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Entry information : EguPrx[P]06
Entry ID 11557
Creation 2012-12-05 (Qiang Li)
Last sequence changes 2013-01-22 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-22 (Christophe Dunand)
Peroxidase information: EguPrx[P]06
Name EguPrx[P]06
Class Class III peroxidase     [Orthogroup: Prx046]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus gunnii    [TaxId: 3933 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EguPrx[P]06
start..stop		 S start..stop
EgrPrx[P]06 262 1.23e-89 1..140 1..140
EgrPrx[P]11 241 1.51e-81 1..140 1..140
EglPrx[P]06 233 1.62e-78 1..140 1..145
EcamPrx05 195 4.05e-65 1..139 1..144
Literature and cross-references EguPrx[P]06
Protein sequence: EguPrx[P]06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   138 (118)
PWM (Da):   %s   15078.61 (12922.5) Transmb domain:   %s   i5-27o
PI (pH):   %s   4.81 (4.60) Peptide Signal:   %s   cut: 21 range:21-138
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTPSRLWQLL LSALAVVSSC *VQHNANAAA TMEPP*KLQW LYYQNSCPDA EKYVRDQVEF YSKQDRTLAL KLIRLLYSDC FVTGCNASIL LDGPIQNAAL LGLPMEMTDK VKEVLEQHCP 
GDVSCxDIIN LSAKDAVVLV 

Retrieve as FASTA  
Remarks Pseudogene from genomic (stops in frame). Scaffold_1_39 (697..76)
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACACCAT CAAGGTTGTG GCAGTTGTTG CTATCGGCGC TCGCGGTGGT GAGCTCATGC TAGGTGCAGC ACAATGCCAA CGCGGCAGCG ACAATGGAAC CGCCGTAGAA GCTGCAGTGG  CTTTACTACC AGAACTCATG CCCTGACGCT GAGAAGTACG TGAGGGACCA GGTCGAGTTC TACTCGAAGC AGGACAGGAC CCTTGCTCTC AAGCTCATCC GACTACTCTA CTCCGACTGC  TTCGTCACCT TATGTGTCGT CTGTTTTTTT TCCCCTCTCT TGGACGATCT TGAAATCTGT ATCGCTTCAA TATCAAGTTT CCTTCACCTT TCTATGCACG TGATATCCTA ACGGTTTAAA  CCTCTCGAAC TGGGCTTTCT AACGnnnnnn nnnnnnnnnn nnnnnnnTCG AACTGGGCTT TCTAACGTAC CACTCTTTTG CGTATAAAAC TGGGGTGCAA TGCGTCAATT CTATTGGACG  GGCCTATTCA GAATGCAGCG CTTCTAGGGC TTCCTATGGA GATGACTGAC AAGGTCAAGG AAGTCCTGGA ACAGCATTGT CCCGGGGACG TCTCTTGCAC nGACATAATC AACCTCTCTG 
CTAAAGATGC TGTGGTCTTG GTA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACACCAT CAAGGTTGTG GCAGTTGTTG CTATCGGCGC TCGCGGTGGT GAGCTCATGC TAGGTGCAGC ACAATGCCAA CGCGGCAGCG ACAATGGAAC CGCCGTAGAA GCTGCAGTGG  CTTTACTACC AGAACTCATG CCCTGACGCT GAGAAGTACG TGAGGGACCA GGTCGAGTTC TACTCGAAGC AGGACAGGAC CCTTGCTCTC AAGCTCATCC GACTACTCTA CTCCGACTGC  TTCGTCACCG GGTGCAATGC GTCAATTCTA TTGGACGGGC CTATTCAGAA TGCAGCGCTT CTAGGGCTTC CTATGGAGAT GACTGACAAG GTCAAGGAAG TCCTGGAACA GCATTGTCCC 
GGGGACGTCT CTTGCACnGA CATAATCAAC CTCTCTGCTA AAGATGCTGT GGTCTTGGTA 

Retrieve as FASTA