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Entry information : TsAPx03-1C(Thhalv10022797m )
Entry ID 9803
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-21 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2023-05-06 (Christophe Dunand)
Peroxidase information: TsAPx03-1C(Thhalv10022797m )
Name TsAPx03-1C(Thhalv10022797m )
Class Ascorbate peroxidase    [Orthogroup: APx2011]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsAPx03-1C
start..stop		 S start..stop
AlyAPx23-2 526 0 2..288 4..292
CrubAPx03-2 521 0 2..289 3..291
BnAPx03-1Aa_other 491 3.69e-178 1..288 1..287
CrubAPx03-1 490 9.72e-178 1..289 1..288
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9803' 'join(2883251..2883363,2883544..2883668,2883989..2884038,2884707..2884772,2884864..2884912,2885110..2885192,2885282..2885361,2885472..2885577,2885737..2885931)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2883251..2883363 111 N° 2 2883544..2883668 123 N° 3 2883989..2884038 48 N° 4 2884707..2884772 64
N° 5 2884864..2884912 47 N° 6 2885110..2885192 81 N° 7 2885282..2885361 78 N° 8 2885472..2885577 104
N° 9 2885737..2885931 193  
join(2883251..2883363,2883544..2883668,2883989..2884038,2884707..2884772,2884864 ..2884912,2885110..2885192,2885282..2885361,2885472..2885577,2885737..2885931)


exon

Literature and cross-references TsAPx03-1C(Thhalv10022797m )
DNA ref. Phytozome 12:   scaffold_11 (2883251..2885931)
Protein sequence: TsAPx03-1C(Thhalv10022797m )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   288
PWM (Da):   %s   31798.18 Transmb domain:   %s   o259-281i
PI (pH):   %s   5.89
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAALVVDAEYLKEVEKARRELRSLIAKKNCAPIMLRLAWHDAGTYDAKSKTGGPNGSIRNETEYSHGANSGLKIALDLCEDVKSKLPKISYADLYQLAGVVAVEVTGGPDISFVPGRKDC
NDCTDEGRLPDANQGFKHLKDVFYRMGLSDKDIVALSGAHTLGRAHPERSGFDGPWTQDPLKFDNSYFVELLKEEESEGLLKLSTDKTLLEVPEFRHYVELYAKDEDAFFRDYAESHKKL
SELGFTPTSSIAKAITDSTVLAHSAVGVAVAAAVVAFGYFYEIRRKMK*

Retrieve as FASTA  
Remarks Complete sequence from genomic. No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCACTCGTAGTTGACGCGGAGTACCTTAAGGAGGTCGAAAAGGCTCGCCGTGAGCTTCGTTCGCTCATCGCTAAGAAGAATTGCGCTCCGATCATGCTCCGATTGGCGCGTAAG
TTTTCATTTCTGTCGTTTTCTTTTTGGCGATTCCCTCGTATTGAGTGCTATGAGGTCTCTTTTCCTGGGAAATTTGAGGAATCTCGCGCTGCTTTGGAATTTTGTTTGCTTTCATGTGCG
ATTTCTGGTTCTTTGCTTTGGTTCACTTGTTGTCGTCTTCTCTGGTTTGTGAAAGGTGGCATGATGCTGGAACCTACGACGCCAAATCGAAGACCGGTGGACCTAATGGATCGATTAGGA
ACGAAACGGAGTACAGTCATGGTGCTAATAGTGGTTTGAAAATCGCTCTCGATCTCTGTGTGGTACGTTTCTCCTTTCGCTTCTTTATGGAGTTTAGATACAGTGACCTTTAGATGATTA
TGTGTTGGCTATGGTTTGACCTGGATTATACAGATTTACTTGTAATGAGATCGTTCTATACTTCTATTAGTAGTCCTGAGGATTTATGAGAAGTTTACATGTTAAACCTGTTAGTGTGTG
TCTTATATGCTTATCAGTTTTAGAGACCTTTGCCTTGTATTCATGTGCTTGTATTATGGTGTCTTATGAGTTACGAATGAAATTTTCAAGAACAGTCTTACTTTTTCTTTTGGAATTTGA
TGTTGATTCTTTGATATTTCAGAGGACGTGAAATCTAAACTTCCCAAGATCAGTTATGCGGACCTATACCAGAGGTAAACTTAAACGAATTTTGACTTGAAGTTTTATGATAACATAAAG
GTTCCTACTGGATTTTAAGACAATAAAACAAAGGCTCGTTTTGTCCAGTTGTGTTGGCTCTATAATTTCCCATCTTGTTTTTTTGTGCTCTTTCTTCGGATTGTCCTGTGACTTTTTACA
AGTTGTTAATCATAAACTCATCAAAAGTGTTTTTAGATCTATTTGGCTGATCGTTGTATGATTGTTGTCCTCAGGGTATAGAAACAGGAAATTGACAATTGTGCTTTGTGGTTAATATCT
TTGGCATATTTGCAATTTGAAGAATTTTCACACTCACACACATGAACAGTAATAGTTTTCTGGTCTCTTGCTTTCACAATTGTTCTTTTAAGTAAAGTATATTGATGGTGTCTCAATTAT
CGAGGAAGCTTAACAAAAACAGTCAAAACCATTTCCGTGGTAGCCTGCATGGAAATACACTTCACCAAGGACCACAAATGAAAAAAGTGCCACTTTATCTTTGACTGTGAATTTGTGAAA
AGAATCCTGAATATAGCATTGTCAATAAGGCATGTAAACATTTCTGTTGTTTGCCTTTAACTATTCACTCATCAATGCTATTCTATCCTGGAATTTACAGACCTTACATTTTCGCTCGAA
ATTGATTCTGTCATATTTTCAGCTTGCTGGCGTGGTAGCGGTTGAAGTTACTGGTGGACCTGACATCAGTTTTGTTCCTGGAAGAAAAAAGTAATATTTTCTCAGCTACTAAGATGAATG
GTATTACAGTTTACCGCCAAATACAATTTAACTATATTACTTGTATGTTTCTCTCTTATAGGATTGTAATGACTGCACCGACGAAGGAAGACTTCCTGATGCTAATCAAGAGGTAGGATG
ATTTTTTTTTCCCAATTATTACAAACACCAAAGTGAATTACTTAAATGAAAGACCCCTAATGTACTTAGTATCTGAGGAGCAAATAAATAATGGAAGATGATCGCATATAGTACTTGGTG
TTGCCCCATGTACAGTATATTCTTTCCACTATGAGTGTTTGAAGTTATGTCTGCTAATTTTGCATTTAGGTTTCAAACATCTTAAAGATGTTTTCTACCGAATGGGACTGTCTGATAAAG
ATATTGTGGCACTCTCAGGGGCTCATACTCTGTGGTAAATTCTTTGTTTCACAATTCACATTTGTCGTTTAGTATTAAATAAACATAGCTGTGTTGGGGTCTTAATAAAATTCTGATGTT
TAGGGAAGGGCTCATCCAGAGAGATCAGGTTTCGATGGACCATGGACTCAAGATCCTCTCAAGTTTGATAACTCATACTTTGTGTGTAAGATCATCTTAAGTCATGGACAGTTTTTTTTT
TTTTGTTGTTGAGGACTACAAATAGTTGTTCTCACTTCTCACTGATTACTGGACTTTGATCACTGTTGGTAAAAGGGAATTACTGAAGGAAGAAGAATCCGAGGGCTTGCTGAAACTTTC
GACAGACAAGACTTTGTTGGAAGTCCCAGAGTTCCGTCACTACGTTGAGCTTTATGCAAAGAGGTATTGTCTTCATTGTGATCCAAATATCCGAGTGAATTATTACTCTAGACCTGCAAA
CCGATCGAGTTTCATATAGACTGGCCAAGATTATGTTGTAAAGTGTCATCTTGGCTTCTTCTTTTGTTTAACCATTTTGTTTCTAATGTTTTGTACCAACAGGACGAAGATGCATTCTTC
AGAGACTATGCGGAGTCACACAAGAAACTTTCAGAGCTCGGGTTCACACCGACGTCTTCCATCGCTAAGGCAATAACAGATAGCACCGTGCTCGCACATAGTGCAGTCGGAGTCGCGGTC
GCTGCTGCTGTTGTGGCCTTTGGCTACTTCTATGAAATTCGCAGGAAGATGAAGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCACTCGTAGTTGACGCGGAGTACCTTAAGGAGGTCGAAAAGGCTCGCCGTGAGCTTCGTTCGCTCATCGCTAAGAAGAATTGCGCTCCGATCATGCTCCGATTGGCGTGGCAT
GATGCTGGAACCTACGACGCCAAATCGAAGACCGGTGGACCTAATGGATCGATTAGGAACGAAACGGAGTACAGTCATGGTGCTAATAGTGGTTTGAAAATCGCTCTCGATCTCTGTGAG
GACGTGAAATCTAAACTTCCCAAGATCAGTTATGCGGACCTATACCAGCTTGCTGGCGTGGTAGCGGTTGAAGTTACTGGTGGACCTGACATCAGTTTTGTTCCTGGAAGAAAAGATTGT
AATGACTGCACCGACGAAGGAAGACTTCCTGATGCTAATCAAGGTTTCAAACATCTTAAAGATGTTTTCTACCGAATGGGACTGTCTGATAAAGATATTGTGGCACTCTCAGGGGCTCAT
ACTCTGGGAAGGGCTCATCCAGAGAGATCAGGTTTCGATGGACCATGGACTCAAGATCCTCTCAAGTTTGATAACTCATACTTTGTGGAATTACTGAAGGAAGAAGAATCCGAGGGCTTG
CTGAAACTTTCGACAGACAAGACTTTGTTGGAAGTCCCAGAGTTCCGTCACTACGTTGAGCTTTATGCAAAGGACGAAGATGCATTCTTCAGAGACTATGCGGAGTCACACAAGAAACTT
TCAGAGCTCGGGTTCACACCGACGTCTTCCATCGCTAAGGCAATAACAGATAGCACCGTGCTCGCACATAGTGCAGTCGGAGTCGCGGTCGCTGCTGCTGTTGTGGCCTTTGGCTACTTC
TATGAAATTCGCAGGAAGATGAAGTAA

Retrieve as FASTA