View Redoxidase 12043

Entry information : LuAPx97(Lus10018155|PACid:23145192)

Entry ID	12043
Creation	2013-05-28 (Qiang Li)
Last sequence changes	2013-05-29 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2013-10-11 (Qiang Li)

Peroxidase information: LuAPx97(Lus10018155|PACid:23145192)

Name

LuAPx97(Lus10018155|PACid:23145192)

Class

Ascorbate peroxidase [Orthogroup: APx2002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Linaceae Linum

Organism

Linum usitatissimum (flax) [TaxId: 4006 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LuAPx97 start..stop	S start..stop
LuAPx137	858	0	1..434	1..435
MeAPx05	646	0	1..434	1..429
PtAPx07	622	0	1..433	1..424
PtAPx08	617	0	70..433	45..409

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12043' 'join(485293..485550,485636..485743,485823..485943,486108..486208,486336..486423,486698..486765,486854..486940,487344..487415,487532..487609,487690..487794,487878..487940,488646..488798)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	485293..485550	256	N° 2	485636..485743	106	N° 3	485823..485943	119	N° 4	486108..486208	99
N° 5	486336..486423	86	N° 6	486698..486765	66	N° 7	486854..486940	85	N° 8	487344..487415	70
N° 9	487532..487609	76	N° 10	487690..487794	103	N° 11	487878..487940	61	N° 12	488646..488798	151
join(485293..485550,485636..485743,485823..485943,486108..486208,486336..486423, 486698..486765,486854..486940,487344..487415,487532..487609,487690..487794,48787 8..487940,488646..488798)

Literature and cross-references LuAPx97(Lus10018155|PACid:23145192)

DNA ref.	Phytozome 12: scaffold112 (485293..488798)

Protein sequence: LuAPx97(Lus10018155|PACid:23145192)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	433
PWM (Da):	47132.03	Transmb domain:	o413-432i
PI (pH):	7.76

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAHCPSHLQLSKSPQHHSPPPPFQMASSTLSTAAAATSSRLLLPSSSTTARAHIRQHLSTSSTHVFSPLKGIRSSPLPPLRAFSNQRRPLSAVAGASDPAQLKSAREDIKEILKSKFCHP
ILVRLGWHDAGTYNKDIEEFPRRGGANGSLRFDIELKHGANAGLVNALSLLQPIKEKYSGVTYADLFQLASATAIEEAGGPKIPMKYGRVDVSAPEECPEEGRLPDAGPPSPADHLRKVF
YRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAEWLLDSRMAEDIKAQIDEDLLVLPTDAAIFEDPSFKVYAEKYAEDQDAFFKDYAEAHAKLSNLGSKFDP
PEGIILDGVQGEKFVAANYSYGKREFSDSMKQKMRAEYEAIGGSPNKALSSNYFLNIIIVISVLAVLTYLFGN*

Retrieve as FASTA

Remarks

Complete sequence from genomic. Correct prediction.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTCACTGTCCATCTCACCTGCAACTATCCAAATCGCCGCAGCATCATTCACCTCCACCACCATTTCAAATGGCTTCTTCAACTCTCAGCACCGCCGCCGCCGCCACGTCCTCTCGC
CTCCTCCTCCCTTCCTCCTCCACCACCGCTCGTGCTCACATCCGCCAACACCTCTCAACTTCTTCCACTCACGTCTTCTCTCCTCTCAAAGGCATTCGATCCTCTCCTCTCCCTCCGCTT
CGCGCCTTCTCCAACCAGAGGTCCTCCTCTTCCTTCCTTTGCTTTGTATTCAGCTTCCGTTTGCTTATTGTGCGTCGCTTAATGCTGTTCTTATGGAATTTGCAGAGGAGGCCGTTGAGC
GCGGTCGCTGGTGCGTCTGATCCTGCTCAGTTGAAGAGCGCTAGGGAGGATATCAAGGAGATTCTCAAGTCCAAGTTCTGTCATCCGATTCTGTGGTGCTTGTTGCCTTCTGCTTGTATT
TTATTGACTTCCGTTTGTTTTTCTTCTTGTATTTGAACTGTTGTTCTTCTATAGGTTCGATTGGGGTGGCATGATGCCGGGACGTACAACAAGGACATCGAGGAGTTCCCGAGGAGAGGT
GGAGCTAACGGAAGTCTTCGATTCGATATTGAGCTCAAGCACGGTGCAAATGCTGTGGTATAAACTTCTTCCTGACTATGTTGTAGTTGTAGTTTGCCTTTTGAATTTCTGAGCTGGTGA
AGAGTAGAGGAGAATCACGCAAGTGGTGACGGTTTCTTGCTGTTTGGATAGAATGTATCCTGTCATCTGCTGATGGATTGGATTGTGTGATCTCATTTCAGGGCTTGTCAATGCATTGAG
TCTGCTTCAACCTATCAAAGAAAAGTATTCTGGTGTTACCTATGCTGATTTGTTCCAGTTGGCTAGTGCTACTGCCATTGAGAGGTAGGACATTTGCTCTTAATGTGCTGATTATTGGAG
CTCAAGTTGTTCTCAAGCAAGAAGAAAGAGTTGAATGCCCGATACTAAACTGTAGTTGTTGATATTACATTATGTGGATTGATTATCTTAGGAAGCTGGCGGGCCTAAAATCCCAATGAA
ATATGGAAGGGTAGATGTCTCTGCTCCAGAGGAATGCCCAGAGGAGGGAAGACTTCCTGTGGTGAGTGTGCTAAACTTGCTGCTATTGTGCCTGGAAAAATTCGAGTTAAATGTACTGTG
ATGGCTGTTTAGAAGGTGAACATTTGAGTTCTGTGAGATTCTTCATTCCTGGGGATAAAAACGAATATGAATACTGGGAATGAGATCCGGGATCACCAGCTGACACGATTTTGTAACATG
TTAGAGGGACTTAAGATTTTATCATTGTTCTCTCTGGAAAAGGAGTCTGTTTTTTGCTTGAATCTTTTATAATGAATGGCACATTTAATTCTCAGATGCTGGCCCCCCAAGTCCTGCCGA
TCATTTACGAAAGGTGTTTTACCGAATGGGACTAAATGACAAGAGGTGATGATGGTTTTTCATATGCTGTGGATGGCTTCTCAACTTGCTTGTGATACTATTTCTCAACTGTGTTATACG
CCTCCATATTCAGGAAATAGTTGCATTGTCTGGTGCACACACCTTGGGAAGGTCCAGACCAGATCGTAGTGGTTGGGGAAAGCCAGAAACTAAGTATACGCGGTATGAAACTAATACGAT
CTGATGTGACTTTGTATGATGAGAATCAAGAATCTGTATGCCTCATCTTGTAACGAGGTTACAAAATTCACCGCCATCGGTTGGAAACTGTCCAAAGAGAATGTTGCTTGTCAAACAAAA
ATAGTATATCGATTGACATCAAAACGTCCATTGTACAATTTTGCTTGCCAGACCTCCTAAAGATAAAAAGTCTGTATTGTTTGCAAGTCTTCGTAGGGAAAACATTGAGTAGCCTGATAA
AAATTTCATTTGCCATTTGACACTTGCCGTCTCGACACAAGTCAGTTGGAAGTGGAACGAATCGCAATCGTGATGTTAGCAATTATTGACCATATCAAGCTAAGAAACAAGGTTTAGGGA
GTTACATTGTGTCTTGTTGTGGCAGAAAGATGGGCCTGGTGCACCTGGTGGTCAGTCGTGGACAGCAGAATGGCTGTTGGACAGCAGAATGGCTGAAAAGTTCGATAATTCTTACTTCAA
GGTATGAACCCAGAATGTAATTTTTCGTGCTGTAGTTAAGCACCTTATTATGAAGCCTGGAGTAAGGTCACGATGATGTCGGATTAACGATGCAGGATATCAAAGCACAAATAGATGAAG
ACCTACTTGTACTGCCAACTGATGCTGCTATTTTCGAAGATCCTTCATTCAAGAGGTGAAAGTGTCCGTCATCTTGATTGTAAATAGGGCGATTTTAGATAGCTTATTCAGCTAACTATA
CGTGATTTCTAACAGGTGTATGCTGAGAAGTATGCTGAAGATCAGGATGCTTTCTTCAAGGACTATGCTGAAGCCCATGCCAAGCTCAGCAACCTAGGATCTAAGTTCGATCCTCCTGAG
AGGTATGTGTACCATAAACTCCTGAAATCAAATCAGTCGATGCTCTAGCTACTTCAATACACTAAATGGGCGGATTTCTGAGCAGGGTATCATATTGGACGGCGTTCAGGGTGAGAAGTT
CGTGGCAGCTAATTACTCGTATGGAAAGAGGTACGTCCTGCTACAACTATTTTATGTAGTTATGTTCTGTTAGTAGAGCTGTCAAAAACTGACCCGGCCAAGTCCTGTCCCAGCCCGATA
AAATCCCATCAATGATCCAAAATGAACATAAGTCAACAACATGAAACTTGCCAAATGCAAAAACTGATGAACTCACAACCTCAAGTGATACATGATCCATTAGAGCTGTAACCCGATGAA
CTTGTGACCGGATAGACTCGCGACTGATTGATCGTAACTCGATTAACCCACCCCATGACCCTCCTAATCCTTGACCATTCTACTGTTTAGCCAAAATATACACTCTGTTTTCAAAGATGA
AAGATATACCAAACAATACCGCTCAATGCCTGGCCGGAGTCGGACCGAGAGAGATCCACAACGTCTTCTACGTTGGATTTCCTTATGTCATAACAAATGTCACACTCTATTTACTTTCTT
CAAGTACAGTGAACTTATATATACAACATAGTATTCATTCATTTTTCACTTTCCATGATTTGATGCAGGAGTAAGAAAGAAAAAAACAAGTAACCGTGTTTACTACTATGGTATCGTATC
ATATAATAATAGAAGGATGAATGAAGCCTATTTGAAAACCCAATACTACAAGTTAAAAAACAAACTCAGGAAGACAAGGAATAAAGGAAAAATTCAAAATGAGTATGTGTTTTACTACTT
ATTTTGGATTTGCAGAGGGAGTTTTCAGACTCCATGAAGCAGAAGATGCGTGCAGAGTATGAAGCAATTGGTGGTAGCCCCAACAAGGCTCTTTCGTCTAATTACTTCCTGAACATCATT
ATTGTCATCTCTGTTCTTGCAGTTTTGACATATCTTTTTGGGAACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA