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Entry information : LuAPx137 (Lus10025680|PACid:23145012)
Entry ID 12040
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2013-10-11 (Qiang Li)
Peroxidase information: LuAPx137 (Lus10025680|PACid:23145012)
Name (synonym) LuAPx137 (Lus10025680|PACid:23145012)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuAPx137
start..stop		 S start..stop
LuAPx97 858 0 1..435 1..434
MeAPx05 670 0 1..435 1..429
PtAPx07 647 0 1..434 1..424
PtAPx08 641 0 70..434 45..409
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 956152..956409 256 N° 2 955959..956066 106 N° 3 955759..955879 119 N° 4 955494..955594 99
N° 5 955279..955366 86 N° 6 954939..955006 66 N° 7 954764..954850 85 N° 8 954288..954362 73
N° 9 954115..954192 76 N° 10 953930..954034 103 N° 11 953785..953847 61 N° 12 952914..953066 151
complement(join(952914..953066,953785..953847,953930..954034,954115..954192,9542 88..954362,954764..954850,954939..955006,955279..955366,955494..955594,955759..9 55879,955959..956066,956152..956409))


exon

Literature and cross-references LuAPx137 (Lus10025680|PACid:23145012)
DNA ref. Phytozome 12:   scaffold145 (956409..952914)
Protein sequence: LuAPx137 (Lus10025680|PACid:23145012)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   434 (326)
PWM (Da):   %s   47345.01 (34606.6) Transmb domain:   %s   o414-433i
PI (pH):   %s   8.02 (3.97) Peptide Signal:   %s   cut: 24 range:24-349
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAHCPSHLQLSKSPQHHSPPPPFQMASSTLSTAAAATSSRLLLPSSSTTARAHIRQHLSTSSTHGFSPLKCIRSSPLPPFRAFSNQRRPLSAVAAASDPAQLKSAREDIKEILKSKFCHP
ILVRLGWHDAGTYNKDIEEFPMRGGANGSLRFDIELKHGANAGLVNALSLLQPIKEKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSAPEECPEEGRLPDAGPPSPADHLRKVF
YRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAEWLKFDNSYFKDIKAQIDEDLLVLPTDAAIFEDPSFKVYAEKYAEDQDAFFKDYAEAHAKLSNLGSKFD
PPEGIVLDGVQGEKFVAANYSYGKREFSDSMKQKMRAEYEAIGGSPSKALSSNYFLNIIIVISVLAVLTYLFGN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCACTGTCCATCTCACCTGCAACTATCCAAATCGCCGCAGCATCATTCGCCTCCACCACCATTTCAAATGGCTTCTTCAACTCTCAGCACGGCCGCCGCCGCCACGTCCTCTCGC
CTCCTCCTCCCTTCCTCCTCCACCACCGCTCGTGCTCACATCCGCCAACACCTCTCAACTTCTTCCACTCACGGCTTCTCTCCTCTCAAATGCATTCGATCCTCTCCTCTCCCTCCGTTT
CGCGCCTTCTCCAACCAGGTCCTCCTCTTCCTTCATTTTCTTTGTATTCAGCTTCCGTTTGCTTATTGTACGTCGCTTAATGCTGTTCTTATGGAATTTGCAGAGAGGAGGCCGTTGAGC
GCGGTCGCTGCTGCGTCCGATCCTGCTCAGTTGAAGAGCGCTAGGGAGGATATCAAGGAGATTCTCAAGTCCAAGTTCTGTCATCCGATTCTGGTGCTTGTTGCCTTCTGCTTGTATTTT
ATTGACTTCCGTTTGTTTTTCTTCTTGTATTTGAACTGTTGTTCTTCTATAGGTGTTCGATTGGGGTGGCATGATGCCGGGACGTACAACAAGGACATCGAGGAGTTCCCGATGAGAGGT
GGAGCTAACGGAAGTCTTCGATTCGATATTGAGCTCAAGCACGGTGCAAATGCTGGTATAAACTTCTTCCTGACTATGTTGCAGTTGTAGTTTGCCTTTTGAATTTCTGAGCTGGTGAAG
AGTAGAGGAGAATCACGCAAGTGGTGACGGTTTCTTGCTGTTTGGATAGAATGTATCCTGTCATCTGCTGATGGATTGGATTGTGTGATCTCATTTCAGGGGGCTTGTCAATGCATTGAG
TCTGCTTCAACCTATCAAAGAAAAGTATTCTGGTGTTACCTATGCTGATTTGTTCCAGTTAGCTAGTGCTACTGCCATTGAGGTAGGACATTTGCTCTTAACGTGCTGATTATTGGAGCT
CAAGTTGTTCTCAAGCAAGAAGAAAGAGTTGAATGCTCAATACTAAACTGTAGTTGTTGATATTACATTATGTGGATTGATTATCTTAGGAGAAGCTGGCGGGCCTAAAATCCCAATGAA
ATATGGAAGGGTAGATGTCTCTGCTCCAGAGGAATGCCCAGAGGAGGGAAGACTTCCTGGTGAGTGTGCTAAACTTGCTGCTATTGTGCCTGAAAAAATTCGAGTTAAATGTACTGCGAT
GGCTTTTTAGAAGGTGAACATTTTAGTTTTGTGAGATTCTTCATTCCTGGGGATAAAAACGAATATGAATACTGGGAATGAGATCTGGGATCACCAGCTGACACGATTTTGTAACATGTT
AGAGTGACTTAAGATTTTATCATTGTCTCTGGAAAAGGAGTTTGGTTTTTGCTTGAATCTTTTATAATGAATGGGCACATTTAATTCTCAGATATGCTGGCCCCCCAAGTCCTGCCGATC
ATTTACGAAAGGTGTTTTACCGAATGGGACTAAATGACAAGGTGATGATGGTTTTTCATATGCTGTGGATGGCTTCTCAACATGCTTGTGATACTATTTCTCAACTGTATTATACACCTC
CATATTCAGGAGAAATAGTTGCATTGTCTGGTGCACACACCTTGGGAAGGTCCAGACCAGATCGTAGTGGTTGGGGAAAGCCAGAGACTAAGTATACGGTATGAAACTAATACGATCTGA
TGTGACTTTGTATGACGAGAATCAAGAATCTGTATGCCTCATCTTGTAACGAGGTTACAAAATTCACCGCCATAGGTTGGAAAATGTCCAAAGAGAATGTTGCTTGTCAAACAAAAATAG
TATATCTATTGACATCAAAACGTCCATTGTACAATTTTGCTTGCCAGACCTCCTAAAGATAAAAAGTCTGTATTGTTTGCAAGTCTTCGTAGGGAAAACATTGAGTAGCCTGATAAAAAT
TTCATTTGCCATTTGACTTGCCGTCTAGACACAAGTCAGTTGGAAGTGGAACGAATCGCAATCGTGATGTTAGCAATTATTGACCATATCAAGCTAAGAAACAAGGTTTAGGGATTTACA
TTGTGTCTTGTTGTGGCAGAAAAAGATGGGCCTGGTGCACCTGGTGGTCAGTCGTGGACAGCAGAATGGCTGAAGTTTGATAATTCTTACTTCAAGGTATGAACCCGGAATGTAACTTTT
TGTGCTGTAGTTAAGCACCTTTATTATGAAGCCTGGAGTAAGGTCACGATGATGTCGGATTAACGATGCAGGAGATATCAAAGCACAAATAGATGAAGACCTACTTGTACTGCCAACTGA
TGCTGCTATTTTCGAAGATCCTTCATTCAAGGTGAAAGTGTCCGTCATCTTGATTGTAAATAGGGCGATTTTAGATAGCTTATTCAGCTAACTATACGTGATTTCTAACAGGTGTGTATG
CTGAGAAGTATGCTGAAGATCAGGATGCTTTCTTCAAGGACTATGCTGAAGCACATGCCAAGCTCAGCAACCTAGGATCTAAGTTCGACCCTCCTGAGGTATGTGTACCATAAACTCCTG
AAATCAAATCAGTCGATGCTCTAGCTACTTCAATGCACTAAATGGGCGATTTCTGAGCAGGGGGTATCGTATTGGACGGCGTTCAGGGTGAGAAGTTCGTGGCAGCTAATTACTCGTATG
GAAAGGTACGTCCTGCTACAACTATTTTACGTAGTTATGTTCTGTTAGTAGAGCTGTCAAAAATGGACCTGACCGAGTCCTGTCTCAGTCCGATAAAATCCCATCCATGATCCAAAATGA
ACATAAGTCAACAATATGAAACTTGCCAAATGCAAAAACCGATGAACTCACAACATCAAGTGATACATGATCCATTAGAGCTGTAACGCGATGAACTTGTGACCGGATAGACTCGCGACC
GATTGATCCTAACTCGATTAACCCACCCCATGACCCTCCTAATCCTTGACCATTCTACTGTCTAGCCAAAATATACACCATGTTTTCAAAGATGAAAGATATACCGAACAATACCGCTCA
ATGCCTGGCCGGAGTTGGTAGAACGCAGACTCGGACCGAGAGAGATCCACAACGTCTTCACCCTACGTTGGATTTCCCTATGCCATAACAAATGTCACACTCTATTTACTTTCTTCGAGT
ACAGTGAACTTATATATACAACATTTTATTCATTCATTTTCACTTTCCATGATTTGATGCAGGAGTAAGAAAGAAAAAAACAAGTAACCGTGTTTACTACTACGGCATCATATAGTAATA
GAAGGATGAATGAAGCCTATATGAAAACCCAATACTACAAGTTAAAAAAAGCTCAGGAAGACAAAGGAATAAAGGAAAAATTCAAAATGAGTATGTGTTTTACTACTTATTTTGGATTTG
CAGAGAGGGAGTTTTCAGACTCCATGAAGCAGAAGATGCGTGCAGAGTATGAAGCAATTGGTGGTAGCCCCAGTAAGGCTCTTTCGTCTAATTACTTCCTGAACATCATTATTGTCATCT
CTGTTCTTGCAGTTTTGACATATCTTTTTGGGAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCACTGTCCATCTCACCTGCAACTATCCAAATCGCCGCAGCATCATTCGCCTCCACCACCATTTCAAATGGCTTCTTCAACTCTCAGCACGGCCGCCGCCGCCACGTCCTCTCGC
CTCCTCCTCCCTTCCTCCTCCACCACCGCTCGTGCTCACATCCGCCAACACCTCTCAACTTCTTCCACTCACGGCTTCTCTCCTCTCAAATGCATTCGATCCTCTCCTCTCCCTCCGTTT
CGCGCCTTCTCCAACCAGAGGAGGCCGTTGAGCGCGGTCGCTGCTGCGTCCGATCCTGCTCAGTTGAAGAGCGCTAGGGAGGATATCAAGGAGATTCTCAAGTCCAAGTTCTGTCATCCG
ATTCTGGTTCGATTGGGGTGGCATGATGCCGGGACGTACAACAAGGACATCGAGGAGTTCCCGATGAGAGGTGGAGCTAACGGAAGTCTTCGATTCGATATTGAGCTCAAGCACGGTGCA
AATGCTGGGCTTGTCAATGCATTGAGTCTGCTTCAACCTATCAAAGAAAAGTATTCTGGTGTTACCTATGCTGATTTGTTCCAGTTAGCTAGTGCTACTGCCATTGAGGAAGCTGGCGGG
CCTAAAATCCCAATGAAATATGGAAGGGTAGATGTCTCTGCTCCAGAGGAATGCCCAGAGGAGGGAAGACTTCCTGATGCTGGCCCCCCAAGTCCTGCCGATCATTTACGAAAGGTGTTT
TACCGAATGGGACTAAATGACAAGGAAATAGTTGCATTGTCTGGTGCACACACCTTGGGAAGGTCCAGACCAGATCGTAGTGGTTGGGGAAAGCCAGAGACTAAGTATACGAAAGATGGG
CCTGGTGCACCTGGTGGTCAGTCGTGGACAGCAGAATGGCTGAAGTTTGATAATTCTTACTTCAAGGATATCAAAGCACAAATAGATGAAGACCTACTTGTACTGCCAACTGATGCTGCT
ATTTTCGAAGATCCTTCATTCAAGGTGTATGCTGAGAAGTATGCTGAAGATCAGGATGCTTTCTTCAAGGACTATGCTGAAGCACATGCCAAGCTCAGCAACCTAGGATCTAAGTTCGAC
CCTCCTGAGGGTATCGTATTGGACGGCGTTCAGGGTGAGAAGTTCGTGGCAGCTAATTACTCGTATGGAAAGAGGGAGTTTTCAGACTCCATGAAGCAGAAGATGCGTGCAGAGTATGAA
GCAATTGGTGGTAGCCCCAGTAAGGCTCTTTCGTCTAATTACTTCCTGAACATCATTATTGTCATCTCTGTTCTTGCAGTTTTGACATATCTTTTTGGGAACTAA

Retrieve as FASTA