Entry information : LuRboh216
Entry ID 12225
Creation 2013-05-29 (Qiang LI)
Last sequence changes 2013-05-30 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang Li)
Peroxidase information: LuRboh216
Name LuRboh216
Class Respiratory burst oxidase homolog     [Orthogroup: Rboh003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuRboh216
start..stop
S start..stop
LuRboh96 1422 0 17..781 35..845
ToriRboh11 946 0 48..781 86..799
DdruRboh09 932 0 26..781 62..809
PandeRboh08 930 0 48..781 91..804
Gene structure Fichier Exons


exon

Literature and cross-references LuRboh216
DNA ref. Phytozome 12:   scaffold9 (1409242..1413738)
Protein sequence: LuRboh216
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   781 (307)
PWM (Da):   %s   88705.89 (32315.1) Transmb domain:   %s   o243-262i326-345o380-402i423-445o
PI (pH):   %s   8.93 (5.56) Peptide Signal:   %s   cut: 22 range:22-328
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
SSLSSSNSSSSSSSSSMQMQHHYCSHLLDNGPLEGGHPPPNAIRF
VEIGWEEVENRFNRLVIVRGESQPSVKGADFGYCVGIKDDPFMFVAGSDMINL
WLLQCPEFAGQLLRALRGRRSSSRRRRRIKTDEEDSNYGSGITIRELYSHWHRLTSPSFSFQSSSNLLFDICDRDMDGKINQADITQGILLSASTNRLCVTHEEAQEHAASIMEVLDSTR
CGYI
QEVSKSKAEIVFRAYWRRSWILLMWLIICFSLFTWKFIQYKHRMAFEVMGYCLSTAKGAAETLKFNMALILLPICRNTITWIRRSTRINSVIPFNDNINFHKIVGGGIVIGVILHG
GTHLACDFPRISGSDKATFRQTIAADFAYHQPSYVEILATTEVATGIAMVLLMAVAFTLATSWPRRQSALLPKSVRQVTGYNTFWYSHHLLILVYALLIVHSMFLFLTNNLFEKT
TWMYI
VFPVILYGGERVWRAIRSDSYNVQVLE
ASMFHGKVLHLKLQKPQGFKYKSGMYMFIQCPQISKLQWHPFSLTSGPKDDHLSVHMRALGDWSYEVYGLFQEAILSGRKEFPKIYIDGGYGA
PSQDHVKYDVVLMIGLGIGATPFISILKDIRSQQ
DGSEETRRGKGPLRAYFYWVTREQSSFDWFRDSLRNISTSNQNMVSVIEVNNFLTTAHEEGDARSALISAAQALYRAKTGLDMLSR
YQ
EARTHFGRPNWFSIFSTLAIRHEHERIGKNINRKEPIAMFCVGAGVFYCGPPALGKELEELCTNFSTKTPTRFVFHKEHY

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction. 5' end is missing. PS is missing.
DNA
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CDS
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