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Entry information : AtrPrx68(AmTr_v1.0_scaffold00029.225 / AmTr_v1.0_scaffold00029.226)
Entry ID 16653
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx68(AmTr_v1.0_scaffold00029.225 / AmTr_v1.0_scaffold00029.226)
Name AtrPrx68(AmTr_v1.0_scaffold00029.225 / AmTr_v1.0_scaffold00029.226)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx68
start..stop		 S start..stop
AtrPrx30 504 0 1..323 1..323
AtrPrx28 494 1.27e-177 1..323 1..320
AtrPrx45 494 2.15e-177 1..323 1..320
AtrPrx60 487 1.1e-174 1..323 1..320
Literature and cross-references AtrPrx68(AmTr_v1.0_scaffold00029.225 / AmTr_v1.0_scaffold00029.226)
Protein sequence: AtrPrx68(AmTr_v1.0_scaffold00029.225 / AmTr_v1.0_scaffold00029.226)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   361 (332)
PWM (Da):   %s   38671.19 (35718.8) Transmb domain:   %s   o5-27i341-360o
PI (pH):   %s   6.38 (6.50) Peptide Signal:   %s   cut: 30 range:30-361
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSCSTAHIA TLLMIVLCSS SSMLLLCEGQ QLSTNFYDSS CPDALSTIPT AILTAISEET RMGASLINLH FKDCFVNGGD ASVLLDSTSS FESEKDAIQK IGSARGFEVI ENAKSKVESI  CLGVVSCADI LAVAARDSSV AMGGPSWEVK LGRRDSATAR KRDGEIELPV VTASLHVLLF LFGRKGLIAK DMVALSGAHT IGQAQCFNFR NRIYNHPNIN AGIASIRRPH CPLNGNNSAL  SPLDLDTPDS FDNSYFHNLR QKQGLLESDQ VLFNGGSTDG IVLFYSNSQS AFYSDFAVAM VKMGDIEPLT GTAGQIRARC SVPQRAGASG TNNASNGKFN WYWILCLCLF SSIYSLYSIH 
S 

Retrieve as FASTA  
Remarks ncorrect prediction from Phytozome (two independant predictions: scaffold00029.225 (5' end) and scaffold00029.226 (3' end))
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCTCTT GCTCTACTGC CCATATAGCA ACATTGCTGA TGATAGTGCT ATGTAGTAGT AGCAGCATGC TGTTACTATG TGAAGGGCAA CAGCTGAGCA CCAACTTCTA TGATTCGAGC  TGCCCCGATG CGCTCTCCAC CATCCCCACC GCCATTCTCA CCGCGATATC AGAGGAGACG CGCATGGGAG CCTCCCTTAT TAACCTCCAC TTCAAAGACT GCTTTGTCAA TGTGAGCTCT  CGCTCTTCCA GTTTATAAAT GTATTATATC TTTCTATCTA TTTATCTATT CATCTATTCA TCTATGAGTC TAATTTCTTT CTATTTATTG AACTCTATCT GGCTTGCGCG TGTTGGTGAT  CTTAGATGAC TGGATATCTA TGTGCAGGGG GGCGATGCAT CGGTGCTCTT GGACTCGACT TCCTCTTTTG AAAGCGAGAA GGATGCCATT CAGAAAATTG GCTCTGCAAG AGGCTTCGAA  GTTATTGAAA ACGCAAAGTC GAAAGTGGAA AGCATATGTC TAGGCGTGGT CTCCTGTGCC GACATCCTCG CAGTTGCAGC TAGAGACTCT TCTGTAGCAG TAAGCATATC AAAGCGACCG  GTTCCTTTAG CAACAGTTTT CTCTTAAAAT CTTTTATAGT CCTTCAAATA TTATGGTCCT TCAAAATAAT ATTTCAAGAG TCGCACAGCT TTGTTTTCTT TTTTTGTGTG TTTGCATAGT  TCATGAGTAT TATTTTTTGG TTGTTTGGTA ATTCAGTAGG GGGAGAGAGG CCCTACCCAT TTTTTTGGTA ATTCAGTGGT TTTTTGGGTA ATTCAGTAGG AGTTAACTTT TTGAATGTGT  TAGTAGGGTG GTGTTAGTGG CAAGAATGAA AACCACAATA TCGTGACTAT AGTGTGGGGG TGCTATCACC ACGATCTTAG CCCAAGGTGG TAACAGTTAA CCTTAGCTAT TAGCAGAAAA  ATTCGAAGCT GCAGGCGTTG TATTCACCAT GGTCAAAGTT CAAGCGAATT CTGTGATATT CAAGTTATCA AATTCCCCAT TTGACGGCTA TAATAAGCGT GGCATCATTG TATCTAATGT  ATCCCAATTC AAAAATAACA ATTTGTTAGT TTGTTTTCCA AATAACTATT TCTCCCCAAT TTAAACAAGT TCATGGCATG TCTTAAACCA AGCTTGGAGG TAAAAGATTC ATCTAAATTA  GGTCTTAAGG GGTCAAAACA ATCACCCTAA CATTGAAGCA TTTGGACCAA CTTGTAAGAT GTTCCAAGTT GTTCAGTTTT TTTCCTAACA ATTTTGACTC TTTTACCTAC AAGTATGATT  TCAACTCTAA ACATGTATCT CAACATTTTC GGATTTTCGC CTTCTATTTC TCAAACTGAA AACTGACATA AGCAAAAATT GATTGTGAAA TAATTCTCTC TACAGATGGG AGGCCCATCT  TGGGAAGTGA AGTTGGGGCG TAGAGACTCT GCAACCGCAA GAAAGAGAGA CGGAGAGATA GAACTCCCTG TCGTCACCGC TTCCTTGCAC GTTCTCCTCT TTCTCTTTGG CAGAAAGGGA  CTCATTGCCA AAGACATGGT GGCTCTCTCC GGTGCACATA CCATAGGCCA AGCCCAGTGC TTCAATTTCA GGAACAGAAT TTACAATCAC CCCAACATCA ATGCTGGAAT TGCTAGCATA  AGACGTCCGC ACTGCCCGTT AAATGGCAAC AACTCAGCCC TCTCACCTCT CGATCTTGAT ACTCCCGACA GCTTCGACAA CAGCTACTTC CATAATTTGA GGCAGAAACA GGGTTTGTTA  GAGTCAGATC AAGTGTTGTT TAATGGTGGA TCAACTGATG GCATAGTGTT GTTTTATAGT AACAGTCAAA GTGCCTTCTA CTCGGACTTT GCGGTGGCTA TGGTGAAGAT GGGGGACATT  GAGCCACTTA CTGGAACAGC TGGGCAGATC AGGGCTAGGT GCTCAGTGCC CCAACGGGCT GGTGCAAGTG GCACAAATAA TGCTAGCAAT GGGAAGTTCA ACTGGTATTG GATACTATGC 
TTGTGTTTGT TCAGCTCTAT CTATTCTTTA TATTCAATTC ATTCTTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCTCTT GCTCTACTGC CCATATAGCA ACATTGCTGA TGATAGTGCT ATGTAGTAGT AGCAGCATGC TGTTACTATG TGAAGGGCAA CAGCTGAGCA CCAACTTCTA TGATTCGAGC  TGCCCCGATG CGCTCTCCAC CATCCCCACC GCCATTCTCA CCGCGATATC AGAGGAGACG CGCATGGGAG CCTCCCTTAT TAACCTCCAC TTCAAAGACT GCTTTGTCAA TGGGGGCGAT  GCATCGGTGC TCTTGGACTC GACTTCCTCT TTTGAAAGCG AGAAGGATGC CATTCAGAAA ATTGGCTCTG CAAGAGGCTT CGAAGTTATT GAAAACGCAA AGTCGAAAGT GGAAAGCATA  TGTCTAGGCG TGGTCTCCTG TGCCGACATC CTCGCAGTTG CAGCTAGAGA CTCTTCTGTA GCAATGGGAG GCCCATCTTG GGAAGTGAAG TTGGGGCGTA GAGACTCTGC AACCGCAAGA  AAGAGAGACG GAGAGATAGA ACTCCCTGTC GTCACCGCTT CCTTGCACGT TCTCCTCTTT CTCTTTGGCA GAAAGGGACT CATTGCCAAA GACATGGTGG CTCTCTCCGG TGCACATACC  ATAGGCCAAG CCCAGTGCTT CAATTTCAGG AACAGAATTT ACAATCACCC CAACATCAAT GCTGGAATTG CTAGCATAAG ACGTCCGCAC TGCCCGTTAA ATGGCAACAA CTCAGCCCTC  TCACCTCTCG ATCTTGATAC TCCCGACAGC TTCGACAACA GCTACTTCCA TAATTTGAGG CAGAAACAGG GTTTGTTAGA GTCAGATCAA GTGTTGTTTA ATGGTGGATC AACTGATGGC  ATAGTGTTGT TTTATAGTAA CAGTCAAAGT GCCTTCTACT CGGACTTTGC GGTGGCTATG GTGAAGATGG GGGACATTGA GCCACTTACT GGAACAGCTG GGCAGATCAG GGCTAGGTGC  TCAGTGCCCC AACGGGCTGG TGCAAGTGGC ACAAATAATG CTAGCAATGG GAAGTTCAAC TGGTATTGGA TACTATGCTT GTGTTTGTTC AGCTCTATCT ATTCTTTATA TTCAATTCAT 
TCTTAA 

Retrieve as FASTA