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Entry information : LuRboh96(Lus10017850|PACid:23148819)
Entry ID 12208
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuRboh96(Lus10017850|PACid:23148819)
Name LuRboh96(Lus10017850|PACid:23148819)
Class Respiratory burst oxidase homolog     [Orthogroup: Rboh003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuRboh96
start..stop		 S start..stop
LuRboh216 1421 0 35..845 17..781
ToriRboh11 977 0 66..845 86..799
DdruRboh09 969 0 40..845 60..809
PandeRboh08 962 0 66..845 91..804
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 319205..319553 347 N° 2 318899..319109 209 N° 3 318649..318811 161 N° 4 318177..318572 394
N° 5 317421..317807 385 N° 6 317232..317327 94 N° 7 316922..317140 217 N° 8 316675..316836 160
N° 9 316337..316600 262 N° 10 315954..316244 289  
complement(join(315954..316244,316337..316600,316675..316836,316922..317140,3172 32..317327,317421..317807,318177..318572,318649..318811,318899..319109,319205..3 19553))


exon

Literature and cross-references LuRboh96(Lus10017850|PACid:23148819)
DNA ref. Phytozome 12:   scaffold35 (319553..315954)
Protein sequence: LuRboh96(Lus10017850|PACid:23148819)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   845 (307)
PWM (Da):   %s   95301.31 (32315.1) Transmb domain:   %s   o290-309i374-393o424-446i471-493o503-520i790-812o
PI (pH):   %s   9.26 (5.56) Peptide Signal:   %s   cut: 22 range:22-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAGHSINAPAARASVSTSSLSSSSSSSSSSSSSIQMQHQHCSYLLDNGRLEGGQPSPNSIRFIDIGWEEVENRFNRLVIVREGSQPTVKGADFGYCVGIKDDPFMIVAGSDMINCRLQQ
CPEFAGQLLRALRGKRSSSSRRRIIKTDEEDSNYGSGITIRELYSHWHRLTSSSFSFQSSSNLVFDICDRDMDGKINQADIKQGILLSASTNRLCVTHEEAQEHAASIMEVLDSTRCGYI
EPNELEALLRTTLPGSNNNSSSAKLVVNDNNQEVSKTKAEMVFRAYWRRSWILLLWLIICFSLFTWKFIQYKHRMAFQVMGYCLSTAKGAAETLKFNMALILLPVCRNTITWIRRSTRIN
SVVPFNDNINFHKIVGGGIVIGVILHGGTHLACDFPRISGSDKATFRQTIAADFAYHQPSYVEILATTEVATGIAMVLLMAVAFALATSWPRRQSASLPKSVRKITGYNTFWYSHHLLIL
VYALLIVHSMFLFLTNNLFEKTTWMYIAFPVILYGGERVWRAIRSDSYNVQVLEASMFPGKVLHLKLQKPQGFKYKSGMYIFIQCPQISKLQWHPFSLTSGPKDEHLSVHMRALGDWSYE
VYGLFQEVILSGRKEFPQIYIDGGYGAPSQDHVKYDVVLMIGLGIGATPFISILKDIRSQQDGSEENRRGKGPLRAYFYWVTREQSSFDWFRDSLRDITTSNQNMVSVIEVNNFLTTAHE
EGDARSALITAAQALHRAKTGLDMLSRYQEARTHFGRPNWFSIFSKLATRHKRERIGKNINRKEPIKFQYCSAPTVCFSYTIAMLCVGAGVFYCGPSALGKELEELCTKFSTKTPTRFVF
HKEHY*

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCTGGTCATAGTATTAATGCACCAGCTGCAAGGGCTTCTGTTTCAACATCATCTTTATCCTCTTCAAGTTCTTCTTCCTCTTCCTCCTCTAGTTCAATACAGATGCAGCATCAA
CATTGCAGTTACTTGCTGGATAATGGTCGTTTAGAAGGAGGCCAGCCATCTCCCAATTCAATAAGGTTCATAGACATTGGTTGGGAGGAGGTGGAGAACCGGTTCAACCGGCTGGTTATT
GTCAGGGAAGGGTCTCAACCAACGGTCAAAGGGGCTGATTTTGGCTACTGTGTAGGTATAAAGGATGACCCTTTTATGATTGTTGCAGGTTCTGACATGATCAACTGCAGTAAAACATTG
AATAGGCATATAAAAGTCTGTGTTCTGTGCATTTTGATTTTGTGGTGAAAGCTCTAGTTGTGATTTTTGGTTCTTCTACTGCAGGGGGCTGCAACAGTGTCCTGAGTTTGCAGGTCAGCT
TTTGAGGGCATTAAGAGGGAAAAGAAGCAGCAGCAGCAGAAGAAGAATAATAAAAACAGATGAAGAAGATTCCAACTATGGTAGTGGAATCACAATAAGAGAACTTTATAGCCATTGGCA
TCGGCTGACTTCTTCTAGTTTCAGTTTCCAATCAAGCTCCAACCTTGTATTTGACATGTATATAATGCTTAACTTACCCTTGAGATTAGAGACAGTTAGTAACTTTTTCTTAACTGAAGC
TTTCAATTGATGTTACACACTCAGATATGTGACAGAGATATGGATGGAAAGATTAACCAGGCGGACATTAAGCAAGGAATATTGCTAAGTGCTTCAACGAATAGACTGTGTGTAACACAT
GAGGAAGCACAAGAACATGCTGCTTCAATCATGGAGGTTCTAGATTCAACAAGATGTGGCTACATTGAGGTATACCAACATCTGATAAAATCTTCCTTCAAGTATACAACATCACTTCAG
GATTTAACTTCAGCCCTATTGTTAGCCCCTAATGAACTAGAAGCACTACTCAGAACAACCTTGCCAGGAAGCAACAACAACAGCAGCAGTGCAAAACTTGTTGTCAATGACAACAACCAA
GAAGTGTCGAAAACCAAGGCGGAAATGGTGTTTAGGGCTTATTGGAGGAGATCATGGATATTGTTGCTGTGGTTGATCATCTGCTTCTCACTATTCACATGGAAGTTCATTCAGTACAAG
CACAGAATGGCATTTCAGGTAATGGGGTATTGCCTTTCCACTGCCAAAGGTGCAGCTGAGACACTCAAATTCAACATGGCTTTGATTCTCCTCCCCGTTTGCCGAAACACCATCACTTGG
ATTAGGAGAAGCACAAGGATCAACTCTGTTGTTCCATTCAATGACAACATCAACTTCCACAAGGTAAGCATTTAAGGGGTCGTTTGGATGAGTTATTTTGCATGTGTGTGTGTGGTGTTT
GGAGCAAAATGATGCATTATTATTTGAGAATGTGAGAGATTTATGAGATGCAAAGGGGTTATGGTGCGGGAATTATCATGTTTAGCTAATGAGTCAATTCAATGTGGTATTTGCTAAACG
GAAAGGCCAAAGTACTCGAAATACCGTGTGTGGGGGGAGGTATATTTTTGTTCGATGTCAAATGAGTTATTTTGATCCAAATAACTCACCCAAACGACCCGTAAAGGTGTCAAACGCGCT
ACTTAGGTATAAATTTAGGGTTGGTTACCCTTTGAGTGACTCAATAATATCTTGTTGGTGTGTGTTCATCAGATATAGTTGGTGGAGGAATAGTGATTGGAGTAATACTACATGGTGGAA
CACATCTTGCTTGTGACTTCCCAAGAATAAGTGGCTCAGACAAGGCAACTTTCAGGCAAACCATAGCAGCCGATTTTGCTTATCACCAACCTTCATATGTCGAGATATTGGCCACCACAG
AGGTTGCAACTGGGATTGCAATGGTATTACTAATGGCGGTTGCATTCGCTCTGGCGACAAGCTGGCCTCGTCGCCAGTCAGCTTCGCTTCCGAAGTCTGTCAGAAAAATAACTGGTTACA
ACACATTTTGGTACTCTCACCATTTGCTCATACTTGTCTATGCTCTCCTCATTGTTCACTCCATGTTCCTCTTCCTCACCAACAATCTCTTTGAGAAGACCGTGAGTTCTTTGTTTCTCT
ATTCCTTCTTTGTGCCTTAATGTGTAAAGAGGGTAGTGCTAATAAACTGCAAAAAGGTTTGATCTTTGTTGCAGACACATGGATGTACATTGCCTTCCCAGTGATCCTATATGGTGGCGA
ACGCGTATGGAGAGCCATTAGATCAGATTCTTATAATGTACAAGTTCTGGAAGTAAGTACATAAATCTGAATGGTGGATGATAGCCTGTGGGATGAGATTCCAAAACATTGGACTGATTT
TTTTATGCCTTTGTGCAATGCAGGCGCAAGCATGTTCCCTGGAAAGGTTTTGCATCTGAAGCTGCAGAAACCTCAAGGTTTCAAGTACAAGAGTGGGATGTACATCTTCATACAGTGCCC
TCAGATTTCTAAGCTTCAGTGGCACCCATTTTCATTAACTTCAGGGCCTAAAGATGAGCACTTGAGTGTCCACATGAGAGCTCTTGGTGATTGGAGCTATGAAGTATATGGTCTCTTCCA
AGAGGTGATAAATTGAACAAAGTTAACAAAACAGCAGAATTAATTAAAAAATTAAGCTCAACCTGGGTTTTTTCCCCCACCATTGTTAGGTGTAATACTATCTGGAAGGAAGGAGTTTCC
ACAGATATACATAGATGGAGGATATGGAGCTCCATCTCAAGACCATGTTAAGTATGATGTTGTCCTGATGATTGGTCTTGGCATTGGAGCTACACCCTTTATTAGTATCCTCAAAGACAT
AAGATCTCAGCAGGTGCGTAAGATTATCAGCCTTTATCTTTCTGTATAAAATTTGAGCTTTCTTGAACACTGAACCATGAAAAGCAGGAGATGGCAGTGAAGAAAACAGAAGGGGAAAGG
GTCCTTTAAGAGCCTACTTCTACTGGGTGACAAGGGAGCAAAGTTCATTTGATTGGTTCAGAGACAGTCTGAGGGACATAACCACGTCAAATCAAAACATGGTTAGTGTGATTGAGGTGA
ACAACTTCTTGACAACAGCACATGAAGAAGGAGATGCAAGGTCAGCTCTGATCACTGCAGCACAAGCACTGCATCGTGCCAAGACCGGCCTCGACATGTTGTCCCGGTATCAGGTAAAAC
ACTGGTGCGACGGTTCAGATTGGTTCCTATATTATTCATTAACATCAAAGTCTGATAGTCTTGAACCCGAAATGGGGAGTTTCAGGAGAGGCTAGGACGCATTTTGGTCGACCTAACTGG
TTCAGCATCTTCTCAAAGCTTGCTACAAGACACAAACGAGAGAGGATTGGTAAGAACATTAACAGAAAGGAACCGATTAAGTTTCAGTACTGCAGTGCACCGACTGTATGTTTTTCATAT
ACAATTGCGATGCTTTGTGTGGGCGCAGGAGTGTTCTACTGTGGACCGTCAGCGCTAGGAAAAGAGTTAGAGGAGCTATGTACTAAATTCTCAACCAAAACACCCACTCGATTTGTTTTC
CACAAGGAACATTACTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCTGGTCATAGTATTAATGCACCAGCTGCAAGGGCTTCTGTTTCAACATCATCTTTATCCTCTTCAAGTTCTTCTTCCTCTTCCTCCTCTAGTTCAATACAGATGCAGCATCAA
CATTGCAGTTACTTGCTGGATAATGGTCGTTTAGAAGGAGGCCAGCCATCTCCCAATTCAATAAGGTTCATAGACATTGGTTGGGAGGAGGTGGAGAACCGGTTCAACCGGCTGGTTATT
GTCAGGGAAGGGTCTCAACCAACGGTCAAAGGGGCTGATTTTGGCTACTGTGTAGGTATAAAGGATGACCCTTTTATGATTGTTGCAGGTTCTGACATGATCAACTGCAGGCTGCAACAG
TGTCCTGAGTTTGCAGGTCAGCTTTTGAGGGCATTAAGAGGGAAAAGAAGCAGCAGCAGCAGAAGAAGAATAATAAAAACAGATGAAGAAGATTCCAACTATGGTAGTGGAATCACAATA
AGAGAACTTTATAGCCATTGGCATCGGCTGACTTCTTCTAGTTTCAGTTTCCAATCAAGCTCCAACCTTGTATTTGACATATGTGACAGAGATATGGATGGAAAGATTAACCAGGCGGAC
ATTAAGCAAGGAATATTGCTAAGTGCTTCAACGAATAGACTGTGTGTAACACATGAGGAAGCACAAGAACATGCTGCTTCAATCATGGAGGTTCTAGATTCAACAAGATGTGGCTACATT
GAGCCTAATGAACTAGAAGCACTACTCAGAACAACCTTGCCAGGAAGCAACAACAACAGCAGCAGTGCAAAACTTGTTGTCAATGACAACAACCAAGAAGTGTCGAAAACCAAGGCGGAA
ATGGTGTTTAGGGCTTATTGGAGGAGATCATGGATATTGTTGCTGTGGTTGATCATCTGCTTCTCACTATTCACATGGAAGTTCATTCAGTACAAGCACAGAATGGCATTTCAGGTAATG
GGGTATTGCCTTTCCACTGCCAAAGGTGCAGCTGAGACACTCAAATTCAACATGGCTTTGATTCTCCTCCCCGTTTGCCGAAACACCATCACTTGGATTAGGAGAAGCACAAGGATCAAC
TCTGTTGTTCCATTCAATGACAACATCAACTTCCACAAGATAGTTGGTGGAGGAATAGTGATTGGAGTAATACTACATGGTGGAACACATCTTGCTTGTGACTTCCCAAGAATAAGTGGC
TCAGACAAGGCAACTTTCAGGCAAACCATAGCAGCCGATTTTGCTTATCACCAACCTTCATATGTCGAGATATTGGCCACCACAGAGGTTGCAACTGGGATTGCAATGGTATTACTAATG
GCGGTTGCATTCGCTCTGGCGACAAGCTGGCCTCGTCGCCAGTCAGCTTCGCTTCCGAAGTCTGTCAGAAAAATAACTGGTTACAACACATTTTGGTACTCTCACCATTTGCTCATACTT
GTCTATGCTCTCCTCATTGTTCACTCCATGTTCCTCTTCCTCACCAACAATCTCTTTGAGAAGACCACATGGATGTACATTGCCTTCCCAGTGATCCTATATGGTGGCGAACGCGTATGG
AGAGCCATTAGATCAGATTCTTATAATGTACAAGTTCTGGAAGCAAGCATGTTCCCTGGAAAGGTTTTGCATCTGAAGCTGCAGAAACCTCAAGGTTTCAAGTACAAGAGTGGGATGTAC
ATCTTCATACAGTGCCCTCAGATTTCTAAGCTTCAGTGGCACCCATTTTCATTAACTTCAGGGCCTAAAGATGAGCACTTGAGTGTCCACATGAGAGCTCTTGGTGATTGGAGCTATGAA
GTATATGGTCTCTTCCAAGAGGTAATACTATCTGGAAGGAAGGAGTTTCCACAGATATACATAGATGGAGGATATGGAGCTCCATCTCAAGACCATGTTAAGTATGATGTTGTCCTGATG
ATTGGTCTTGGCATTGGAGCTACACCCTTTATTAGTATCCTCAAAGACATAAGATCTCAGCAGGATGGCAGTGAAGAAAACAGAAGGGGAAAGGGTCCTTTAAGAGCCTACTTCTACTGG
GTGACAAGGGAGCAAAGTTCATTTGATTGGTTCAGAGACAGTCTGAGGGACATAACCACGTCAAATCAAAACATGGTTAGTGTGATTGAGGTGAACAACTTCTTGACAACAGCACATGAA
GAAGGAGATGCAAGGTCAGCTCTGATCACTGCAGCACAAGCACTGCATCGTGCCAAGACCGGCCTCGACATGTTGTCCCGGTATCAGGAGGCTAGGACGCATTTTGGTCGACCTAACTGG
TTCAGCATCTTCTCAAAGCTTGCTACAAGACACAAACGAGAGAGGATTGGTAAGAACATTAACAGAAAGGAACCGATTAAGTTTCAGTACTGCAGTGCACCGACTGTATGTTTTTCATAT
ACAATTGCGATGCTTTGTGTGGGCGCAGGAGTGTTCTACTGTGGACCGTCAGCGCTAGGAAAAGAGTTAGAGGAGCTATGTACTAAATTCTCAACCAAAACACCCACTCGATTTGTTTTC
CACAAGGAACATTACTAG

Retrieve as FASTA