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Entry information : EsilMSD03 (Esi_0342_0001)
Entry ID 16947
Creation 2021-01-30 (Christophe Dunand)
Last sequence changes 2021-01-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Peroxidase information: EsilMSD03 (Esi_0342_0001)
Name (synonym) EsilMSD03 (Esi_0342_0001)
Class Mn SOD    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Phaeophyceae Ectocarpaceae Ectocarpus
Organism Ectocarpus siliculosus    [TaxId: 2880 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value EsilMSD03
start..stop		 S start..stop
CbraMSD01 75 8.81e-17 14..168 76..232
NoffMSD01-1B 67 0.0000000000000247 1..132 1..121
AtMSD01 66 0.0000000000000468 1..132 1..121
EsilMSD02 66 0.000000000000112 34..128 33..114
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5152..5313 160 N° 2 3409..3550 140 N° 3 2510..2625 114 N° 4 2344..2433 88
complement(join(2344..2433,2510..2625,3409..3550,5152..5313))


exon

Literature and cross-references EsilMSD03 (Esi_0342_0001)
Protein ref. GenBank:   CBJ32474.1
DNA ref. GenBank:   FN648534.1 (5313..2344)
Protein sequence: EsilMSD03 (Esi_0342_0001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   169 (140)
PWM (Da):   %s   18400.17 (15626.7)  
PI (pH):   %s   8.27 (7.03) Peptide Signal:   %s   cut: 30 range:30-169
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAMGKKSSTPTLVGRCLALSTLAAVGASAQNLPVPPLPYSYGSLV
PFISEHALRVHHLGHHAAYTSQLNAVLERMRWDPELKHLAKMGVDELLHNLGSVPEDYRAAARRAGGGFVNHDLFWNVLSPWGGHPPGQESDTIETWWLSSCFSSSSSSWSYRRVMQAGYLAA*

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCATGGGGAAAAAGAGCTCGACGCCGACGCTGGTAGGACGATGCCTCGCCCTGTCTACGCTGGCCGCGGTTGGCGCGAGCGCCCAGAACCTCCCTGTGCCTCCCCTCCCCTACTCG
TACGGATCCTTGGTGCCCTTCATCAGCGAACACGCGTTGAGGGTGAGAGAAGGCCAGCATTCTTCTTTCTGCTGTAGACTACGGGTGTTCGTGTTTGTGTTTTGCGTGTGTTTCTTCTGG
TAACATGGACCGCGCTGACCCGGCTGGCCAACGGAAGTACTTTTTTTTGGTTTATTGCGGGTGTAGTCTATGCACACCATGTGTGGAGAGAGGGTAGCTCGGCTTGACCAAGGCAGGCCG
AGTGGGTATTGTAGTTTAGTGGAAGTCTTGTGCTGTGGAACGGAAGAGGCGGGTCCTGGTGAGAATCTGGCATGGACAACGCACCAGAAAGATTGCCTGTAGAACTAAACTCCAGACGTC
AATGTCCACAGGTCTACCCAAGGAAACCAAACTCTTTTTTTGGAATATGCCACTCGACTGAACCTATCCACCTGCATTTCGTAGTACATGCACTTTCGCGCCAGTATCCATCCGTGCTAC
AGTACTATGCCACGAGCATGTAATATTTCCAACAAGTAGTGCGTGCACAAGGGCCACACATGTCACGTACTCGGATGCACGGTTTCAATAGCAGTACTCCGTACAAGATATGTACTGCGG
CAAGAAGTACAACAACGCTGTTCAATATGCCTTTGCCGTGGTCTACATCTACCGGACGTGAACACATAACAAAATTATAGCCTCAATCATGGTTGATTCGTGCTGTGCGTCTTTTTCGGC
ATTGACCTCTCACTCAAGTTGTCCTCTACCATGGGAACAAAACCGTGCGTGAGCCCGGTGACTAGATACGTATACATATATTTCTCTCATACAGCAGTCGTGTGCATAGGCCCTCCATAT
GGCGAGTTATATAAGGCGAGTGCCCCAATATGGCGGGCTATATAAGGCGGGTGCCCAAATATGGCGGGTTATACAAGGCGGGTGCCCAAATATGGCGGGGTAAAGTTGGCTGGCGCAGAC
GGAACAATTAAGTTAATCTACACATTGAATAGGGCGGGTGCCCTGTATAGGTCGGGTGAATCGGTCTGGCGCATTCCCGCCTTATAGAGGGCCTACGACTGTATGCGTTTATGTTGTTTG
CGGGTCCCCCCGGGCGGGGAGCCAGCCCCCCCGGAGAAAGTATCGTATCGAATGATTCAGCGCCGACGAGGTCCGGGCACAGGGAACGGTAAACACCGGTACCCGCATACTCTACTACCT
GCCCGCCTAGTTTTACGGTGGTTGTGTTGAGGAGTAGTATGCCGGTTCTACGTTTGGTGTCGTTCCCAGCTCCCGGGTAAAATCTCCGCCTCTGTCTCTACCGTACAGCAGTCCAAGTAT
GCTGTTTCCTGCCGTGGTCAGTGGTTCTGGTGGAGGCCTGGTGACGCACTGAAAGTTCGGCTGCATTTTGTGCCGCTGTCTGCGTACATGTACATGGCCGTTAACATCTGGGTGTGGGTT
GCTCCCGGCCGTTCTCCTGGGAAAATGAAGTGTGTGCATAGCAGCCTTCCGTCTTTTCTGAGGATGATTTCCACGGCCCTTGGTGAACCCCACCGACCTGTTGAGCTGTACTTGCCTTCA
CGCATCCATCATGCCAGGGCGTTCCTTCACGACGCTCCTCTTTTCGCGTTTTTGTCGTTTGTGCTGTTGCATTCTATGTACAGGTGTCCACCACCTTGGACACCACGCCGCCTACACCTC
GCAGCTGAACGCCGTGCTGGAGAGAATGCGTTGGGATCCGGAGCTGAAGCACCTGGCAAAGATGGGAGTAGACGAGCTGTTGCACAACCTGGGGAGCGTGCCGGAGGGTGAGAGAGAGGG
AGACTTGGCGGGGTGGGAGGGGTGAACACACAAGCGCGCATCCCGTAGTCGGTAGGCCGTTGACCTCGCACCCATACAAAGCCGGGATCGGGTACGGATCACGGGTTCTCACCGGACCAG
GCTCTCATATCACCAAGTGCGAAGCACCGTGAGGTGTTCGGCGAGTCGCATGAATGGTGCGCTGCATTCTATGAAGGATATTCTGCATCTTGTGCTTGCTTCCTTGCGTGCGGTTGCGGC
CACGGGGGAGCGGGGGGGGTGAATGATGGAGGGTAGCAAAATGCAGCAGCGGGGACTGAACACGAGGGAGTCTTCTGCACGAAACGCATGGAGACAGAGCGGTGGCACATTGGTAGGTCT
ACGTTAACTCTTCACAATCAGCTGGTCCCAAGGGACAACGACTGGCATGAAACGCGTGCGGTGTAAAGGGAGCGCGCTGCTTCCGGATGGTTCGCCTGCAGCCTGAACAAGATGCACTTG
ACGTGCACTCGGTGGCACGCCCTTTACACCAAGAAAGAGTCTGTAATTTCCCTGGCTCAGTTGCTTGTTTCCGTGTTGGCTTTTTCTCACGGCTGTGGTACGTCGATGGTTTGTTGTGTT
TGCCGCATTTGACCAACGCCAAACGTACAACACCGAACCGCTGCATTTTTTGTTATGTTTTTTTCGTGGTGCTTTTTCGGTGGTCGCCATTTTTGGCTACTGCTGCCGCTGCCGGGGAAT
ACGGGTGGCGGTTATTTTTTCTCGGGGGGGTGGATGGATGGCGCTGTCAGACACTACCGGGCGGCTGCTCGTCGGGCGGGGGGAGGGTTCGTGAACCACGACTTGTTCTGGAACGTGCTG
TCACCGTGGGGGGGACACCCTCCAGGGCAAGAGTCGGATACTATCCAGGTGCGTCCTCGAGAGCAAGAGAGCGAGAATCGAGAACGTTTTTTGTTTTTTTGCCCTTTGTCGTTTTGTGGT
GCAGGAGAAACGTGGTGGTTGAGTTCTTGCTTCTCCTCTTCCTCCTCCTCCTGGTCGTATAGGAGAGTTATGCAAGCCGGGTATCTGGCGGCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCATGGGGAAAAAGAGCTCGACGCCGACGCTGGTAGGACGATGCCTCGCCCTGTCTACGCTGGCCGCGGTTGGCGCGAGCGCCCAGAACCTCCCTGTGCCTCCCCTCCCCTACTCG
TACGGATCCTTGGTGCCCTTCATCAGCGAACACGCGTTGAGGGTCCACCACCTTGGACACCACGCCGCCTACACCTCGCAGCTGAACGCCGTGCTGGAGAGAATGCGTTGGGATCCGGAG
CTGAAGCACCTGGCAAAGATGGGAGTAGACGAGCTGTTGCACAACCTGGGGAGCGTGCCGGAGGACTACCGGGCGGCTGCTCGTCGGGCGGGGGGAGGGTTCGTGAACCACGACTTGTTC
TGGAACGTGCTGTCACCGTGGGGGGGACACCCTCCAGGGCAAGAGTCGGATACTATCCAGGAAACGTGGTGGTTGAGTTCTTGCTTCTCCTCTTCCTCCTCCTCCTGGTCGTATAGGAGA
GTTATGCAAGCCGGGTATCTGGCGGCATAA

Retrieve as FASTA