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Entry information : SiPrx[P]181
Entry ID 9985
Creation 2011-12-14 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-12-14 (Qiang Li)
Peroxidase information: SiPrx[P]181
Name SiPrx[P]181
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Setaria
Organism Setaria italica    [TaxId: 4555 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SiPrx[P]181
start..stop		 S start..stop
SiPrx[P]103 159 9.39e-50 1..114 140..275
SiPrx[P]179 138 1.77e-43 1..114 1..136
SiPrx68 98 5.48e-26 1..62 131..214
SbPrx103 97 1.95e-25 1..62 130..213
Literature and cross-references SiPrx[P]181
DNA ref. Phytozome 12:   scaffold_2 (34124125..34124607)
Protein sequence: SiPrx[P]181
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   114
PWM (Da):   %s   11923.11 Transmb domain:   %s   i12-34o
PI (pH):   %s   7.58
Sequence
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ANSLRGFEVI DAIKAELERE CPPSWEVEAV RKDGRTVILQ GANVNLPAST SGVATFVQKF QERQPLCQGH GRPLRHTHHR QGTDGAVAVx GAAVLGAEDG NRVAGLVAAY AFDA 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Gap in frame; 5' and 3' end are missing). No prediction from phytozome.
DNA ►
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GCCAACTCGC TCAGGGGCTT TGAGGTCATC GACGCCATCA AAGCTGAGCT GGAGCGAGAG TGCCCGGGAC AGTCTCCTAC GCTGACCTCC TCGCCATCGC TGCCCGTAAC TCCGTCGTGG  TGGTAATAAT CACATATATA CATGCATGCA ATTATCATCC ACAAGCATTT AGATGATCAC TGATCGCCGA GCTGGGAGGT AGAGGCCGTC CGGAAGGACG GACGCACGGT GATCCTTCAG  GGCGCCAACG TCAACCTCCC GGCGTCAACA TCCGGCGTCG CTACCTTCGT GCAAAAGTTT CAGGAACGTC AGCCTCTCTG CCAAGGACAT GGTCGACCTC TCAGGCACAC ACACCATCGG  CAAGGTACGG ATGGTGCGCA GCTGTCCGAC CAGGCGCTAG CGTCGCCGTG AnnGGCGCAG CCGTGCTCGG GGCAGAGGAC GGCAATAGAG TCGCCGGCCT TGTGGCCGCC TACGCGTTTG 
ACGCC 

Retrieve as FASTA  
CDS►
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GCCAACTCGC TCAGGGGCTT TGAGGTCATC GACGCCATCA AAGCTGAGCT GGAGCGAGAG TGCCCGCCGA GCTGGGAGGT AGAGGCCGTC CGGAAGGACG GACGCACGGT GATCCTTCAG  GGCGCCAACG TCAACCTCCC GGCGTCAACA TCCGGCGTCG CTACCTTCGT GCAAAAGTTT CAGGAACGTC AGCCTCTCTG CCAAGGACAT GGTCGACCTC TCAGGCACAC ACACCATCGG 
CAAGGTACGG ATGGTGCCGT CGCCGTGAnn GGCGCAGCCG TGCTCGGGGC AGAGGACGGC AATAGAGTCG CCGGCCTTGT GGCCGCCTAC GCGTTTGACG CC 

Retrieve as FASTA