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Entry information : TsPrx58-2 (Thhalv10016025m / ThPrx58-2)
Entry ID 9782
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-18 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-21 (Christophe Dunand)
Peroxidase information: TsPrx58-2 (Thhalv10016025m / ThPrx58-2)
Name (synonym) TsPrx58-2 (Thhalv10016025m / ThPrx58-2)
Class Class III peroxidase    [Orthogroup: Prx099]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsPrx58-2
start..stop		 S start..stop
AlyPrx58 578 0 1..329 1..329
TsPrx58-1 574 0 1..330 1..331
AhalPrx63 567 0 16..330 1..315
AtPrx58 567 0 1..329 1..329
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6860672..6860881 208 N° 2 6860156..6860353 196 N° 3 6859779..6859944 164 N° 4 6859193..6859608 414
complement(join(6859193..6859608,6859779..6859944,6860156..6860353,6860672..6860 881))


exon

Literature and cross-references TsPrx58-2 (Thhalv10016025m / ThPrx58-2)
DNA ref. Phytozome 12:   scaffold_2 (6860881..6859193)
Protein sequence: TsPrx58-2 (Thhalv10016025m / ThPrx58-2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (308)
PWM (Da):   %s   35389.89 (33050.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.68 (7.73) Peptide Signal:   %s   cut: 22 range:22-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MCLSNTVSSLLLSILMYGVLSNAQLSSQFYSKTCPNVTVIARGVIQRASRVDVRLTAKVTRLHFHDCFVNGCDGSVLLDASPAGGVESEKGAFQNAGSLDGFEVIDDIKTAIENVCPGVV
SCADILAIAAEISVSLAGGPSWDVLLGRRDGRTASRADAAAALPLAFDSLDVLSSKFSALNLDTTDLVALSGAHTFGRVQCIVMNNRLHNFSGNNGQSDPSIEPELLQTLRRQCPQGGNL
TTRVNIDHTSPDSFDNDYFKNLQNNRGVIETDQILFSSTGAPTVSLVNRFAKSQRKFFRAFAKSMIKMGNARTLTGSEGEIRRDCRRVN*

Retrieve as FASTA  
Remarks Complete sequence fromm genomic (3 introns). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTGTCTAAGCAATACTGTATCCTCACTTTTGCTCTCCATTTTGATGTATGGAGTTTTGAGTAATGCTCAACTTAGCTCTCAGTTTTACTCCAAGACGTGCCCTAACGTCACAGTCATC
GCTCGGGGTGTAATCCAGCGAGCTAGCCGTGTCGACGTCAGACTTACTGCCAAAGTCACCCGTCTTCACTTTCACGACTGTTTCGTGAACGTAAGATCGATCTACTTCTATTCATTAGCA
TATATATAAATAGATACGTATATGTTTATGATTTTTATTTTTGGTTAACAATGAATGAAACCTGTCGTTTTAATCTGCATGTGATCACAACTAGCATTCGACTATATATTCCGTCAATAA
CCTTGGTCTCATACTGAGAATTTTAGATACTAACGGTCTTTTAAAACCTTTTTTAAAAATATGCATGCCTTTTTGGTTCTTATCTAATCATTAAATAAGAAACGTATAGGTGGCATAGAA
TTTAATTTTGTCAAGAAAACATTGACCTCAAAGTGTGTGAACACACAGGGGGGTGTGATGGTTCGGTTCTATTGGATGCATCTCCTGCGGGTGGAGTGGAGAGTGAAAAGGGAGCTTTCC
AAAACGCTGGTTCTCTTGACGGATTCGAAGTGATCGATGATATCAAAACCGCCATCGAGAACGTTTGTCCTGGAGTTGTCTCTTGTGCCGATATTCTCGCTATCGCAGCTGAAATCTCTG
TCTCATTGGTTAGTAAGATGATTCTTGAAATTTTAGTGCTTTTCAGATCCCTTTTTTTATATATTTTATATCAGCAACATGCATCGTGCATGTTTAATGAAAAAATAATAACACTACTAC
GTACAAACCACTAAATTTCTATGTCATGATCTCATATACTGATTTGTTTTAGTCTACGAAACATTGTGATATAATTAATTGAATAATTATATCATTTAGGCGCGGGAGGGCCATCATGGG
ACGTATTGTTAGGAAGGAGAGATGGTCGGACGGCGAGCCGTGCGGATGCGGCGGCTGCTCTTCCACTAGCATTTGACTCTCTCGATGTTCTCTCTTCTAAATTCTCCGCACTTAATCTTG
ACACTACCGATCTCGTGGCTTTATCCGGTAATAATCTTTCGCATCTTAACTCTTTTTTTTTTCGGTTTCTTATAAAAAAAAAATTCATTGGTCATCTTGAAGAAGTATCATAAAACTTTA
TACCAAGGGGCCCTCAATATATCTAGTACTTTGCTACAACATATCTAAACGGATTATGAATCATAATACATGTACAGGTGTGCTCATACCTTCGGGAGAGTTCAGTGTATAGTGATGAAC
AATCGTCTACACAACTTTAGTGGTAACAATGGACAGTCCGACCCGAGTATTGAACCGGAATTATTGCAAACGTTGCGACGACAATGCCCGCAAGGTGGAAATCTCACCACGAGGGTCAAT
ATTGATCATACGAGTCCTGACTCATTCGACAACGACTATTTCAAGAACCTTCAAAACAACCGCGGAGTCATTGAAACAGATCAAATCTTGTTCTCTTCGACAGGAGCGCCTACTGTGTCT
TTGGTGAATCGTTTTGCAAAGAGCCAACGTAAGTTCTTTAGAGCTTTTGCTAAATCAATGATCAAAATGGGAAATGCAAGGACTCTCACAGGATCTGAAGGAGAGATTCGTAGAGACTGC
AGACGGGTTAATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTGTCTAAGCAATACTGTATCCTCACTTTTGCTCTCCATTTTGATGTATGGAGTTTTGAGTAATGCTCAACTTAGCTCTCAGTTTTACTCCAAGACGTGCCCTAACGTCACAGTCATC
GCTCGGGGTGTAATCCAGCGAGCTAGCCGTGTCGACGTCAGACTTACTGCCAAAGTCACCCGTCTTCACTTTCACGACTGTTTCGTGAACGGGTGTGATGGTTCGGTTCTATTGGATGCA
TCTCCTGCGGGTGGAGTGGAGAGTGAAAAGGGAGCTTTCCAAAACGCTGGTTCTCTTGACGGATTCGAAGTGATCGATGATATCAAAACCGCCATCGAGAACGTTTGTCCTGGAGTTGTC
TCTTGTGCCGATATTCTCGCTATCGCAGCTGAAATCTCTGTCTCATTGGCGGGAGGGCCATCATGGGACGTATTGTTAGGAAGGAGAGATGGTCGGACGGCGAGCCGTGCGGATGCGGCG
GCTGCTCTTCCACTAGCATTTGACTCTCTCGATGTTCTCTCTTCTAAATTCTCCGCACTTAATCTTGACACTACCGATCTCGTGGCTTTATCCGGTGCTCATACCTTCGGGAGAGTTCAG
TGTATAGTGATGAACAATCGTCTACACAACTTTAGTGGTAACAATGGACAGTCCGACCCGAGTATTGAACCGGAATTATTGCAAACGTTGCGACGACAATGCCCGCAAGGTGGAAATCTC
ACCACGAGGGTCAATATTGATCATACGAGTCCTGACTCATTCGACAACGACTATTTCAAGAACCTTCAAAACAACCGCGGAGTCATTGAAACAGATCAAATCTTGTTCTCTTCGACAGGA
GCGCCTACTGTGTCTTTGGTGAATCGTTTTGCAAAGAGCCAACGTAAGTTCTTTAGAGCTTTTGCTAAATCAATGATCAAAATGGGAAATGCAAGGACTCTCACAGGATCTGAAGGAGAG
ATTCGTAGAGACTGCAGACGGGTTAATTAA

Retrieve as FASTA