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Entry information : SpolKat02 ( Spipo17G0032400)
Entry ID 13254
Creation 2015-06-19 (Christophe Dunand)
Last sequence changes 2015-06-19 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-24 (Catherine Mathe)
Peroxidase information: SpolKat02 ( Spipo17G0032400)
Name (synonym) SpolKat02 ( Spipo17G0032400)
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpolKat02
start..stop		 S start..stop
GhKat01 824 0 1..420 1..420
VvKat02 819 0 1..420 1..420
ZaKat01 818 0 1..423 1..423
LuKat 817 0 1..420 1..420
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13254' 'complement(join(2400009..2400116,2400209..2400985,2401522..2401799,2402830..2402926,2403345..2403359))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2403345..2403359 13 N° 2 2402830..2402926 95 N° 3 2401522..2401799 276 N° 4 2400209..2400985 775
N° 5 2400009..2400116 106  
complement(join(2400009..2400116,2400209..2400985,2401522..2401799,2402830..2402 926,2403345..2403359))


exon

Literature and cross-references SpolKat02 ( Spipo17G0032400)
DNA ref. Phytozome 12:   pseudo17 (2403359..2400009)
Cluster/Prediction ref. Phytozome Gene 12:   31514501
Protein sequence: SpolKat02 ( Spipo17G0032400)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   424
PWM (Da):   %s   48632.13 Transmb domain:   %s   i7-25o
PI (pH):   %s   6.65
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDPYRHRPSSANNSSFWTTNSGAPVWNNDSSLTVGPRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPR
GFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFLFDDLGIPADYRHMEGSGVNTYTLISKEGKALYVKFHWKPTCGVKCLLDDEA
VSVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDRFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFFSENEQLAFCPAIVVPGIHYSDDKLLQTRVFSYADTQRHRLGPNY
LMLPPNAPKCAHHNNHHEGSMNFMHRDEEVNYFPSRYDPVRHAEQFPIPPRVLTGRREKVGFQL*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACCCCTACAGGGTGATCTCCTCTCCCTCTCTCGTTCCTGGTGATGTCTGTTGCTCACGTTATGTTTTGCCGCTCGTGGAATTCTAGGTCGAGTGTTTTGCTTTTTGATCTTCCGCA
AGTTATCTATCCCTTCCGGGGAGGGATGATATAGGATCAATCCCTTCGTCGCATCGATTAGGCCATTTCTCTTTCCGGTCTTGTTCTCTCGGGGATAGTTAATCCCGCTGAAATAGTTTT
TCTTCCGGATCAGATTTTGGGGGATTATTTAGCCGTTGTTGAAGATATTTTTACTTCGTCCGTTGTGTAATTCGAGTATTACTCAACATTGTTTCATCTCGCCGATTGAGATGCTTCTAT
TTGTTCTACGGGTGGTTCGTGTTACTACTACTTATTTTCCTCACCATTATTTGTTAACGTTGGTTTGTTGCAGCACACCGTCCTTCGAGCGCCAACAACTCTTCCTTCTGGACGACCAAT
TCCGGGGCGCCCGTTTGGAACAACGACTCCTCCCTCACTGTCGGCCCTCGGGGTACTGTCTCATCTCTTACTGCTCTGTAGTCGTCAATTTTTTCTCGTCTCCCTTTTAATCTACTCCAT
GGAGGCCAGCTCGTGCATGGGCCCTCGGGTGTTTCGAGTTGATTTTTTTTGGTCTCCCACTCATCGTCGTCTTTTTCTCATTCGGTTGGCTTCAACCTTTTTTTTCCGTCTTCTTTTGGA
CTAACTTGCCTCTGTTGATTGATCTTTACTGCAAATGGACTTTTTTTTTATGCCCACATTGTAAGAAAAATCAAGGCCGTTCCTTTTGATTATGTGCCCTTATTGATATGCATACTAACG
GTAAAATGTGCTATGTATATATAAAAAAAAACCGGACTAGAAATAATTATCCCCAAGGAAATTAGTGCTTAGGCATGCAGCTTGAAAAATATTCCTGGCTTATGCAATACCTTTAAGGCC
TCTGTGGTATCCGTCTATCTGATTCAATAATCCCCGTTATTTTTTTTAATTTTCTTTTTAAGGAAATAGTGGCAATGTGACTTTTCAATCGGATATGATAGAATAAGACATCTCAGTTTG
GAACTATTGACCGGTCTCTGGAAGTAGACCTAACACCATCTATTTTGTTTCCTTGGGTTCTTTCACTACTATCCTTTACCTTGATTGGATATCGATGTTAGAAGAGTTTCATTTGCCATC
TGTTAGGTCCTCAAAGAAGCTAAATAACAAGTTTTCACTGAATTTCACGAGAAAACTATTCTTCTAGTTCACTTTCGTTTGTGCTTCTTTTGGTGCATCTCTAAAATTTTATATTCGGAT
CCATATTTTCTTTTTTATTGAGTGGAAAACTTAGTATATACCTCTCTTGTGACTTATAGAAAGTCTGATCCTTTGTTGCTTGAAAATGAGTTTGCTTTGGTAAATATAACATTTTTTCCG
TTTTATTATGACATTTATTTAGGAAATGATTACTTTCGTCGTCTTGATTATATGCAATAAAGCTGTTTTCCTTGCCTAGGAATGTTCCGAAGGGTAATTATTCAGTCCATTTTGATGGTC
AGGAGACCAATACTGCTGGAGGATTACCATCTCATCGAGAAACTTGCGCAGTTTGATAGGGAACGCATCCCTGAACGCGTCGTCCATGCTAGGGGAGCGAGTGCCAAGGGTTTCTTTGAG
GTCACTCATGATATTTCTCATCTCACCTGTGCTGACTTTTTGCGGGCACCGGGAGTCCAGACCCCTGTGATTGTCCGTTTCTCAACTGTTATTCACGAGAGGGGAAGCCCCGAGACTCTA
AGAGACCCTAGGGGTTTTGCTGTCAAGTTCTACACTAGAGAGGTATTGAGGACCTTCTTCTTCTTCCTCTTCTTCCTCTTCTTCTACACTAAAGATGGCTCCATAGGGATTAATAGGAGA
TGTTTAATGAGAAAATCAGTAACTGATTCAATGGATGAAGCCAGTGCTTGTCCTGAGTAATATCCCATGGATATTACTTAGGATGAAATGAGCTCCATCGTTGACCTTCCCGTCGCCACT
CATGTTATCTTGAATGCTAAGCTAATGAGGCACCCCTGTCTCATCTGGCTAGATTATTAGAAACCTAGCCTTCCAGCTTCATAATGTTCTATCTGTTTTTTGTTTCAGAATCATGCTGAG
AATATTTTGAAATCAGTTTCCGATTAGACTGCAGTCCGAAAAACCTTCAGCTTAAAAGAAACAAAATGATGGAAATTTAGATTATTGTACAATATAAGCACAATAATCTAAATTTCCATC
TGATAATGCATGCTCTCACACGCAGGATGCCACTCTGAAGTGGCACGAGTTGTGCTTCGAGCTCGCGGATCTTAATGGTGCTTTTCTCTTGTTCTCAGGGGGGAATTTTGATCTGGTGGG
GAATAATTTCCCGGTATTCTTCATCCGGGATGGGATGAAGTTCCCTGACATGGTCCACGCCCTCAAGCCCAACCCCAAGTCGCACATCCAAGAGAACTGGAGGATCCTCGACTTCTTCTC
CCACCACCCGGAGAGCCTGCACATGTTCACCTTCCTCTTCGACGACCTCGGCATCCCCGCTGACTACAGGCACATGGAAGGCTCCGGGGTCAACACCTACACTCTAATCAGCAAGGAAGG
GAAGGCTCTCTATGTGAAGTTCCACTGGAAGCCCACCTGCGGCGTGAAGTGCCTGCTGGACGACGAGGCGGTCTCGGTCGGCGGCAGCAACCACAGCCACGCCACCCAGGACCTCTATGA
CTCCATCGCCGCGGGCAACTACCCTGAATGGAAGCTCTACATCCAGACGATAGACCCCGACCACGAGGACCGGTTTGACTTCGACCCACTCGACGTCACCAAGACCTGGCCCGAGGACAT
CCTGCCGCTGCAGCCGGTCGGCCGCCTGGTGCTGAACAAGAACATCGACAACTTCTTCTCTGAGAACGAGCAGCTCGCCTTCTGCCCGGCCATCGTCGTGCCGGGGATCCACTACTCGGA
CGACAAGCTGCTCCAGACCAGGGTCTTCTCCTACGCCGACACCCAGCGGCACCGCCTCGGGCCGAACTACTTGATGCTCCCGCCAAACGCCCCCAAGTGCGCCCACCACAACAACCACCA
CGAGGGGTCGATGAATTTCATGCACAGGGACGAGGAGGTAATATTTCTGCGTTCTGTCCACATGTTTTTTTGTCAAGATCAGTCGTCCCATGCTGGTTATTATTTTTCTGACCATGCTGT
GCTACTCAGGTGTGAATTACTTCCCTTCGAGGTACGACCCGGTGCGTCACGCCGAGCAGTTCCCCATTCCGCCCCGGGTTCTCACGGGGAGGCGCGAGAAGGTGGGTTTTCAGCTGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACCCCTACAGGCACCGTCCTTCGAGCGCCAACAACTCTTCCTTCTGGACGACCAATTCCGGGGCGCCCGTTTGGAACAACGACTCCTCCCTCACTGTCGGCCCTCGGGGACCAATA
CTGCTGGAGGATTACCATCTCATCGAGAAACTTGCGCAGTTTGATAGGGAACGCATCCCTGAACGCGTCGTCCATGCTAGGGGAGCGAGTGCCAAGGGTTTCTTTGAGGTCACTCATGAT
ATTTCTCATCTCACCTGTGCTGACTTTTTGCGGGCACCGGGAGTCCAGACCCCTGTGATTGTCCGTTTCTCAACTGTTATTCACGAGAGGGGAAGCCCCGAGACTCTAAGAGACCCTAGG
GGTTTTGCTGTCAAGTTCTACACTAGAGAGGGGAATTTTGATCTGGTGGGGAATAATTTCCCGGTATTCTTCATCCGGGATGGGATGAAGTTCCCTGACATGGTCCACGCCCTCAAGCCC
AACCCCAAGTCGCACATCCAAGAGAACTGGAGGATCCTCGACTTCTTCTCCCACCACCCGGAGAGCCTGCACATGTTCACCTTCCTCTTCGACGACCTCGGCATCCCCGCTGACTACAGG
CACATGGAAGGCTCCGGGGTCAACACCTACACTCTAATCAGCAAGGAAGGGAAGGCTCTCTATGTGAAGTTCCACTGGAAGCCCACCTGCGGCGTGAAGTGCCTGCTGGACGACGAGGCG
GTCTCGGTCGGCGGCAGCAACCACAGCCACGCCACCCAGGACCTCTATGACTCCATCGCCGCGGGCAACTACCCTGAATGGAAGCTCTACATCCAGACGATAGACCCCGACCACGAGGAC
CGGTTTGACTTCGACCCACTCGACGTCACCAAGACCTGGCCCGAGGACATCCTGCCGCTGCAGCCGGTCGGCCGCCTGGTGCTGAACAAGAACATCGACAACTTCTTCTCTGAGAACGAG
CAGCTCGCCTTCTGCCCGGCCATCGTCGTGCCGGGGATCCACTACTCGGACGACAAGCTGCTCCAGACCAGGGTCTTCTCCTACGCCGACACCCAGCGGCACCGCCTCGGGCCGAACTAC
TTGATGCTCCCGCCAAACGCCCCCAAGTGCGCCCACCACAACAACCACCACGAGGGGTCGATGAATTTCATGCACAGGGACGAGGAGGTGAATTACTTCCCTTCGAGGTACGACCCGGTG
CGTCACGCCGAGCAGTTCCCCATTCCGCCCCGGGTTCTCACGGGGAGGCGCGAGAAGGTGGGTTTTCAGCTGTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACCCCT ACAGGCACCG TCCTTCGAGC GCCAACAACT CTTCCTTCTG GACGACCAAT TCCGGGGCGC CCGTTTGGAA CAACGACTCC TCCCTCACTG TCGGCCCTCG GGGACCAATA  CTGCTGGAGG ATTACCATCT CATCGAGAAA CTTGCGCAGT TTGATAGGGA ACGCATCCCT GAACGCGTCG TCCATGCTAG GGGAGCGAGT GCCAAGGGTT TCTTTGAGGT CACTCATGAT  ATTTCTCATC TCACCTGTGC TGACTTTTTG CGGGCACCGG GAGTCCAGAC CCCTGTGATT GTCCGTTTCT CAACTGTTAT TCACGAGAGG GGAAGCCCCG AGACTCTAAG AGACCCTAGG  GGTTTTGCTG TCAAGTTCTA CACTAGAGAG GGGAATTTTG ATCTGGTGGG GAATAATTTC CCGGTATTCT TCATCCGGGA TGGGATGAAG TTCCCTGACA TGGTCCACGC CCTCAAGCCC  AACCCCAAGT CGCACATCCA AGAGAACTGG AGGATCCTCG ACTTCTTCTC CCACCACCCG GAGAGCCTGC ACATGTTCAC CTTCCTCTTC GACGACCTCG GCATCCCCGC TGACTACAGG  CACATGGAAG GCTCCGGGGT CAACACCTAC ACTCTAATCA GCAAGGAAGG GAAGGCTCTC TATGTGAAGT TCCACTGGAA GCCCACCTGC GGCGTGAAGT GCCTGCTGGA CGACGAGGCG  GTCTCGGTCG GCGGCAGCAA CCACAGCCAC GCCACCCAGG ACCTCTATGA CTCCATCGCC GCGGGCAACT ACCCTGAATG GAAGCTCTAC ATCCAGACGA TAGACCCCGA CCACGAGGAC  CGGTTTGACT TCGACCCACT CGACGTCACC AAGACCTGGC CCGAGGACAT CCTGCCGCTG CAGCCGGTCG GCCGCCTGGT GCTGAACAAG AACATCGACA ACTTCTTCTC TGAGAACGAG  CAGCTCGCCT TCTGCCCGGC CATCGTCGTG CCGGGGATCC ACTACTCGGA CGACAAGCTG CTCCAGACCA GGGTCTTCTC CTACGCCGAC ACCCAGCGGC ACCGCCTCGG GCCGAACTAC  TTGATGCTCC CGCCAAACGC CCCCAAGTGC GCCCACCACA ACAACCACCA CGAGGGGTCG ATGAATTTCA TGCACAGGGA CGAGGAGGTG AATTACTTCC CTTCGAGGTA CGACCCGGTG 
CGTCACGCCG AGCAGTTCCC CATTCCGCCC CGGGTTCTCA CGGGGAGGCG CGAGAAGGTG GGTTTTCAGC TGTAA 

Retrieve as FASTA