Entry information : EcamGPx03 ( EcC063374.10)
Entry ID 10616
Creation 2012-02-29 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-03-12 (Christophe Dunand)
Peroxidase information: EcamGPx03 ( EcC063374.10)
Name (synonym) EcamGPx03 ( EcC063374.10)
Class Plant glutathione peroxidase     [Orthogroup: Gpx2001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamGPx03
start..stop
S start..stop
EgrGPx03 273 4.57e-95 1..142 1..142
EguGPx03 233 3.18e-79 1..142 1..142
EglGPx03 218 8.75e-74 1..142 1..122
VvGPx01 149 3.39e-46 1..142 1..141
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10616' 'join(1..288,862..938,1019..1079)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..288 286 N° 2 862..938 75 N° 3 1019..1079 59  
join(1..288,862..938,1019..1079)


exon

Literature and cross-references EcamGPx03 ( EcC063374.10)
Protein sequence: EcamGPx03 ( EcC063374.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   142
PWM (Da):   %s   15091.67  
PI (pH):   %s   10.46
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASAPFSAAFSAPSYGFRRAGTNGNFPFPTSLWSPAALRVPSSVRSSLGSCNSAFLVNGLSSSSLPSSSRLSFSSRSSGVYARAATEKTLYDFSVKDIDRNDVSLSKFKGKVLLIVNVAS
K
CGLTTSNYKELSHVYEKYKT

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from kazusa (3' end is missing due to the ending of contig EcC063374.10. Complete the 3' end with very contig EcS762106.10; Ps is still missing). Close to PS: EcS676708.10 on very short contig (removed).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTCGGCCCCTTTCTCGGCCGCTTTCTCCGCCCCTTCGTACGGCTTCCGTCGAGCCGGAACGAATGGGAACTTCCCCTTTCCGACCTCCCTTTGGTCGCCGGCCGCTCTTCGCGTG
CCGTCATCGGTTCGATCCTCGCTCGGTTCGTGTAATTCGGCTTTTCTCGTTAATGGGTTGTCGTCGTCGTCCCTTCCGAGTTCGTCGCGGCTCAGCTTCAGTTCTCGCTCGTCGGGTGTG
TATGCTAGAGCTGCCACTGAGAAGACCCTCTACGATTTCAGCGTGAAG
AGGTATCGAATTTCTCTTCTGGGTGTATCTGAAATTGGTATTTGGAGAGATCTTCTTTTTTGGGTCGTCAGG
GAACTTTGTAATTCACTTAGATACGGTGTTTTTATGTATTTATTTATCTTCGGTAGAATCAAGCAATTCTGATGGCTTGCCCTAGCTACTTTGGAAATTAGAAAAAAATATATATCTTAA
TTGTCTCAGCCGCCACACTGTTTTTTGCATCTTCTCTGTTCTATTGTTACTTTTGGATGACGAGGAAGCACATTTTAGCTACTTAACATTGGTGCTTCCAATTTGGACTAAAAGAAATCA
AGCTGGAGTTGAGGTCGCTTATTTGCTCTTTGTTCATGAATTGAACTAATTTGCAAATTCTCCACGGTATGCAAATCCTTAGAATTAAGATTCATGCTGTTGTGGCTAAAAATTCTTCGT
TGTTTTGGCACCTGCTATGTTTCGGTAATTTATGTGGACATTATTATACTATTCATTTTTCGGTTTACATACTGAATTTTGGGTAAAGCTGCTTTATTCATGATAATTGCTAATTGCTGC
ACACATTTTTCTTCATGGTTCAGGACATTGATAGGAATGATGTTTCATTGAGCAAATTCAAGGGAAAAGTCTTATTAATTGTGAACGTAGCTTCGAAATGTGGTAATTGCTTTATCTCCT
TCAGTTGTCTGATTTAATTTATCAGATTCACAGTCTCATTGAAGAATTTTCTTGTGATTCAGTGGTTTAACGACATCAAACTACAAGGAGCTCTCGCACGTATATGAGAAGTACAAGACT
CAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTCGGCCCCTTTCTCGGCCGCTTTCTCCGCCCCTTCGTACGGCTTCCGTCGAGCCGGAACGAATGGGAACTTCCCCTTTCCGACCTCCCTTTGGTCGCCGGCCGCTCTTCGCGTG
CCGTCATCGGTTCGATCCTCGCTCGGTTCGTGTAATTCGGCTTTTCTCGTTAATGGGTTGTCGTCGTCGTCCCTTCCGAGTTCGTCGCGGCTCAGCTTCAGTTCTCGCTCGTCGGGTGTG
TATGCTAGAGCTGCCACTGAGAAGACCCTCTACGATTTCAGCGTGAAG
GACATTGATAGGAATGATGTTTCATTGAGCAAATTCAAGGGAAAAGTCTTATTAATTGTGAACGTAGCTTCG
AAATG
TGGTTTAACGACATCAAACTACAAGGAGCTCTCGCACGTATATGAGAAGTACAAGACTCAA

Retrieve as FASTA