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Entry information : GmarCIIBC14
Entry ID 11886
Creation 2013-05-23 (Nizar Fawal)
Last sequence changes 2013-05-23 (Nizar Fawal)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarCIIBC14
Name GmarCIIBC14
Class Other class II peroxidase type C    [Orthogroup: CIIBC001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarCIIBC14
start..stop		 S start..stop
GmarCIIBC12 630 0 1..354 1..354
GmarCIIBC10 612 0 1..358 1..360
GmarCIIBC 590 0 1..354 1..354
GmarCIIBC09 588 0 1..358 1..360
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11886' 'complement(join(53365..53377,53438..53502,53564..53641,53703..53791,53846..54012,54068..54082,54143..54183,54241..54457,54510..54575,54628..54640,54699..54754,54807..54813,54872..54991,55045..55171))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 55045..55171 125 N° 2 54872..54991 118 N° 3 54807..54813 5 N° 4 54699..54754 54
N° 5 54628..54640 11 N° 6 54510..54575 64 N° 7 54241..54457 215 N° 8 54143..54183 39
N° 9 54068..54082 13 N° 10 53846..54012 165 N° 11 53703..53791 87 N° 12 53564..53641 76
N° 13 53438..53502 63 N° 14 53365..53377 11  
complement(join(53365..53377,53438..53502,53564..53641,53703..53791,53846..54012 ,54068..54082,54143..54183,54241..54457,54510..54575,54628..54640,54699..54754,5 4807..54813,54872..54991,55045..55171))


exon

Literature and cross-references GmarCIIBC14
DNA ref. JGI genome:   scaffold_65 (55171..53365)
Cluster/Prediction ref. JGI gene:   162345
Protein sequence: GmarCIIBC14
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (335)
PWM (Da):   %s   37487.02 (35183.8) Transmb domain:   %s   o272-294i
PI (pH):   %s   5.59 (5.32) Peptide Signal:   %s   cut: 23 range:23-357
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAFARLSTIVSIALVASQTANAALTKRVTCASGHVTANAACCALFPIVDQIQKDLFDGGECGEEAHSALRLVFHDAIGFSIYGGKGGGADGSILAFNETETAFHANGGIDDIVARQFPVF
LETKLSAGDFVHLAGAIGTANCAGAPRLQFKFGRPPPKAAAPDLTIPEPTDSVTKILARFADAGFSPQEAVALLASHTIAAADEVDTTIPGTPFDSTVSTFDTQVFLEVLLKGNLFPGNG
SQVGEVLSPLHGEMRLQSDFAISQDRRTACFWQQMINNQNFMMSQFKAAMAKLQVLGQRNLIDCSDVVPIPKPFTSAIKFPASFSKKDVQIACPQLAFPSLATVAGPAPTIPPVPGS*

Retrieve as FASTA  
Remarks complete sequence from genomics (13 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCGCTCGGCTTTCGACTATTGTCTCTATTGCTCTCGTAGCATCACAGACCGCCAACGCCGCTCTTACCAAGCGCGTTACTTGCGCATCGGGCCATGTCACCGCGAATGCTGCC
TGCTGCGGTACGCATACTAAAATTTTCATGACGTTCCTCCTCTTATCCCAACGAGTGTAGCCCCCTTTTCCCCATCGTCGATCAAATCCAGAAGGATCTCTTCGACGGTGGCGAGTGTGG
TGAGGAGGCTCACTCTGCGCTCCGCCTCGTGTTCCATGATGCTATTGGGTTCTCCATTTACGGTGAGTGCACCTTTTCTTTCTTCCTCGGATTCAATAACTTACTCTGTCCTGAAATTAG
GCGCGGGAAGTTCGTCGTCGTTTTGAAAAATTTAACCGGAAATCTACTAACTATTTTATAGAGAGGCGGCGGTGCCGATGGCTCCATCTTGGCCTTCAACGAGACAGAGACCGCTTTCCG
TAAGTACACACAAAAGATCGAAATACGAAACCTTCCTGAATCGTTGATTTTCTCCAGACACGCTAATGGAGGGTGAATAATAGTCTCCCTACCAAGTATACAAATATCTAATAGTCATGT
CCAGCACATCGACGATATCGTCGCTCGCCAGTTCCCTGTCTTCTTGGAGACGAAATTAAGCGCCGGTGACTTGTAAGCGTGCCTAAAACTCTCTGAACAATTCGTTCTTACCTCTTATAC
AAAGCGCGTCCATCTCGCCGGTGCTATCGGCACAGCCAATTGCGCAGGTGCCCCCCGACTTCAATTCAAGTTCGGTCGCCCGCCACCAAAAGCCGCTGCTCCCGATCTTACCATCCCAGA
GCCGACCGATAGTGTCACCAAGATCTTGGCCCGCTTCGCCGATGCCGGGTTTTCTCCGCAGGAGGCTGTTGCCCTCCTTGCGTCTCACACCATCGCTGCAGCCGTGAGTTCGAATAAAAG
CTTCTTTGGTTAATGGTTTATTGACAGTAAAATAATCCAGGAGATGAGGTCGACACGACTATCCCTGGGACTCCGTTCGATTCGTAAGTCTCGAATATATACAATTGTAGTATCAAATCT
CTGATATGGTTTTCAAATTCCAGCACACTGTCAGCACTTTGTAGACAAAAAAAACACTTTATATCAGTGACATACGCCTGACACATCTTAAATAGTGTGACACCCAAGTCTTCCTTGAGG
TTCTCCTCAAAGGTAACCTGTTCCCAGGGAACGGCTCTCAAGTCGGCGAAGTCCTTTCCCCACTCCACGGAGAGATGCGTCTCCAAAGCGATTTCGCTATTTCTCAGGACAGGAGAACCG
CCTGCTTCTGGCAGCAAATGATCAGTGAGTCGGGTCTATGTTTCCAAGTGCAAACGCTGAGGGAGGGACGATGAACAGACACAATCAGAACTTTATGATGTCCCAATTCAAGGCTGCCAT
GGCTAAACTGCAGGTCCTCGGCCAGAGGAACCTTATTGACTGCTCGGATGTGCGTATATTTATTAGCAGACGCTGTTTATTGCTGACCCCGTAGTATTATTACTCTGCAGGTGTCGTTCC
CATTCCAAAGCCATTTACTAGCGCCATCAAATTCCCAGCCAGCTTCTCGAAGAAAGACGTCCAGATTGCCGTGAGCTCCTCTCTAAAATTTTGCCTTTTTTCGCGATTCAATTCCTCTCT
CTTATGATCAGTGTGTCCACAACTGGCCTTTCCCAGCCTCGCTACCGTCGCTGGTCCAGCCCCAACTATACCCCCCGTGTCAGTCCATTCCTAATTTTCTGATCTCACCGACCTCTGACG
ACTGTTTTATTCCGACAGCCCCCCGGCTCTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTTCGCTCGGCTTTCGACTATTGTCTCTATTGCTCTCGTAGCATCACAGACCGCCAACGCCGCTCTTACCAAGCGCGTTACTTGCGCATCGGGCCATGTCACCGCGAATGCTGCC
TGCTGCGCCCTTTTCCCCATCGTCGATCAAATCCAGAAGGATCTCTTCGACGGTGGCGAGTGTGGTGAGGAGGCTCACTCTGCGCTCCGCCTCGTGTTCCATGATGCTATTGGGTTCTCC
ATTTACGGCGGGAAAGGCGGCGGTGCCGATGGCTCCATCTTGGCCTTCAACGAGACAGAGACCGCTTTCCACGCTAATGGAGGCATCGACGATATCGTCGCTCGCCAGTTCCCTGTCTTC
TTGGAGACGAAATTAAGCGCCGGTGACTTCGTCCATCTCGCCGGTGCTATCGGCACAGCCAATTGCGCAGGTGCCCCCCGACTTCAATTCAAGTTCGGTCGCCCGCCACCAAAAGCCGCT
GCTCCCGATCTTACCATCCCAGAGCCGACCGATAGTGTCACCAAGATCTTGGCCCGCTTCGCCGATGCCGGGTTTTCTCCGCAGGAGGCTGTTGCCCTCCTTGCGTCTCACACCATCGCT
GCAGCCGATGAGGTCGACACGACTATCCCTGGGACTCCGTTCGATTCCACTGTCAGCACTTTTGACACCCAAGTCTTCCTTGAGGTTCTCCTCAAAGGTAACCTGTTCCCAGGGAACGGC
TCTCAAGTCGGCGAAGTCCTTTCCCCACTCCACGGAGAGATGCGTCTCCAAAGCGATTTCGCTATTTCTCAGGACAGGAGAACCGCCTGCTTCTGGCAGCAAATGATCAACAATCAGAAC
TTTATGATGTCCCAATTCAAGGCTGCCATGGCTAAACTGCAGGTCCTCGGCCAGAGGAACCTTATTGACTGCTCGGATGTCGTTCCCATTCCAAAGCCATTTACTAGCGCCATCAAATTC
CCAGCCAGCTTCTCGAAGAAAGACGTCCAGATTGCCTGTCCACAACTGGCCTTTCCCAGCCTCGCTACCGTCGCTGGTCCAGCCCCAACTATACCCCCCGTCCCCGGCTCTTAG

Retrieve as FASTA