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Entry information : BrPrx50-1Ab_other (Bra017830)
Entry ID 11239
Creation 2012-07-24 (Christophe Dunand)
Last sequence changes 2012-07-24 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx50-1Ab_other (Bra017830)
Name (synonym) BrPrx50-1Ab_other (Bra017830)
Class Class III peroxidase     [Orthogroup: Prx015]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx50-1Ab_other
start..stop		 S start..stop
BrPrx50-1Aa_other 580 0 1..326 1..326
BoPrx50_other 580 0 1..326 1..326
TsPrx51 579 0 20..326 22..328
ThPrx51 579 0 20..326 22..328
Literature and cross-references BrPrx50-1Ab_other (Bra017830)
Protein sequence: BrPrx50-1Ab_other (Bra017830)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (304)
PWM (Da):   %s   35597.02 (33226.6)  
PI (pH):   %s   8.56 (8.39) Peptide Signal:   %s   cut: 23 range:23-326
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATKNLLLLL LSLFSTLNLV TAQLSRNFYA GSCPNVEQIV RNAVQQKIQQ TFTTIPATLR LYFHDCFVNG CDASVMIAST DNNKAEKDHP DNLSLAGDGF DTVIKAKQAL DAVANCRNKV  SCADILTIAT RDVVNLAGGP RYEVELGRRD GLSSTADSVE GKLPHPTDNV NQLTSLFAKN GLSRKDMIAL SGAHTLGFAH CKLVFNRIYN FNSTTQVDPT VNKDYVAALQ GSCPRNVDPS 
VAINMDPTTP RQFDNVYYQN LQQGKGLFTS DQDLFTDSRS KPIVNLWASN AKLFNQDFVN SMIKLGRVGV KTGRNGNIRR DCGAFN 

Retrieve as FASTA  
Remarks Complete or pseudogene from genomic (frame shift in the PS . Incorrectprediction from Phytozome;: exon 1 and part of exon 2 are missing.