View Redoxidase 11032

Entry information : EglRboh01

Entry ID	11032
Creation	2012-05-18 (Qiang Li)
Last sequence changes	2013-03-13 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-02-16 (Christophe Dunand)

Peroxidase information: EglRboh01

Name

EglRboh01

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus globulus [TaxId: 34317 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EglRboh01 start..stop	S start..stop
EgrRboh01	1717	0	1..856	1..925
EguRboh01	1627	0	1..856	1..925
EcamRboh01	1622	0	68..856	1..789
VvRboh07	1367	0	3..856	10..917

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11032' 'join(1..63,181..207,298..604,735..891,1629..1677,1894..2007,2136..2558,2947..3330,3431..3526,3715..3830,3915..4085,4173..4329,4413..4601,4709..4837,5029..5107,5591..5700)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..63	61	N° 2	181..207	25	N° 3	298..604	305	N° 4	735..891	155
N° 5	1629..1677	47	N° 6	1894..2007	112	N° 7	2136..2558	421	N° 8	2947..3330	382
N° 9	3431..3526	94	N° 10	3715..3830	114	N° 11	3915..4085	169	N° 12	4173..4329	155
N° 13	4413..4601	187	N° 14	4709..4837	127	N° 15	5029..5107	77	N° 16	5591..5700	108
join(1..63,181..207,298..604,735..891,1629..1677,1894..2007,2136..2558,2947..333 0,3431..3526,3715..3830,3915..4085,4173..4329,4413..4601,4709..4837,5029..5107,5 591..5700)

Literature and cross-references EglRboh01

Protein sequence: EglRboh01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	856 (313)
PWM (Da):	96317.31 (33670.8)	Transmb domain:	o295-317i376-395o431-453i476-498o508-522i658-675o
PI (pH):	9.48 (8.35)	Peptide Signal:	cut: 37 range:37-349

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGSKRSSYSRGFDLPEEFDDELEDDSIVVRRNLSVTTRIRRKFPWLRSGSSRAGSxxxxxxxAAAAREARRARAQLDRSRSSAQRALKGLRFISKANFCARDAEELWRQVEARFHRLARD
GLLAREDFGECIGMDSKEFAVGMFDAxxxxRRQRIGKITREELHDFWLQISDQSFDARLQIFFDMADSNEDGRITRAEVQELLMLSASANKLSKLKERAEEYASLIMEELDPENLGYIEL
WQLETLLLQKDTYMNYSRTLSTTSLGWSQNLSSFRPTDKVRRICSSLRCLVLENWQRGWILLLWAIVMGCLFAWKFIQYRNMAAFHVMGYCLATAKGAAETLKLNMALILLPVCRNTLTW
LRSTRARSFIPFDDNINFHKIIACAIVIGIILHAGDHLACDFPRLVNSSPEKFALISSDFNNRKPTYTDLLSGVEGVTGIAMVVLMAISFTLATHRFRRNIVRLPAPFNRLTGFNAFWYS
HHLLGVVYVLLLIHGTFLYLVHEWYMKTTWMYISIPLLLYILERSMRACRSNHYAVRILKVSVLPGNVFSIIMSKPQGFKYRSGQYIFLQCPTISPFEWHPFSITSAPGDDYLSVHIRTV
GDWTQELKKTLTEGRDSSCVIGRAKFTxVGCINQTGQPKLLVHGPYGAPAQDYRNYDVLLLVGLGIGATPFVSILRDLLSNTRAEEQMDSITETSRSDDSTNSFASSNVTPGSKRKSQRT
SSAHFYWVTRESGSFEWFKGVMNEVAEMDHKGQIELHNHLTSVYEEGDARSTLITMVQALNHAKHGFDILSGTRVRTHFGRPNWREVFIKVASKHPYTTVGVFYCGMPMLAKELRKLSHE
LSHKTSTRFEFHKELF

Retrieve as FASTA

Remarks

Complete sequence from NGS. Short PS is missing due to NNNN.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGTCGAAGCGGTCCAGCTACAGCCGCGGGTTCGACTTGCCCGAGGAGTTTGACGACGAGAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGCGGGGCAATGCTGC
CCGTGTTCCTCAACGACCTGCGGCAGAACTCGCAGCAGGACCTCGTGGAGGTCACCCTCGAGCTCGAGGACGACTCCATCGTCGTCCGCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGGAACCTGTCGGTCACGACGAGGATCCGGAGGAAGTTCCCGTGGCTGCGGTCCGGGTC
GTCGCGGGCCGGCTCNNNNNNNNNNNNNNNNNNNNNNGCGGCGGCCGCGAGGGAGGCGCGGAGGGCGAGGGCGCAGCTGGACCGGAGCCGGTCGAGCGCGCAGAGGGCGCTGAAGGGTCT
CCGGTTCATCAGCAAGGCCAACTTCTGCGCCAGGGACGCCGAGGAGCTCTGGCGCCAGGTCGAGGCCCGCTTCCACCGCCTCGCCAGGGACGGCCTGCTCGCCCGCGAGGACTTCGGCGA
ATGCATCGCGGTACGTTCTCCAAATCCCATCGCCATCGTTACAGTAGTGCATGCGAGACGTGGTGAAATGTGTGCGGACGGGTTGCGAAGGAAGTTGACGGTTGGCGGCGGTGGGTTTTG
CTTTGCTGTTGGAAAACCAGGGATGGACTCGAAGGAGTTCGCGGTGGGGATGTTCGACGCGNNNNNNNNNNNGCGGCGGCAGAGGATCGGGAAGATCACCAGGGAGGAGCTGCACGACTT
CTGGCTCCAAATCTCCGACCAGAGCTTCGACGCGCGGCTTCAAATATTCTTCGACATATGTGGGCCCCCCTCTCCCTGTCTCTCTTTATCTCTCGATTCGTCTAGCCGTTTCGTGACCGT
TCGATCGGATCGGAGCGATGGCTTCCTGGCCTCGTTGACCGTGCCTTTTCGATCGATCTGACGGCGGGGGATGCGGAATCCGAGGCAGGCCCGGCCGCCCCCTGGCCGCATGATCTCGCN
NNNNNNNNNNNNNNNNNNNCTCTCGGGATGATCGCCGGCGTATTAATTGCCTGACAGAAAGAAAAGACGAGAAGTGTCGTTGAAGCTTTAATTTACTTGTCGGACTCCATTGATTATTAT
TACCCGCGAAAAGTGAAGTACATTGAATGTTACTTTTTGAAGAGCAAAAAGGATTTTGTCCAAATGGATTTTTGGTAGTGAATTTCGTGATTTTGAATGTACCCTTTCTTTGTCTTTTTA
CGTGTAATCAACTCGTTGAAAATTAGAATTTATACACTAAGAATAGCAGTTGTTATTAAGATCATGCTAGAGTTATTATTGTCTTGGTCGGGGCCCAAGTCGTCGATAATTGTTGGGAAT
TTCTGCTTTCTTGGGTCATGAAAAAATTTAATGCTTTCATTAAAAATGGAGAGGAAAATCTTAGTTATTTTTTTGCGTATTTGAACTAGATTTAGTGTACCTCCTCAATTTACTTGGTAA
TTCATGTGACTTGACAAATGCCCTAAAAGCCCTGATGAAAAGTCCTGACGTGTGTGTATCCTTTGTGCTTTATTAGGGCGGACAGCAATGAAGATGGGAGAATCACCAGGGCAGAAGTAC
AGGAGAGGTAGGACTTTGTTCTTCCTCATCTGCAATTTCGAGTTTTGTCATCACATTACTCGAGCGTTATCAGCAGCGTGTCGTCCTTCTTTTAAGCTTGTCCATGTAGACATGAATGGT
ACTTCCGGCTCACTAGCGAGATGATGCATCGGTTGTAGCTAAGAAAGAATGAACTGTTTCGTTTTACCGACACTTTGGAGCTTCACCAATGTCTTGATTTCAGCTTCTGATGCTCAGTGC
ATCAGCTAACAAGTTGTCGAAGCTGAAAGAGCGAGCGGAGGAATACGCCTCCCTGATCATGGAGGAACTGGACCCGGAGAACCTCGGCTACATCGAGAGGTAAAAGCCCCTGAAGCGGCA
AAGCAAAACATAGATGACATAGGATATTCAACTTAGGAAAACTCTTTGCTCCATGGAAAGAAGTACTAATTCAGACAGCCTATCATTTGCCCTGTCCTCTGTTTCAGTTGTGGCAACTGG
AGACTCTGCTTCTGCAAAAGGACACTTATATGAACTACAGCCGAACGCTCAGCACGACCAGTCTTGGCTGGAGCCAAAACCTGAGCTCGTTTAGACCGACCGACAAGGTGCGGAGGATTT
GCAGCTCCCTCCGATGCCTCGTGCTGGAGAACTGGCAAAGAGGTTGGATTCTGTTGCTTTGGGCGATAGTGATGGGGTGCCTCTTCGCTTGGAAGTTCATCCAGTACAGGAACATGGCAG
CATTTCACGTAATGGGCTATTGCCTGGCGACGGCCAAGGGGGCAGCAGAAACTCTGAAGCTCAACATGGCTCTCATCCTCCTGCCCGTCTGCCGGAATACCCTGACGTGGCTCCGGTCCA
CCCGGGCCAGGTCGTTCATTCCCTTCGATGACAACATAAACTTCCACAAGAGGTAAAAGATCTGGCGAAACAAGTAGAAACATCATGCATAGAGTTTTGAAATGTTGGTTCTCAACATCG
TATCAATTACTCCTGGCTGAATTAAATTGGCATGGTTCGAAAACATAGTTTTTCCNNAGAATGGTGAAATTCACTATGGCAGGCAATAGAAATAGAAGATTTAGAAAGAAAGTCTAAAGA
TTTCAATGGTTGCAACTTCCAGGGAATGCAATTCCATTAACATGCATGAGCTAAAGTGCATATGAACATGGCCGAGATATAAAGGAAGTACAGTTGTTCAAAGTGATTATTTCAAGCACT
ACTGTATTTTAGACCAACTATATCTCGTGTATGCAAGAGATAATGGAATGACACTCCAGCACTTTTTTCCCAATGCACAGATAATTGCATGTGCCATAGTCATCGGGATCATCCTTCACG
CAGGAGACCATCTAGCATGTGATTTTCCCCGCCTGGTAAACTCCTCCCCAGAAAAGTTTGCCCTCATATCCTCTGACTTCAATAACAGAAAGCCCACATACACGGACCTTCTATCTGGAG
TTGAAGGAGTGACGGGCATTGCTATGGTGGTTTTGATGGCTATCTCATTCACTCTAGCGACACACCGGTTCAGGAGAAACATAGTAAGGCTACCTGCACCTTTCAACAGATTGACAGGTT
TCAATGCATTCTGGTATTCCCATCACCTGCTAGGTGTGGTCTACGTTTTACTGCTCATCCATGGAACCTTTCTGTACTTGGTGCACGAATGGTACATGAAAACGCGGTAAGCAATCCGTC
TCATTGTATATGCCGTAGTTAAGTCAAGACATCAAACTTCATCATGTATTCAATAGCACCGGTACTAATTCAATGCCTTACCTCAGACATGGATGTACATCTCTATTCCATTGTTGCTTT
ACATACTTGAGAGAAGCATGCGAGCATGCAGATCAAACCATTATGCAGTTCGAATATTGAAGAGGTAATACCTTTCTTATTTCTCTTACATTTCGACTTTTCATTGTTTGATCAAGAAAA
AGGACATAATATAATGCACAATTGAGAAAAAAATGCATCAGCGTCTTCATGCACGATCTTCGCAAAGTACATTGAGAAATTTGTTTTTCTGAAAAAAGCTAATTTCTTTTGGACTATGCT
TGTTCTCTTCAGGTTTCGGTTCTACCAGGGAATGTCTTCAGCATAATCATGTCCAAGCCTCAAGGGTTCAAGTACAGAAGCGGGCAGTACATTTTTCTACAATGTCCGACAATTTCCCCT
TTTGAGTGTGGTAAAGTCCAAAACTCATCTCACCTCCTAGCTTTTCCAACATCTGCATTTCCACCATCAAAGGCTAAGTGCTGATACCTTCCAGGCACCCATTCTCAATTACTTCAGCAC
CTGGAGATGACTACCTCAGTGTTCACATCAGGACAGTTGGTGATTGGACACAGGAGTTGAAAAAAACTCTCACTGAAGGCAGAGACTCGTCATGTGTCATTGGCCGAGCAAAATTCACNN
NGGTTGGTTGTATCAATCAGACAGGGGGTAATTATGTTTCTGGCAGGCTTAAGTTCCGAAATAGAAACTATTCTAGGTAATGCTAACTGAACAAACTGTCATGTCATGATGCAGCCAACC
CAAATTGCTCGTCCATGGTCCATATGGAGCTCCAGCTCAGGACTACAGAAATTATGATGTACTGCTCCTCGTGGGGCTTGGCATTGGTGCAACCCCTTTTGTAAGCATCCTTAGAGATCT
TCTGAGTAATACAAGAGCAGAGGAGCAAATGTGGTACAGTATGTTGCTAATATATGAACAACGTGTCTTAAAATTTAGGAAACACATCCTAAACTTTTGCTATTGTGATGAACTAGGATT
CAATCACAGAGACCAGTAGATCTGATGATAGCACAAATAGTTTCGCATCTTCAAACGTGACACCAGGCAGCAAAAGAAAGTCACAGAGGACGTCCAGTGCTCATTTCTACTGGGTGACTA
GGGAATCTGGGTCGTTCGAGTGGTTCAAAGGAGTCATGAATGAAGTTGCAGAAATGGATCACAAAAAGTAAAATTCTTCTGAACATTGCTCATGACTGTTTAGTGCACGTGTAGAAGGAA
CTAAACGAGTGGGCTAAGAGACCCTATGTCTTCTCTCTCTTTCTGTATGAGCAGGGTCAAATTGAGCTTCACAATCACCTTACCAGTGTCTATGAAGAGGGAGATGCAAGGTCAACTCTA
ATCACCATGGTCCAGGCTCTCAATCATGCCAAACACGGTTTCGACATCCTATCAGGCACACGGGGGTATAATATGATGTCTACATAACAATGCCACATTCCGTTACGTTACCATGTTAAC
AATGAACACGCTACCGAGACAATTGACTAGAGACACTATAGATAGAATATTCTTCTCTATTTTTTAGCTCGTTTGTTAAAGTGAACTGCTTCAACCGTGAGGCTGCTAACTCAGTCCTGA
TATTCGATACTTGCAGGTAAGAACACACTTTGGAAGACCGAATTGGAGAGAGGTATTTATCAAAGTAGCTTCAAAGCATCCATACACTACAGTAGAGGTAAGTGTAAAACAAGAAAGCAT
TAGTACTTGCTGACAAATTTCATAACAATCAAACTAAGTAGTTCAGATCCCAGATACAATGAAATTACAAAAACTAGCTTCATTTGTTGCTGGTAATTAATCCTGAAATCATCATACAGG
TAGAGCTCAGCACAATAGCCTTCTGATATTAACAATAACTAGACAAGACTTACAAATTGACATTAGGTCAGATGTAACTTCTGCAAATAAGAGACTTGTTTTTAAACTTGTAGGAGACCC
TTAAACGCACTCTGTGGCCAAGTCTACATCAGAAAATAATGCGAAGGATCAAAATATAAGATCTTAACTTTTGCGTAAATTATATAATAAAACCCTTGACTAGGAAAGTAAAACCATCTC
CTTAACGTAATGAAACTCTACAATGTTTGCTGAATCTGCAACTGTCGCAAGATACTGACGTTCCAATGATGTCTGAACGAAAGGGGTTTTTCTATTGCAGGGGTGTTCTACTGCGGGATG
CCGATGTTAGCAAAGGAATTAAGGAAGCTATCGCATGAGCTGAGTCACAAGACATCTACACGTTTCGAATTCCACAAGGAGCTTTTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGTCGAAGCGGTCCAGCTACAGCCGCGGGTTCGACTTGCCCGAGGAGTTTGACGACGAGCTCGAGGACGACTCCATCGTCGTCCGCAGGAACCTGTCGGTCACGACGAGGATCCGG
AGGAAGTTCCCGTGGCTGCGGTCCGGGTCGTCGCGGGCCGGCTCNNNNNNNNNNNNNNNNNNNNNNGCGGCGGCCGCGAGGGAGGCGCGGAGGGCGAGGGCGCAGCTGGACCGGAGCCGG
TCGAGCGCGCAGAGGGCGCTGAAGGGTCTCCGGTTCATCAGCAAGGCCAACTTCTGCGCCAGGGACGCCGAGGAGCTCTGGCGCCAGGTCGAGGCCCGCTTCCACCGCCTCGCCAGGGAC
GGCCTGCTCGCCCGCGAGGACTTCGGCGAATGCATCGGGATGGACTCGAAGGAGTTCGCGGTGGGGATGTTCGACGCGNNNNNNNNNNNGCGGCGGCAGAGGATCGGGAAGATCACCAGG
GAGGAGCTGCACGACTTCTGGCTCCAAATCTCCGACCAGAGCTTCGACGCGCGGCTTCAAATATTCTTCGACATGGCGGACAGCAATGAAGATGGGAGAATCACCAGGGCAGAAGTACAG
GAGCTTCTGATGCTCAGTGCATCAGCTAACAAGTTGTCGAAGCTGAAAGAGCGAGCGGAGGAATACGCCTCCCTGATCATGGAGGAACTGGACCCGGAGAACCTCGGCTACATCGAGTTG
TGGCAACTGGAGACTCTGCTTCTGCAAAAGGACACTTATATGAACTACAGCCGAACGCTCAGCACGACCAGTCTTGGCTGGAGCCAAAACCTGAGCTCGTTTAGACCGACCGACAAGGTG
CGGAGGATTTGCAGCTCCCTCCGATGCCTCGTGCTGGAGAACTGGCAAAGAGGTTGGATTCTGTTGCTTTGGGCGATAGTGATGGGGTGCCTCTTCGCTTGGAAGTTCATCCAGTACAGG
AACATGGCAGCATTTCACGTAATGGGCTATTGCCTGGCGACGGCCAAGGGGGCAGCAGAAACTCTGAAGCTCAACATGGCTCTCATCCTCCTGCCCGTCTGCCGGAATACCCTGACGTGG
CTCCGGTCCACCCGGGCCAGGTCGTTCATTCCCTTCGATGACAACATAAACTTCCACAAGATAATTGCATGTGCCATAGTCATCGGGATCATCCTTCACGCAGGAGACCATCTAGCATGT
GATTTTCCCCGCCTGGTAAACTCCTCCCCAGAAAAGTTTGCCCTCATATCCTCTGACTTCAATAACAGAAAGCCCACATACACGGACCTTCTATCTGGAGTTGAAGGAGTGACGGGCATT
GCTATGGTGGTTTTGATGGCTATCTCATTCACTCTAGCGACACACCGGTTCAGGAGAAACATAGTAAGGCTACCTGCACCTTTCAACAGATTGACAGGTTTCAATGCATTCTGGTATTCC
CATCACCTGCTAGGTGTGGTCTACGTTTTACTGCTCATCCATGGAACCTTTCTGTACTTGGTGCACGAATGGTACATGAAAACGACATGGATGTACATCTCTATTCCATTGTTGCTTTAC
ATACTTGAGAGAAGCATGCGAGCATGCAGATCAAACCATTATGCAGTTCGAATATTGAAGGTTTCGGTTCTACCAGGGAATGTCTTCAGCATAATCATGTCCAAGCCTCAAGGGTTCAAG
TACAGAAGCGGGCAGTACATTTTTCTACAATGTCCGACAATTTCCCCTTTTGAGTGGCACCCATTCTCAATTACTTCAGCACCTGGAGATGACTACCTCAGTGTTCACATCAGGACAGTT
GGTGATTGGACACAGGAGTTGAAAAAAACTCTCACTGAAGGCAGAGACTCGTCATGTGTCATTGGCCGAGCAAAATTCACNNNGGTTGGTTGTATCAATCAGACAGGCCAACCCAAATTG
CTCGTCCATGGTCCATATGGAGCTCCAGCTCAGGACTACAGAAATTATGATGTACTGCTCCTCGTGGGGCTTGGCATTGGTGCAACCCCTTTTGTAAGCATCCTTAGAGATCTTCTGAGT
AATACAAGAGCAGAGGAGCAAATGGATTCAATCACAGAGACCAGTAGATCTGATGATAGCACAAATAGTTTCGCATCTTCAAACGTGACACCAGGCAGCAAAAGAAAGTCACAGAGGACG
TCCAGTGCTCATTTCTACTGGGTGACTAGGGAATCTGGGTCGTTCGAGTGGTTCAAAGGAGTCATGAATGAAGTTGCAGAAATGGATCACAAAGGTCAAATTGAGCTTCACAATCACCTT
ACCAGTGTCTATGAAGAGGGAGATGCAAGGTCAACTCTAATCACCATGGTCCAGGCTCTCAATCATGCCAAACACGGTTTCGACATCCTATCAGGCACACGGGTAAGAACACACTTTGGA
AGACCGAATTGGAGAGAGGTATTTATCAAAGTAGCTTCAAAGCATCCATACACTACAGTAGGGGTGTTCTACTGCGGGATGCCGATGTTAGCAAAGGAATTAAGGAAGCTATCGCATGAG
CTGAGTCACAAGACATCTACACGTTTCGAATTCCACAAGGAGCTTTTCTGA

Retrieve as FASTA