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Entry information : EgrRboh01 ( Eucgr.C00773 / Egrandis_v1_0.002005m)
Entry ID 10178
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2012-01-25 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-16 (Christophe Dunand)
Peroxidase information: EgrRboh01 ( Eucgr.C00773 / Egrandis_v1_0.002005m)
Name (synonym) EgrRboh01 ( Eucgr.C00773 / Egrandis_v1_0.002005m)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh002]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrRboh01
start..stop		 S start..stop
EguRboh01 1892 0 1..925 1..925
EglRboh01 1717 0 1..925 1..856
EcamRboh01 1640 0 137..925 1..789
VvRboh07 1470 0 3..925 10..917
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10178' 'join(12891463..12892066,12892197..12892353,12893091..12893139,12893356..12893469,12893598..12894020,12894409..12894792,12894893..12894988,12895177..12895292,12895377..12895547,12895635..12895791,12895875..12896063,12896171..12896299,12896491..12896569,12897053..12897162)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 12891463..12892066 602 N° 2 12892197..12892353 155 N° 3 12893091..12893139 47 N° 4 12893356..12893469 112
N° 5 12893598..12894020 421 N° 6 12894409..12894792 382 N° 7 12894893..12894988 94 N° 8 12895177..12895292 114
N° 9 12895377..12895547 169 N° 10 12895635..12895791 155 N° 11 12895875..12896063 187 N° 12 12896171..12896299 127
N° 13 12896491..12896569 77 N° 14 12897053..12897162 108  
join(12891463..12892066,12892197..12892353,12893091..12893139,12893356..12893469 ,12893598..12894020,12894409..12894792,12894893..12894988,12895177..12895292,128 95377..12895547,12895635..12895791,12895875..12896063,12896171..12896299,1289649 1..12896569,12897053..12897162)


exon

Literature and cross-references EgrRboh01 ( Eucgr.C00773 / Egrandis_v1_0.002005m)
DNA ref. Phytozome 12:   scaffold_3 (12891463..12897162)
Protein sequence: EgrRboh01 ( Eucgr.C00773 / Egrandis_v1_0.002005m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   925
PWM (Da):   %s   104532.21 Transmb domain:   %s   o364-386i445-464o500-522i545-567o577-591i727-744o
PI (pH):   %s   8.5
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSKRSSYSRGFDLPEEFDDEEDEAAAAADYGSVGGAMLPVFLNDLRQNSQQDLVEVTLELEDDSIVVRSVTPTSNNNLAFSAAADENPDPAAAAAALDRNLSVTTRIRRKFPWLRSGSS
RAGSEAEAPTAAAAAREARRARAQLDRSRSSAQRALKGLRFISKANFCARDAEELWRQVEARFHRLARDGLLAREDFGECIGMDSKEFAVGMFDALARRRRQRIGKITREELHDFWLQIS
DQSFDARLQIFFDMADSNEDGRITRAEVQLLMLSASANKLSKLKERAEEYASLIMEELDPENLGYIELWQLETLLLQKDTYMNYSRTLSTTSLGWSQNLSSFRPTDKVRRICSSLRCLVL
ENWQRGWILLLWAIVMGCLFAWKFIQYRNMAAFHVMGYCLATAKGAAETLKLNMALILLPVCRNTLTWLRSTRARSFIPFDDNINFHKIIACAIVIGIILHAGDHLACDFPRLVNSSPEK
FALISSDFNNRKPTYTDLLSGVEGVTGIAMVVLMAISFTLATHRFRRNIVRLPAPFNRLTGFNAFWYSHHLLGVVYVLLLIHGTFLYLVHEWYMKTTWMYISIPLLLYILERSMRACRSN
HYAVRILKVSVLPGNVFSIIMSKPQGFKYRSGQYIFLQCPTISPFEWHPFSITSAPGDDYLSVHIRTVGDWTQELKKTLTEGRDSSCVIGRAKFTSVGCINQTGQPKLLVDGPYGAPAQD
YRNYDVLLLVGLGIGATPFVSILRDLLSNTRAEEQDSITETSRSDDSTNSFASSNVTPGSKRKSQRTSSAHFYWVTRESGSFEWFKGVMNEVAEMDHKGQIELHNHLTSVYEEGDARSTL
ITMVQALNHAKHGFDILSGTRVRTHFGRPNWREVFIKVASKHPYTTVGVFYCGMPMLAKELRKLSHELSHKTSTRFEFHKELF

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_3, 13 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGTCGAAGCGGTCCAGCTACAGCCGCGGGTTCGACTTGCCCGAGGAGTTTGACGACGAGGAGGACGAGGCGGCCGCTGCCGCCGACTACGGCAGCGTCGGCGGGGCAATGCTGCCC
GTGTTCCTCAACGACCTGCGGCAGAACTCGCAGCAGGACCTCGTGGAGGTCACCCTCGAGCTCGAGGACGACTCCATCGTCGTCCGCAGCGTCACTCCGACGAGCAACAACAACCTGGCG
TTCTCCGCGGCCGCCGACGAAAACCCCGATCCCGCGGCGGCGGCGGCGGCGCTGGACAGGAACCTGTCGGTCACGACGAGGATCCGGAGGAAGTTCCCGTGGCTGCGGTCCGGGTCGTCG
CGGGCCGGCTCGGAGGCGGAGGCCCCGACGGCGGCGGCGGCCGCGAGGGAGGCGCGGAGGGCGAGGGCGCAGCTGGACCGGAGCCGGTCGAGCGCGCAGAGGGCGCTGAAGGGTCTCCGG
TTCATCAGCAAGGCCAACTTCTGCGCCAGGGACGCCGAGGAGCTCTGGCGCCAGGTCGAGGCCCGCTTCCACCGCCTCGCCAGGGACGGCCTGCTCGCCCGCGAGGACTTCGGCGAATGC
ATCGCGGTACGTTCTCCAAATCCCATCGCCATCGTTACAGTAGTGCATGCGAGACGTGGTGAAATGTGTGCGGACGGGTTGCGAAGGAAGTTGACGGTTGGCGGCGGTGGGTTTTGCTTT
GCTGTTGGAAAACCAGGGATGGACTCGAAGGAGTTCGCGGTGGGGATGTTCGACGCGCTGGCGCGGCGGCGGCGGCAGAGGATCGGGAAGATCACCAGGGAGGAGCTGCACGACTTCTGG
CTCCAAATCTCCGACCAGAGCTTCGACGCGCGGCTTCAAATATTCTTCGACATATGTGGGCCCCCCTCTCCCTGTCTCTCTTTATCTCTCGATTCGTCTAGCCGTTTCGTGACCGTTCGA
TCGGATCGGAGCGATGGCTTCCTGGCCTCGTTGACCGTGCCTTTTCGATCGATCTGACGGCGGGGGATGCGGAATCCGAGGCAGGCCCGGCCGCCCCCTGGCCGCATGATCTCGCCCGAG
GTTTCCGGCGGTCATCTCTCGGGATGATCGCCGGCGTATTAATTGCCTGACAGAAAGAAAAGACGAGAAGTGTCGTTGAAGCTTTAATTTACTTGTCGGACTCCATTGATTATTATTACC
CGCGAAAAGTGAAGTACATTGAATGTTACTTTTTGAAGAGCAAAAAGGATTTTGTCCAAATGGATTTTTGGTAGTGAATTTCGTGATTTTGAATGTACCCTTTCTTTGTCTTTTTACGTG
TAATCAACTCGTTGAAAATTAGAATTTATACACTAAGAATAGCAGTTGTTATTAAGATCATGCTAGAGTTATTATTGTCTTGGTCGGGGCCCAAGTCGTCGATAATTGTTGGGAATTTCT
GCTTTCTTGGGTCATGAAAAAATTTAATGCTTTCATTAAAAATGGAGAGGAAAATCTTAGTTATTTTTTTGCGTATTTGAACTAGATTTAGTGTACCTCCTCAATTTACTTGGTAATTCA
TGTGACTTGACAAATGCCCTAAAAGCCCTGATGAAAAGTCCTGACGTGTGTGTATCCTTTGTGCTTTATTAGGGCGGACAGCAATGAAGATGGGAGAATCACCAGGGCAGAAGTACAGGA
GAGGTAGGACTTTGTTCTTCCTCATCTGCAATTTCGAGTTTTGTCATCACATTACTCGAGCGTTATCAGCAGCGTGTCGTCCTTCTTTTAAGCTTGTCCATGTAGACATGAATGGTACTT
CCGGCTCACTAGCGAGATGATGCATCGGTTGTAGCTAAGAAAGAATGAACTGTTTCGTTTTACCGACACTTTGGAGCTTCACCAATGTCTTGATTTCAGCTTCTGATGCTCAGTGCATCA
GCTAACAAGTTGTCGAAGCTGAAAGAGCGAGCGGAGGAATACGCCTCCCTGATCATGGAGGAACTGGACCCGGAGAACCTCGGCTACATCGAGAGGTAAAAGCCCCTGAAGCGGCAAAGC
AAAACATAGATGACATAGGATATTCAACTTAGGAAAACTCTTTGCTCCATGGAAAGAAGTACTAATTCAGACAGCCTATCATTTGCCCTGTCCTCTGTTTCAGTTGTGGCAACTGGAGAC
TCTGCTTCTGCAAAAGGACACTTATATGAACTACAGCCGAACGCTCAGCACGACCAGTCTTGGCTGGAGCCAAAACCTGAGCTCGTTTAGACCGACCGACAAGGTGCGGAGGATTTGCAG
CTCCCTCCGATGCCTCGTGCTGGAGAACTGGCAAAGAGGTTGGATTCTGTTGCTTTGGGCGATAGTGATGGGGTGCCTCTTCGCTTGGAAGTTCATCCAGTACAGGAACATGGCAGCATT
TCACGTAATGGGCTATTGCCTGGCGACGGCCAAGGGGGCAGCAGAAACTCTGAAGCTCAACATGGCTCTCATCCTCCTGCCCGTCTGCCGGAATACCCTGACGTGGCTCCGGTCCACCCG
GGCCAGGTCGTTCATTCCCTTCGATGACAACATAAACTTCCACAAGAGGTAAAAGATCTGGCGAAACAAGTAGAAACATCATGCATAGAGTTTTGAAATGTTGGTTCTCAACATCGTATC
AATTACTCCTGGCTGAATTAAATTGGCATGGTTCGAAAACATAGTTTTTCCCAAGAATGGTGAAATTCACTATGGCAGGCAATAGAAATAGAAGATTTAGAAAGAAAGTCTAAAGATTTC
AATGGTTGCAACTTCCAGGGAATGCAATTCCATTAACATGCATGAGCTAAAGTGCATATGAACATGGCCGAGATATAAAGGAAGTACAGTTGTTCAAAGTGATTATTTCAAGCACTACTG
TATTTTAGACCAACTATATCTCGTGTATGCAAGAGATAATGGAATGACACTCCAGCACTTTTTTCCCAATGCACAGATAATTGCATGTGCCATAGTCATCGGGATCATCCTTCACGCAGG
AGACCATCTAGCATGTGATTTTCCCCGCCTGGTAAACTCCTCCCCAGAAAAGTTTGCCCTCATATCCTCTGACTTCAATAACAGAAAGCCCACATACACGGACCTTCTATCTGGAGTTGA
AGGAGTGACGGGCATTGCTATGGTGGTTTTGATGGCTATCTCATTCACTCTAGCGACACACCGGTTCAGGAGAAACATAGTAAGGCTACCTGCACCTTTCAACAGATTGACAGGTTTCAA
TGCATTCTGGTATTCCCATCACCTGCTAGGTGTGGTCTACGTTTTACTGCTCATCCATGGAACCTTTCTGTACTTGGTGCACGAATGGTACATGAAAACGCGGTAAGCAATCCGTCTCAT
TGTATATGCCGTAGTTAAGTCAAGACATCAAACTTCATCATGTATTCAATAGCACCGGTACTAATTCAATGCCTTACCTCAGACATGGATGTACATCTCTATTCCATTGTTGCTTTACAT
ACTTGAGAGAAGCATGCGAGCATGCAGATCAAACCATTATGCAGTTCGAATATTGAAGAGGTAATACCTTTCTTATTTCTCTTACATTTCGACTTTTCATTGTTTGATCAAGAAAAAGGA
CATAATATAATGCACAATTGAGAAAAAAATGCATCAGCGTCTTCATGCACGATCTTCGCAAAGTACATTGAGAAATTTGTTTTTCTGAAAAAAGCTAATTTCTTTTGGACTATGCTTGTT
CTCTTCAGGTTTCGGTTCTACCAGGGAATGTCTTCAGCATAATCATGTCCAAGCCTCAAGGGTTCAAGTACAGAAGCGGGCAGTACATTTTTCTACAATGTCCGACAATTTCCCCTTTTG
AGTGTGGTAAAGTCCAAAACTCATCTCACCTCCTAGCTTTTCCAACATCTGCATTTCCACCATCAAAGGCTAAGTGCTGATACCTTCCAGGCACCCATTCTCAATTACTTCAGCACCTGG
AGATGACTACCTCAGTGTTCACATCAGGACAGTTGGTGATTGGACACAGGAGTTGAAAAAAACTCTCACTGAAGGCAGAGACTCGTCATGTGTCATTGGCCGAGCAAAATTCACATCGGT
TGGTTGTATCAATCAGACAGGGGGTAATTATGTTTCTGGCAGGCTTAAGTTCCGAAATAGAAACTATTCTAGGTAATGCTAACTGAACAAACTGTCATGTCATGATGCAGCCAACCCAAA
TTGCTCGTCGATGGTCCATATGGAGCTCCAGCTCAGGACTACAGAAATTATGATGTACTGCTCCTCGTGGGGCTTGGCATTGGTGCAACCCCTTTTGTAAGCATCCTTAGAGATCTTCTG
AGTAATACAAGAGCAGAGGAGCAAATGTGGTACAGTATGTTGCTAATATATGAACAACGTGTCTTAAAATTTAGGAAACACATCCTAAACTTTTGCTATTGTGATGAACTAGGATTCAAT
CACAGAGACCAGTAGATCTGATGATAGCACAAATAGTTTCGCATCTTCAAACGTGACACCAGGCAGCAAAAGAAAGTCACAGAGGACGTCCAGTGCTCATTTCTACTGGGTGACTAGGGA
ATCTGGGTCGTTCGAGTGGTTCAAAGGAGTCATGAATGAAGTTGCAGAAATGGATCACAAAAAGTAAAATTCTTCTGAACATTGCTCATGACTGTTTAGTGCACGTGTAGAAGGAACTAA
ACGAGTGGGCTAAGAGACCCTATGTCTTCTCTCTCTTTCTGTATGAGCAGGGTCAAATTGAGCTTCACAATCACCTTACCAGTGTCTATGAAGAGGGAGATGCAAGGTCAACTCTAATCA
CCATGGTCCAGGCTCTCAATCATGCCAAACACGGTTTCGACATCCTATCAGGCACACGGGGGTATAATATGATGTCTACATAACAATGCCACATTCCGTTACGTTACCATGTTAACAATG
AACACGCTACCGAGACAATTGACTAGAGACACTATAGATAGAATATTCTTCTCTATTTTTTAGCTCGTTTGTTAAAGTGAACTGCTTCAACCGTGAGGCTGCTAACTCAGTCCTGATATT
CGATACTTGCAGGTAAGAACACACTTTGGAAGACCGAATTGGAGAGAGGTATTTATCAAAGTAGCTTCAAAGCATCCATACACTACAGTAGAGGTAAGTGTAAAACAAGAAAGCATTAGT
ACTTGCTGACAAATTTCATAACAATCAAACTAAGTAGTTCAGATCCCAGATACAATGAAATTACAAAAACTAGCTTCATTTGTTGCTGGTAATTAATCCTGAAATCATCATACAGGTAGA
GCTCAGCACAATAGCCTTCTGATATTAACAATAACTAGACAAGACTTACAAATTGACATTAGGTCAGATGTAACTTCTGCAAATAAGAGACTTGTTTTTAAACTTGTAGGAGACCCTTAA
ACGCACTCTGTGGCCAAGTCTACATCAGAAAATAATGCGAAGGATCAAAATATAAGATCTTAACTTTTGCGTAAATTATATAATAAAACCCTTGACTAGGAAAGTAAAACCATCTCCTTA
ACGTAATGAAACTCTACAATGTTTGCTGAATCTGCAACTGTCGCAAGATACTGACGTTCCAATGATGTCTGAACGAAAGGGGTTTTTCTATTGCAGGGGTGTTCTACTGCGGGATGCCGA
TGTTAGCAAAGGAATTAAGGAAGCTATCGCATGAGCTGAGTCACAAGACATCTACACGTTTCGAATTCCACAAGGAGCTTTTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGTCGAAGCGGTCCAGCTACAGCCGCGGGTTCGACTTGCCCGAGGAGTTTGACGACGAGGAGGACGAGGCGGCCGCTGCCGCCGACTACGGCAGCGTCGGCGGGGCAATGCTGCCC
GTGTTCCTCAACGACCTGCGGCAGAACTCGCAGCAGGACCTCGTGGAGGTCACCCTCGAGCTCGAGGACGACTCCATCGTCGTCCGCAGCGTCACTCCGACGAGCAACAACAACCTGGCG
TTCTCCGCGGCCGCCGACGAAAACCCCGATCCCGCGGCGGCGGCGGCGGCGCTGGACAGGAACCTGTCGGTCACGACGAGGATCCGGAGGAAGTTCCCGTGGCTGCGGTCCGGGTCGTCG
CGGGCCGGCTCGGAGGCGGAGGCCCCGACGGCGGCGGCGGCCGCGAGGGAGGCGCGGAGGGCGAGGGCGCAGCTGGACCGGAGCCGGTCGAGCGCGCAGAGGGCGCTGAAGGGTCTCCGG
TTCATCAGCAAGGCCAACTTCTGCGCCAGGGACGCCGAGGAGCTCTGGCGCCAGGTCGAGGCCCGCTTCCACCGCCTCGCCAGGGACGGCCTGCTCGCCCGCGAGGACTTCGGCGAATGC
ATCGGGATGGACTCGAAGGAGTTCGCGGTGGGGATGTTCGACGCGCTGGCGCGGCGGCGGCGGCAGAGGATCGGGAAGATCACCAGGGAGGAGCTGCACGACTTCTGGCTCCAAATCTCC
GACCAGAGCTTCGACGCGCGGCTTCAAATATTCTTCGACATGGCGGACAGCAATGAAGATGGGAGAATCACCAGGGCAGAAGTACAGGAGCTTCTGATGCTCAGTGCATCAGCTAACAAG
TTGTCGAAGCTGAAAGAGCGAGCGGAGGAATACGCCTCCCTGATCATGGAGGAACTGGACCCGGAGAACCTCGGCTACATCGAGTTGTGGCAACTGGAGACTCTGCTTCTGCAAAAGGAC
ACTTATATGAACTACAGCCGAACGCTCAGCACGACCAGTCTTGGCTGGAGCCAAAACCTGAGCTCGTTTAGACCGACCGACAAGGTGCGGAGGATTTGCAGCTCCCTCCGATGCCTCGTG
CTGGAGAACTGGCAAAGAGGTTGGATTCTGTTGCTTTGGGCGATAGTGATGGGGTGCCTCTTCGCTTGGAAGTTCATCCAGTACAGGAACATGGCAGCATTTCACGTAATGGGCTATTGC
CTGGCGACGGCCAAGGGGGCAGCAGAAACTCTGAAGCTCAACATGGCTCTCATCCTCCTGCCCGTCTGCCGGAATACCCTGACGTGGCTCCGGTCCACCCGGGCCAGGTCGTTCATTCCC
TTCGATGACAACATAAACTTCCACAAGATAATTGCATGTGCCATAGTCATCGGGATCATCCTTCACGCAGGAGACCATCTAGCATGTGATTTTCCCCGCCTGGTAAACTCCTCCCCAGAA
AAGTTTGCCCTCATATCCTCTGACTTCAATAACAGAAAGCCCACATACACGGACCTTCTATCTGGAGTTGAAGGAGTGACGGGCATTGCTATGGTGGTTTTGATGGCTATCTCATTCACT
CTAGCGACACACCGGTTCAGGAGAAACATAGTAAGGCTACCTGCACCTTTCAACAGATTGACAGGTTTCAATGCATTCTGGTATTCCCATCACCTGCTAGGTGTGGTCTACGTTTTACTG
CTCATCCATGGAACCTTTCTGTACTTGGTGCACGAATGGTACATGAAAACGACATGGATGTACATCTCTATTCCATTGTTGCTTTACATACTTGAGAGAAGCATGCGAGCATGCAGATCA
AACCATTATGCAGTTCGAATATTGAAGGTTTCGGTTCTACCAGGGAATGTCTTCAGCATAATCATGTCCAAGCCTCAAGGGTTCAAGTACAGAAGCGGGCAGTACATTTTTCTACAATGT
CCGACAATTTCCCCTTTTGAGTGGCACCCATTCTCAATTACTTCAGCACCTGGAGATGACTACCTCAGTGTTCACATCAGGACAGTTGGTGATTGGACACAGGAGTTGAAAAAAACTCTC
ACTGAAGGCAGAGACTCGTCATGTGTCATTGGCCGAGCAAAATTCACATCGGTTGGTTGTATCAATCAGACAGGCCAACCCAAATTGCTCGTCGATGGTCCATATGGAGCTCCAGCTCAG
GACTACAGAAATTATGATGTACTGCTCCTCGTGGGGCTTGGCATTGGTGCAACCCCTTTTGTAAGCATCCTTAGAGATCTTCTGAGTAATACAAGAGCAGAGGAGCAAATGGATTCAATC
ACAGAGACCAGTAGATCTGATGATAGCACAAATAGTTTCGCATCTTCAAACGTGACACCAGGCAGCAAAAGAAAGTCACAGAGGACGTCCAGTGCTCATTTCTACTGGGTGACTAGGGAA
TCTGGGTCGTTCGAGTGGTTCAAAGGAGTCATGAATGAAGTTGCAGAAATGGATCACAAAGGTCAAATTGAGCTTCACAATCACCTTACCAGTGTCTATGAAGAGGGAGATGCAAGGTCA
ACTCTAATCACCATGGTCCAGGCTCTCAATCATGCCAAACACGGTTTCGACATCCTATCAGGCACACGGGTAAGAACACACTTTGGAAGACCGAATTGGAGAGAGGTATTTATCAAAGTA
GCTTCAAAGCATCCATACACTACAGTAGGGGTGTTCTACTGCGGGATGCCGATGTTAGCAAAGGAATTAAGGAAGCTATCGCATGAGCTGAGTCACAAGACATCTACACGTTTCGAATTC
CACAAGGAGCTTTTCTGA

Retrieve as FASTA