1..364
TvVP01 551 0 1..364 1..364
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2735416..2735532 115 N° 2 2735317..2735360 42 N° 3 2735211..2735256 44 N° 4 2735091..2735149 57
N° 5 2735025..2735038 12 N° 6 2734843..2734963 119 N° 7 2734552..2734783 230 N° 8 2734320..2734489 168
N° 9 2734225..2734262 36 N° 10 2733932..2734144 211 N° 11 2733849..2733873 23 N° 12 2733772..2733787 14
complement(join(2733772..2733787,2733849..2733873,2733932..2734144,2734225..2734 262,2734320..2734489,2734552..2734783,2734843..2734963,2735025..2735038,2735091. .2735149,2735211..2735256,2735317..2735360,2735416..2735532))


exon

Literature and cross-references GsppVP01(VP1-atypical)
DNA ref. JGI genome:   scaffold_3 (2735532..2733772)
Protein sequence: GsppVP01(VP1-atypical)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   364 (346)
PWM (Da):   %s   37924.29 (36116.3)  
PI (pH):   %s   4.12 (4.08) Peptide Signal:   %s   cut: 19 range:19-364
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFSKAFLTLVVAAASVTAAVPRMGKRATCSNGKTVNNDACCVWFDVLDDIQENLFHGGQCGEDAHEALLTFHDAIGFSPALTAAGQFGGGGDGSIIAHSDVELTYPANNGVDEIVEASRPIAIKHNVSFGDFIQFAGAVGTANCNGGPQLSFFAGRSND
SQPAPPNLVPLPSDSADSILSRFSDAGFDAVEVVWLLVSHTVGSQHTVDSIPGAPFDSTPSDFDAQFFVETMLNGTLVPGNGLQDGEVNSPYPGEFRLQSDFALSRDSRTACEWQKMADR
ANMLAKFEGVMLKMSLLGFDQSALTDCSDVIPTATGTVQDPFLPAGLTVDDLQPACSSSAFPTVSTVAGAATSIPAVPMDS

Retrieve as FASTA  
Remarks Complete sequence from genomic (11 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCTCCAAGGCTTTCCTCACTCTCGTCGTCGCCGCTGCGTCGGTCACCGCCGCCGTCCCGCGGATGGGCAAGCGTGCCACTTGCAGCAACGGCAAGACGGTCAACAACGATGCGGTA
CACCCCGTTCTTGCCATCCGTGTTTGGCCTCGTAGCTGATGATCGTGCACAGTGTGCTGTGTCTGGTTCGATGTCCTCGACGACATTCAAGAGAACCTGTAAGTATTGAGCCGCCTTGTT
CTGTGGATAGTGATCGTCGGTCTCACTCCGCTTCGCAGCTCTTCCATGGCGGGCAGTGCGGGGAAGATGCTCATGAAGCCCTGAGGGTATGTATATCCTAATATCCCTTCGCCGCCACCG
GACAGCTCAATAATTTCGGTTTCGTAGCTCTTACCTTCCATGACGCGATTGGTTTCTCTCCTGCTCTGACTGCCGCAGGCCAATTCGGGTGAGTTTTGCTCCACCCTCCATTTACATTCA
TTTGCTGACTATCAGAACAGCGCGGCGGAGGTGCTGGTGAGTGCCGATAGGCTATCCTTTTCCACGTATCATGTCTAAATGCTATACATTGCCACAGATATGGTTCGATCATTGCGCACT
CCGATGTGGAGTTGACATATCCCGCCAACAACGGTGTGGACGAAATCGTCGAGGCTTCCCGCCCGATCGCCATTAAGCACAACGTCTCCTTCGGCGACTTGTAAGCTTCCTCTACCGGTG
ACGCGCCCAACCACCGTATGCTGATGACCATCATGATAGCACATTCAATTCGCAGGCGCCGTTGGGACTGCGAACTGCAACGGCGGGCCCCAGCTCTCGTTCTTCGCTGGTCGGTCCAAC
GACTCTCAGCCAGCTCCTCCGAACCTCGTCCCGCTCCCGTCGGACAGCGCCGACTCGATCCTCTCTCGCTTCTCCGATGCGGGCTTCGACGCGGTCGAGGTCGTATGGCTCCTGGTCTCT
CACACGGTCGGCTCCCAGCACACGGTTGACCCAGTCAGTTTTCTCCGTCTCCATCCCTCCATGATGATGCTGATGCCCGGTTTCGACCCTGTCAGAGAGCATCCCGGGCGCGCCGTTCGA
CTCGACGCCGTCGGACTTCGACGCCCAGTTCTTCGTTGAGACGATGCTGAACGGCACGCTCGTCCCCGGTAACGGCCTGCAGGACGGCGAAGTGAACTCGCCCTACCCCGGCGAGTTCCG
CCTCCAGTCCGACTTCGCCCTCTCTCGGTGAGTGGTGTCCAAACGTGCGCCGCCGTCCTCACCGAGCTCACACGGTCTCAACAGCGCGACTCTCGGACCGCCTGCGAGTGGCAAAAGATG
ATCGGTACGTCATGCTCTTCCTCCCCCATCTAGAGTTCCGACGTCCTCGGCCCGAGTCCCGTGTCTCACTCAGTCTTTCCACAGCCCCGACCGTGCGAACATGCTGGCGAAGTTCGAGGG
CGTGATGCTGAAGATGTCGCTGCTCGGCTTCGACCAGTCCGCGCTCACCGACTGCTCCGACGTGATCCCCACCGCGACCGGCACGGTCCAGGACCCGTTCCTTCCCGCGGGCCTGACGGT
GGACGACCTCCAGCCTGCGTGCTCGTCGAGCGCCTTCCCCACGGTGTCCACCGTTGCTGGTACGTCTGTCGAACATTCGATCTGGGAATCTCACCTTCTGACGACTTGGATGTATAGGTG
TGCCGCCACCTCTATCCCTGCCGTGTAAGTGTCTCCCGTTATGTTAGAAGATCGGCCGCTTACACTTAAACTTGGTGGTGTGTAGGCGCCCATGGACTCTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCTCCAAGGCTTTCCTCACTCTCGTCGTCGCCGCTGCGTCGGTCACCGCCGCCGTCCCGCGGATGGGCAAGCGTGCCACTTGCAGCAACGGCAAGACGGTCAACAACGATGCGTGC
TGTGTCTGGTTCGATGTCCTCGACGACATTCAAGAGAACCTCTTCCATGGCGGGCAGTGCGGGGAAGATGCTCATGAAGCCCTGAGGCTTACCTTCCATGACGCGATTGGTTTCTCTCCT
GCTCTGACTGCCGCAGGCCAATTCGGCGGCGGAGGTGCTGATGGTTCGATCATTGCGCACTCCGATGTGGAGTTGACATATCCCGCCAACAACGGTGTGGACGAAATCGTCGAGGCTTCC
CGCCCGATCGCCATTAAGCACAACGTCTCCTTCGGCGACTTCATTCAATTCGCAGGCGCCGTTGGGACTGCGAACTGCAACGGCGGGCCCCAGCTCTCGTTCTTCGCTGGTCGGTCCAAC
GACTCTCAGCCAGCTCCTCCGAACCTCGTCCCGCTCCCGTCGGACAGCGCCGACTCGATCCTCTCTCGCTTCTCCGATGCGGGCTTCGACGCGGTCGAGGTCGTATGGCTCCTGGTCTCT
CACACGGTCGGCTCCCAGCACACGGTTGACCCAAGCATCCCGGGCGCGCCGTTCGACTCGACGCCGTCGGACTTCGACGCCCAGTTCTTCGTTGAGACGATGCTGAACGGCACGCTCGTC
CCCGGTAACGGCCTGCAGGACGGCGAAGTGAACTCGCCCTACCCCGGCGAGTTCCGCCTCCAGTCCGACTTCGCCCTCTCTCGCGACTCTCGGACCGCCTGCGAGTGGCAAAAGATGATC
GCCGACCGTGCGAACATGCTGGCGAAGTTCGAGGGCGTGATGCTGAAGATGTCGCTGCTCGGCTTCGACCAGTCCGCGCTCACCGACTGCTCCGACGTGATCCCCACCGCGACCGGCACG
GTCCAGGACCCGTTCCTTCCCGCGGGCCTGACGGTGGACGACCTCCAGCCTGCGTGCTCGTCGAGCGCCTTCCCCACGGTGTCCACCGTTGCTGGTGCCGCCACCTCTATCCCTGCCGTG
CCCATGGACTCTTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTCGTATCTC GGAGTCACCA GCCAGGTCAC TTACATCCTT GAACCGCCTC GCTATGTTCT CCAAGGCTTT CCTCACTCTC GTCGTCGCCG CTGCGTCGGT CACCGCCGCC GTCCCGCGGA  TGGGCAAGCG TGCCACTTGC AGCAACGGCA AGACGGTCAA CAACGATGCG TGCTGTGTCT GGTTCGATGT CCTCGACGAC ATTCAAGAGA ACCTCTTCCA TGGCGGGCAG TGCGGGGAAG  ATGCTCATGA AGCCCTGAGG CTTACCTTCC ATGACGCGAT TGGTTTCTCT CCTGCTCTGA CTGCCGCAGG CCAATTCGGC GGCGGAGGTG CTGATGGTTC GATCATTGCG CACTCCGATG  TGGAGTTGAC ATATCCCGCC AACAACGGTG TGGACGAAAT CGTCGAGGCT TCCCGCCCGA TCGCCATTAA GCACAACGTC TCCTTCGGCG ACTTCATTCA ATTCGCAGGC GCCGTTGGGA  CTGCGAACTG CAACGGCGGG CCCCAGCTCT CGTTCTTCGC TGGTCGGTCC AACGACTCTC AGCCAGCTCC TCCGAACCTC GTCCCGCTCC CGTCGGACAG CGCCGACTCG ATCCTCTCTC  GCTTCTCCGA TGCGGGCTTC GACGCGGTCG AGGTCGTATG GCTCCTGGTC TCTCACACGG TCGGCTCCCA GCACACGGTT GACCCAAGCA TCCCGGGCGC GCCGTTCGAC TCGACGCCGT  CGGACTTCGA CGCCCAGTTC TTCGTTGAGA CGATGCTGAA CGGCACGCTC GTCCCCGGTA ACGGCCTGCA GGACGGCGAA GTGAACTCGC CCTACCCCGG CGAGTTCCGC CTCCAGTCCG  ACTTCGCCCT CTCTCGCGAC TCTCGGACCG CCTGCGAGTG GCAAAAGATG ATCGCCGACC GTGCGAACAT GCTGGCGAAG TTCGAGGGCG TGATGCTGAA GATGTCGCTG CTCGGCTTCG  ACCAGTCCGC GCTCACCGAC TGCTCCGACG TGATCCCCAC CGCGACCGGC ACGGTCCAGG ACCCGTTCCT TCCCGCGGGC CTGACGGTGG ACGACCTCCA GCCTGCGTGC TCGTCGAGCG  CCTTCCCCAC GGTGTCCACC GTTGCTGGTG CCGCCACCTC TATCCCTGCC GTGCCCATGG ACTCTTGAAC AATGAGTCGC CATCAGGGAC AGCACCCTCA AGTATTGAAT GGCGGGCTGA 
ACAAGTAGTA TATAGCTTTC TCATGTGGTT TATGGTATAT CGGTTTCGAA TGATGGGTTG TTTGTATTGC GGATTTTTAA TGCGATGCGA TGTGTCACCA T 

Retrieve as FASTA