Entry information : TsPrx[P]44 (Thhalv10026803m)
| Entry ID | 9812 |
|---|---|
| Creation | 2011-11-18 (Qiang Li) |
| Last sequence changes | 2011-11-29 (Qiang Li) |
| Sequence status | theoretical translation / pseudogene |
| Reviewer | Christophe Dunand |
| Last annotation changes | 2016-01-04 (Christophe Dunand) |
Peroxidase information: TsPrx[P]44 (Thhalv10026803m)
| Name (synonym) | TsPrx[P]44 (Thhalv10026803m) | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Class III peroxidase [Orthogroup: Prx025]* | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema | ||||||||||||||||||||||||||||||||||||
| Organism | Thellungiella salsuginea (Eutrema salsugineum) [TaxId: 72664 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
||||||||||||||||||||||||||||||||||||
| Tissue type | N/D |
||||||||||||||||||||||||||||||||||||
| Inducer | N/D |
||||||||||||||||||||||||||||||||||||
| Repressor | N/D |
||||||||||||||||||||||||||||||||||||
| Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||
| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9812' 'complement(join(5972202..5972499,5972607..5973043,5973148..5973348))' |
Exons►
|
||||||||||||||||||||||||||||||||||||
Literature and cross-references TsPrx[P]44 (Thhalv10026803m)
| DNA ref. | Phytozome 12: scaffold_1 (5973348..5972202) |
|---|
Protein sequence: TsPrx[P]44 (Thhalv10026803m)
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Pseudogene from genomic. Stop in frame (Maybe due to bad sequencing). Incorrect prediction from phytozome (a part of exon 2 was missing which has been completed). No EST. | ||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
| CDS► Send to BLAST |
|
||||||||||||
