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Entry information : GmarAPx-CcP10
Entry ID 11919
Creation 2013-05-27 (Christophe Dunand)
Last sequence changes 2013-05-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-04-19 (Catherine Mathe (Scipio))
Peroxidase information: GmarAPx-CcP10
Name GmarAPx-CcP10
Class Hybrid Ascorbate-Cytochrome C peroxidase    [Orthogroup: APx-CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Cortinariaceae Galerina
Organism Galerina marginata    [TaxId: 109633 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmarAPx-CcP10
start..stop		 S start..stop
HsubAPx-CcP02 864 0 9..563 6..559
HcyAPx-CcP02 864 0 20..608 21..610
LameAPx-CcP01 777 0 1..575 1..566
LbiAPx-CcP 775 0 1..575 1..574
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11919' 'join(537483..537698,537758..537844,537899..537965,538031..538355,538415..538528,538578..538752,538808..539647)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 537483..537698 214 N° 2 537758..537844 85 N° 3 537899..537965 65 N° 4 538031..538355 323
N° 5 538415..538528 112 N° 6 538578..538752 173 N° 7 538808..539647 838  
join(537483..537698,537758..537844,537899..537965,538031..538355,538415..538528, 538578..538752,538808..539647)


exon

Literature and cross-references GmarAPx-CcP10
DNA ref. JGI genome:   scaffold_19 (537483..539647)
Cluster/Prediction ref. JGI gene:   251405
Protein sequence: GmarAPx-CcP10
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   608 (586)
PWM (Da):   %s   66478.91 (63973.5)  
PI (pH):   %s   4.79 (4.72) Peptide Signal:   %s   cut: 23 range:23-608
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRGLPLVFSLYLLSLVTPFSSAYTWPSPQYDTLEALLYEGRRSDGSSLSSLVHPCRKRTGTLASVPAEWLRFAFHDMATHNVDNGMGGLDGSIAYELDRAENFGLGFNQTLSDFEAYPNK
LVSRADIFAIGAIMAVNTCGGPILPFRGGRIDAWSAGGTGTPEPQQDLPTLTESFRKQGYSQSEMIKLVACGHTMGGVRSADFPQLVAPDPNSIYPVIKNFDTTTEKFDNAVVTEYLNGS
TQNLLVVSANQTMDSDLRVFQSDNNSTIRSMADNTVFQSECQSILTRMIDTVPASVTLTDEITLLPAKVTYAQLTFEKNQFIFKTNFRLTQAINATANANRNVTLFWCDRYGDNQNCAHK
TSTALPVNKVADDPGVSPVTQTLGYYFLNYNFVIPINTNTSIAKFWFEVDEHDGSKVTTYNNGGSNYVIDQDQVLFVPMSSHMSIVPNTTATQTYTNRVGDGNTRHYSLVIAVRDGTNPS
RVYVDGTDVAVQGFPFPVNLQVDFTLNSSIPALAGYSFYTGTADSAGVQLSMDVHAVTSSQTYTQTFQQTLLLDNTPYVKPGTTTTTASKSAAGRMAVPLMGIDLWNTLLVLPGVFFYLN
GNLLDLVL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGCGGGCTTCCTTTAGTCTTCTCTCTCTATCTTTTATCTCTCGTTACCCCCTTTTCTTCTGCCTACACATGGCCTTCGCCACAATATGATACTCTTGAAGCCCTTTTGTATGAAGGT
CGCCGCTCCGATGGCTCCAGCCTCTCTTCTCTCGTCCATCCATGTCGGAAACGAACGGGAACTCTCGCCTCAGTTCCTGCTGAATGGCTTCGTTTTTTGTGCGTAATCGATTTGTTTCTG
GCCATATTCTCTGTTTTGAATGTTGGATACACTACAGGCTTTTCACGACATGGCAACCCATAACGTTGACAATGGCATGGGTGGATTGGATGGTTCAATTGCGTACGAACTTGACCGTGC
GGAGAGGTGTGTTATTAAAAATAAGACTGTGCAAGGGCTGGAATGACCGCTTTCTTCCAGAACTTTGGTCTCGGCTTCAACCAGACCTTAAGTGACTTCGAGGCCTATCCTAATAAACTA
GTCTCCACAGTGCGTTTCCTTCCGCCAGTAGTCTAGGTCCTTAACTCAATAGTGACCATTCCTTCGTGGTTCAGGAGCCGATATCTTTGCCATAGGCGCCATCATGGCTGTAAACACGTG
CGGCGGGCCCATTCTTCCATTTCGTGGCGGCCGTATCGATGCTTGGTCGGCTGGTGGTACCGGCACGCCTGAGCCCCAGCAAGACCTTCCGACTCTTACAGAGAGCTTCAGAAAGCAGGG
GTACAGTCAAAGCGAGATGATCAAACTCGTTGCCTGCGGCCATACTATGGGTGGTGTCAGGAGCGCCGACTTTCCCCAGCTCGTTGCGCCTGACCCCAACTCTATTTATCCAGTTATCAA
GAACTTTGACACCACTACCGAAAAATTTGATAATGCTGTGTGTAACCTTCGGTTTACTTCTCTTCATACGACGTCGTATTGACTTTTTTTTCGCTCTCAGTGTCACAGAATATCTCAATG
GATCTACGCAAAATCTCCTCGTTGTTAGCGCGAACCAAACCATGGACTCTGATCTCCGCGTATTTCAGAGTGATAATAACAGCACGATTCGGAGAGGTCAGTGACAACACTGTTTTATCT
CGGTTGCCCTTATATTGTTTATTAGTATGGCAGATAACACAGTCTTTCAGTCAGAGTGTCAGAGTATTCTGACACGTATGATTGACACTGTACCGGCATCTGTAACCCTGACGGACGAAA
TTACTCTTCTGCCTGCCAAAGTCACTTACGCACAACTCACATTTGAGAAAAATCAGTTTATCTTCAAGACAAATTTCCGCGCGTATGTTCCTTTCCTCTACTGTGTTATTGCGATTCAAT
CTAATCAATCGATATAGTTGACGCAAGCTATCAATGCCACAGCAAACGCTAATCGCAATGTCACCTTGTTCTGGTGTGACAGATATGGCGATAACCAAAACTGTGCTCACAAGACCAGCA
CTGCGTTGCCCGTCAACAAGGTTGCAGATGACCCAGGCGTGTCGCCAGTTACCCAAACTCTCGGGTACTACTTCTTGAACTACAATTTTGTCATTCCTATCAACACCAATACCTCAATTG
CTAAATTTTGGTTTGAGGTGGACGAACATGATGGAAGCAAGGTGACAACCTACAATAACGGTGGCAGCAACTACGTTATCGATCAGGATCAGGTCCTCTTCGTCCCTATGTCTAGTCACA
TGTCTATTGTCCCCAACACTACTGCTACCCAAACCTACACGAACAGAGTTGGTGACGGCAACACTCGTCATTATTCTCTCGTCATCGCCGTGCGGGATGGCACGAACCCCTCACGGGTGT
ACGTGGATGGGACTGATGTGGCCGTCCAGGGATTCCCTTTCCCAGTCAACTTGCAAGTCGACTTTACGTTGAACTCTTCGATACCTGCATTAGCTGGGTACTCCTTCTACACCGGCACCG
CCGATTCGGCGGGTGTACAGTTGAGCATGGATGTTCATGCCGTTACCTCGTCGCAAACGTATACCCAGACCTTCCAGCAGACCCTCCTGCTTGATAATACGCCATATGTGAAACCTGGAA
CTACGACCACCACTGCCTCCAAAAGTGCTGCAGGTCGGATGGCTGTGCCGTTGATGGGAATCGACTTATGGAACACACTGCTCGTCCTTCCGGGGGTGTTCTTCTACCTAAACGGGAACT
TGCTGGATCTTGTTCTG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGCGGGCTTCCTTTAGTCTTCTCTCTCTATCTTTTATCTCTCGTTACCCCCTTTTCTTCTGCCTACACATGGCCTTCGCCACAATATGATACTCTTGAAGCCCTTTTGTATGAAGGT
CGCCGCTCCGATGGCTCCAGCCTCTCTTCTCTCGTCCATCCATGTCGGAAACGAACGGGAACTCTCGCCTCAGTTCCTGCTGAATGGCTTCGTTTTGCTTTTCACGACATGGCAACCCAT
AACGTTGACAATGGCATGGGTGGATTGGATGGTTCAATTGCGTACGAACTTGACCGTGCGGAGAACTTTGGTCTCGGCTTCAACCAGACCTTAAGTGACTTCGAGGCCTATCCTAATAAA
CTAGTCTCCAGAGCCGATATCTTTGCCATAGGCGCCATCATGGCTGTAAACACGTGCGGCGGGCCCATTCTTCCATTTCGTGGCGGCCGTATCGATGCTTGGTCGGCTGGTGGTACCGGC
ACGCCTGAGCCCCAGCAAGACCTTCCGACTCTTACAGAGAGCTTCAGAAAGCAGGGGTACAGTCAAAGCGAGATGATCAAACTCGTTGCCTGCGGCCATACTATGGGTGGTGTCAGGAGC
GCCGACTTTCCCCAGCTCGTTGCGCCTGACCCCAACTCTATTTATCCAGTTATCAAGAACTTTGACACCACTACCGAAAAATTTGATAATGCTGTTGTCACAGAATATCTCAATGGATCT
ACGCAAAATCTCCTCGTTGTTAGCGCGAACCAAACCATGGACTCTGATCTCCGCGTATTTCAGAGTGATAATAACAGCACGATTCGGAGTATGGCAGATAACACAGTCTTTCAGTCAGAG
TGTCAGAGTATTCTGACACGTATGATTGACACTGTACCGGCATCTGTAACCCTGACGGACGAAATTACTCTTCTGCCTGCCAAAGTCACTTACGCACAACTCACATTTGAGAAAAATCAG
TTTATCTTCAAGACAAATTTCCGCTTGACGCAAGCTATCAATGCCACAGCAAACGCTAATCGCAATGTCACCTTGTTCTGGTGTGACAGATATGGCGATAACCAAAACTGTGCTCACAAG
ACCAGCACTGCGTTGCCCGTCAACAAGGTTGCAGATGACCCAGGCGTGTCGCCAGTTACCCAAACTCTCGGGTACTACTTCTTGAACTACAATTTTGTCATTCCTATCAACACCAATACC
TCAATTGCTAAATTTTGGTTTGAGGTGGACGAACATGATGGAAGCAAGGTGACAACCTACAATAACGGTGGCAGCAACTACGTTATCGATCAGGATCAGGTCCTCTTCGTCCCTATGTCT
AGTCACATGTCTATTGTCCCCAACACTACTGCTACCCAAACCTACACGAACAGAGTTGGTGACGGCAACACTCGTCATTATTCTCTCGTCATCGCCGTGCGGGATGGCACGAACCCCTCA
CGGGTGTACGTGGATGGGACTGATGTGGCCGTCCAGGGATTCCCTTTCCCAGTCAACTTGCAAGTCGACTTTACGTTGAACTCTTCGATACCTGCATTAGCTGGGTACTCCTTCTACACC
GGCACCGCCGATTCGGCGGGTGTACAGTTGAGCATGGATGTTCATGCCGTTACCTCGTCGCAAACGTATACCCAGACCTTCCAGCAGACCCTCCTGCTTGATAATACGCCATATGTGAAA
CCTGGAACTACGACCACCACTGCCTCCAAAAGTGCTGCAGGTCGGATGGCTGTGCCGTTGATGGGAATCGACTTATGGAACACACTGCTCGTCCTTCCGGGGGTGTTCTTCTACCTAAAC
GGGAACTTGCTGGATCTTGTTCTG

Retrieve as FASTA