1. Browse the Database
  2. View Redoxidase
Entry information : OsAPx06(LOC_Os12g07820)
Entry ID 1870
Creation 2006-06-28 (Christophe Dunand)
Last sequence changes 2006-06-28 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-03 (Marie Brette)
Peroxidase information: OsAPx06(LOC_Os12g07820)
Name OsAPx06(LOC_Os12g07820)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation Stromal
Tissue types Flowers
Leaves
Pannicles
Roots
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsAPx06
start..stop		 S start..stop
SiAPx06 573 0 4..309 3..311
TaAPx03-1A 571 0 4..309 3..312
HvAPx05 571 0 4..309 3..312
TaAPx03-1D 567 0 4..309 3..313
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3958687..3958752 64 N° 2 3958434..3958556 121 N° 3 3957967..3958087 119 N° 4 3957794..3957894 99
N° 5 3957604..3957691 86 N° 6 3956507..3956574 66 N° 7 3956339..3956425 85 N° 8 3955764..3955838 73
N° 9 3955600..3955677 76 N° 10 3955399..3955503 103 N° 11 3955300..3955317 16  
complement(join(3955300..3955317,3955399..3955503,3955600..3955677,3955764..3955 838,3956339..3956425,3956507..3956574,3957604..3957691,3957794..3957894,3957967. .3958087,3958434..3958556,3958687..3958752))


exon

Literature and cross-references OsAPx06(LOC_Os12g07820)
Literature Kikuchi,S. et al. (2003)
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science 301 (5631), 376-379.
Protein ref. UniProtKB:   Q2QWY2
DNA ref. GenBank:   NC_008405.1 (3958752..3955303)
Protein sequence: OsAPx06(LOC_Os12g07820)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   309 (305)
PWM (Da):   %s   33352.13 (33856.9)  
PI (pH):   %s   7.66 (6.17) Peptide Signal:   %s   cut: 31 range:31-335
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVVHRLLRRGLSAASPLPSLQELGRRPASSSAAAAGDAAAELRGAREDVKQ
LLKSTSCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFEIELKHAANAGLVNALKLIQPIKDKHAGVTYADLFQLASATAIEAGGPKIPMIYGRVDVAAPEQCPPE
GRLPAAGPPSPAEHLREVFYRMGLSDEIVALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFF
EDYAEAHAKLSNLGAKFDPPKGISLE*

Retrieve as FASTA  
Remarks Complete sequence from 10 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGTCGTCCACCGCCTCCTCCGCCGCGGCCTCTCCGCCGCCTCTCCCCTCCCCTCTCTTCAGGTACTAGTACCACCTACGACGCCTCCCCCCCTCCCTTTCGCTGTTCATTACCCG
CGCCGGCGGCGGACCGGTTCTTGATTTAGCGATGTCCCTTTCTTGATGATTTTTGTTCATTTTCTCCCCCGTGAAGGAGAGCTCGGGAGGCGTCCGGCGAGCTCGTCGGCGGCGGCGGCG
GGGGACGCGGCGGCTGAGCTGCGGGGCGCGCGGGAGGACGTCAAGCAGCTGCTCAAGTCCACCTCCTGCCATCCCATCCTGGTATGCTAATATATGCTTTGCTGCTTTAGTGTTCTTGTG
CAAAGATTGCGGGTTTGTATGGTTCGAAGAGTATAATGGGATTTTAGATTGTCTAGCTATATCCATGGATTTCGCATCTCTACAAAAGATTGTTCTTTGTGTGTTTAGTTAACTGGTCGA
TTATGCTATTTAAAACAGTAACTTTTACTTCGAGAAGATGCAACTGCTCTAGTTCACCTGTGTGCAAGAAGACTGTAACACGTTCTATGCACAATATTCGCTAGATTTGTGCAGTTCATG
GTTCTGCATCTGCTTGATCGAACATTGCATATTTATGACTTGTCTGCTGGGTTAACCTTGGTTGCAGGTGTTCGGTTAGGGTGGCATGATGCTGGTACTTATGACAAGAACATTACTGAA
TGGCCAAAGTGTGGTGGTGCCAATGGTAGCTTGAGATTCGAAATTGAGTTAAAACATGCGGCTAATGCAGGTAGTGCTTCTGTTCTGTCATTATCTATTGTTCGTGATTCATGGTTATCC
TTACAATAACCCTCTACTTCAGGTGTCTTGTGAATGCTTTGAAGCTGATCCAGCCCATCAAAGACAAGCATGCAGGTGTCACTTATGCAGATCTGTTTCAGCTCGCCAGTGCTACAGCCA
TTGAGGTCCTTTTGTCACTTTAGTCTAATGATAACTATGAACTATCATTCAAACAGTATTTATTATTTAATGCTGATATGATTGCTTTGGTCTGTTTTAAAACTCAGGAGAAGCCGGTGG
CCCCAAGATCCCCATGATCTATGGAAGGGTTGATGTTGCTGCCCCTGAACAATGCCCGCCAGAGGGGAGACTTCCTGGTCAGTAGCTTTTGGGTTCTGTAGCCCAAATTTGTTCGTTACC
GTGATTTATCATCTGGAAACTAAAATATAATGCTGTACCTTTAGTGTCATGTCACACTGATCCCAAGTTGCTATTACAATTGGCCATCTTCTTGCAGCTTCATTTCGCAAATTCTACTTT
CTCCTTATTCATTAAACCTAGAATATTGATAACTTTCAGAGCAGAACTGATATGTGTTCCAACACTCAGAAATGAAGTTACAAATATACTCTATTGGTCCTCTTGTTTAATCTCAATTTA
TGGGTTATCATGCAATTGAGATACCTGATTGACATAGGAAATCGCGCATATCCATCTTTATTTGTCTGCAATCTATTTACATCAAAATCAAATTATTTAGATGTAGTGTCAACAATAGAA
GACATTAATATAAATTGATAGTTTTCTTGCTAACCTACTGTAATAGTCCTGTTTTATTTCTTCTTTAATGATAAATTTATTTTCTTAAATGGACAATGGTCTGCCTATAATAGGCTATTA
CATTCGTGGTAATGCCTCTCAGATTCAACTTATTTAGAAGGTTTAGGCGTGGTATCTTATCCATGTATCTATGGGTTTTACTTCATGAAGTACTAAAATTGATGCTAACTGGCTAAAAGC
ATGAAAAAACAAGTTTCTTATGAAATATTGCCACCGTGAGCTCTGTAATCTGGTGTAATAACATTTTGGACATGCAAATGTGTAAGAAAGATTACCCCAATTGCAATATAACAGAAAAAT
TGTAAGCTGCACATGCTGTGCAGAATGAAAATCAGTGCTATGATTGCACTTAACCTGTGAGATTGATAAAATATAGCTCCCCAAGAATTGCAGCACTTTCAGCTGTTTGTTTTTGTATTC
ACATGACATTGATATATTTCCTGCTGTGTCTTATAGTGTACTTTGATATTTGAAATCTAGTGCTGATGATGATCTAATCCTCTTTCATATGCATGTGCTTTCTGTTGCAATTTTGTTCCC
TATATTTTACATTTCCACCCTTTCAGCTCTGCTGGCCCTCCTTCACCTGCGGAACATCTACGAGAAGTATTCTATAGAATGGGCCTGAGTGACAAGGTACTTGCAGATTGCTTCATTCAA
TATTCCAAACAACTTTTTCTGGGGATTTGCTAGTTACATCTGTTTTGTGATCTGTAGGAGAAATTGTTGCATTGTCAGGAGCTCATACACTTGGACGATCTAGACCAGAGCGCAGTGGAT
GGGGCAAACCAGAAACTAAATACACTGTATGTAACTTATATAGTTATATCAGTAGTAGGTTATTGTTCTGATTTTAGTAACGCCTTGTCCATGATTCATTTTGGAGTATTGCATGTTATT
TAGTTACTACGTATTTTTTAGATTAGCCAATGGGATAATTAAGTTGTCATCACTGGCAATGCTTATTGATCTTGCATATATCTCTTCCTTGTAAAAGCTCTGTATTGAAGATCTTTATAT
GATTTATTACTACTTCACCGAAGAAAATAAAGAGATGCTTCTGCGCTGTTGTGTTAGTTGACCATATTATGCTTCATCTCTAATCGCGGATGACCTATATTAGCATCAATGCTACAAACT
TTCCTACTACAGTGCTTATATGCTTTCAAATATGTTCTTGTGGGTAGTAGACTTGCAGTATTAACTATATCTAGCATGCACTCCTTCATGAAGTTCTTGCTGATGAATGTTCTGAATGTT
GAATTTCTTGTTTGGCTAATTGATTAATTTCTTTTGACTCGCAAAGAAAAAAACGGACCTGGTGCACCTGGAGGGCAATCTTGGACATCACAGTGGCTGAAGTTTGATAATAGCTACTTC
AAGGTAGGATGCACTATTTTCTTTATCAATACCAAACATGATAGCAGTTACAATTTACAAAACTTATGTTAGTCTGCATAAAATTTAAGGAGACATCAAAGAACGCCGAGATGAGGACCT
TCTAGTTCTGCCTACTGATGCTGTGCTCTTTGAGGACTCATCATTCAAGGTTAGTGAAGATTCTCATCAGCTCTTGTTGTAAAGAACTGCAAATCAAAAGTGACGCTCTAAACTAAAAAG
TTTTGCTTGCTTGCCATGCCTGAAGATATCTATGCTGAAAAGTACGCCGCAGATCAGGATGCATTTTTTGAAGACTATGCTGAAGCTCATGCCAAACTGAGCAATCTCGGAGCAAAGTTT
GATCCTCCAAAGGTAAGTGAGATTAAAGACTAACATTACTGGAATTAAAAAATGTGCAGTCAACTTGACATGGTTATCACTGAAATGACACAGGGGGTATTTCACTGGAATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGTCGTCCACCGCCTCCTCCGCCGCGGCCTCTCCGCCGCCTCTCCCCTCCCCTCTCTTCAGGAGCTCGGGAGGCGTCCGGCGAGCTCGTCGGCGGCGGCGGCGGGGGACGCGGCG
GCTGAGCTGCGGGGCGCGCGGGAGGACGTCAAGCAGCTGCTCAAGTCCACCTCCTGCCATCCCATCCTGGTTCGGTTAGGGTGGCATGATGCTGGTACTTATGACAAGAACATTACTGAA
TGGCCAAAGTGTGGTGGTGCCAATGGTAGCTTGAGATTCGAAATTGAGTTAAAACATGCGGCTAATGCAGGTCTTGTGAATGCTTTGAAGCTGATCCAGCCCATCAAAGACAAGCATGCA
GGTGTCACTTATGCAGATCTGTTTCAGCTCGCCAGTGCTACAGCCATTGAGGAAGCCGGTGGCCCCAAGATCCCCATGATCTATGGAAGGGTTGATGTTGCTGCCCCTGAACAATGCCCG
CCAGAGGGGAGACTTCCTGCTGCTGGCCCTCCTTCACCTGCGGAACATCTACGAGAAGTATTCTATAGAATGGGCCTGAGTGACAAGGAAATTGTTGCATTGTCAGGAGCTCATACACTT
GGACGATCTAGACCAGAGCGCAGTGGATGGGGCAAACCAGAAACTAAATACACTAAAAACGGACCTGGTGCACCTGGAGGGCAATCTTGGACATCACAGTGGCTGAAGTTTGATAATAGC
TACTTCAAGGACATCAAAGAACGCCGAGATGAGGACCTTCTAGTTCTGCCTACTGATGCTGTGCTCTTTGAGGACTCATCATTCAAGATCTATGCTGAAAAGTACGCCGCAGATCAGGAT
GCATTTTTTGAAGACTATGCTGAAGCTCATGCCAAACTGAGCAATCTCGGAGCAAAGTTTGATCCTCCAAAGGGTATTTCACTGGAATAA

Retrieve as FASTA