Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
307 (288) |
| PWM (Da): |
33859.23 (31819.2) |
|
| PI (pH): |
8.88 (8.65) |
Peptide Signal: |
cut: 20 range:20-307 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTRGRGAIFL AFVPAFCMAS PLEADLKVGF YEATCPKAEL IVRKEVEKVF KEDNGIVADF VRMHFHDCFV RDSPVNSPSL EGFDVIDNIK SRLEATCKGV VSCADIIAFA ARDSVKLSKG
IYYDLPSGRR DGRLSFSSET FTDLPPPSDN LHQLTHKFAR KGLSQKDLVT LSGAHSIGNA DCTSFSDRLY NFSATEKTDP SRHEPAYAAQ LKHECPPGIN GTNVLIDPRS PLALDSSYYR
DLIRNRGLLT SDQTLMSSHA TARQVKAFRK NSLFKKKFAK AMVKMGNIGV LTGYEGEIRL NCRVVNS
|
Retrieve as FASTA
|
|
| Remarks |
Incorrect prediction from Lemna.org. Part of exon 4 is missing. Frame shift |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TAGTTGCACC ACCTTGTCGT CCGCGGCCAT GAACATGGTT TGGTTTGTTC CTGTATTTAT CTTTATTCTC CCTGAATGCC CAATAAGAAT TGCTTGCAAC CTCCAAAAGT TGCATGTAAT
GGTTCAATAA AAATCATTAT ATTACAAGTC TACTCGATCA GAATCCATTG AAAAACTGTT ATAACAGAAA GAGATCTATC GAGAAATATC TCTTTAAAAA AGTATTATTC TCACACCGGT
TGTTACTATC TATACTACTA TTATTCTTCA AGATAAAATT TTCCTCGTTA TTACGATAAT GGCCAATCAT TATGTGAGTT AATCTGAGAA TTAATCGTGA ATCCAGCATA TCCGATTAAC
TCACATGATG AGTTGATGAC ACATTCCTCC GTGGTCAAAG ATCTCACTCA CTCCGAATTT CCTCCAATTT CAAATCAAAC TCAGTCGAAT ATGTCTGGTC GTGGTCGAGG AGGACCTAGG
GGGCAATCAA ACAGAGGACG TGGCAGAAAT GGGGGCAGAT ACACTCCGCG ATGCCAAATT TATTGGCAAT TCGGACATCG CGCTCAAGAT TCTCGGGAAA GGTTCAATAA GATCTATTAT
GGATGGAAAA ATCCACTTCC AAGTGACCAG AAAGCACCTC ACGCATATAT ATCTTCCATG GCACCCCCTC AACTGCAATG TGACAACACA AATTGGTACC CTGATAGCGG ATCAACACAT
CATGTGACCA ATGATCCACA AACCCTCAGC GATCCAGCAT TGTATCATGG AAGCGATCAG CTGCAAGTTG GGAATGGAAC AGGTTTGAAA ATATTCTCAA CTAGAGCCTC CACTCTGTGT
TCAAATTGAA ACTCAATAAA GTTACTAAAT ATTCTGCACG TTCCAGAAAT TCAGAAAAAA CCTCCTCTCG ATTCATAGAC TAACCAATGA TAACAATGTC TATGTAGAGT TTCACGCTAC
ATACTGTGTT GTGAAGGCCG AGTCAACCGG GAAGCCCCTG CTCAGGGGAA TAGTCAAGGA CGGACTTTAT CTTCTTCCTA ACACAAATAA TGCACAAGCT TTCCTGAGTC AGAAGGTAGG
GTTGGACTTA AGGCACAAAC GGCTTGGTCA TTCAAATTTC AAAGTTCTTA GACATGTGAT CGCCTCTTAT GAGCTGCCCA CTCTGGTTGT CAATAAAACT CACTTTTGTG AAGCGTGTGC
ATCATCAAAG ACCACAAACT CCCTTACTCT CCATCACTTC ACCATTCGTC ACAACCATTG GAATTGATCC ACTACGATCT GTGGGGACCT TCGACGATTG TATTTCATCT TGGTTACAAA
TATTATGTCA TCTTTATTGA TGACTTTTCT CGGTATATGT GGTTGTATCC ATTGAAGCAC AAGAGTGATG TCATGCCGAC GTTCAAAAAC TTCCAGAAAA GAGTCGAAAG ACAGTTCAGT
CTGAAAATTA AGAATTTTCA GTCAGACTGG CGAGGCGAAT TTTAATATCT AAACCAAAAT CTCAAGGATC AAGGGATATT TCACAGGATA TCATGCCAAC ATACCCCATC TCAAAATTGC
ACAGCAGAGA GAAAGCACAT ACACCTTGTG GAGGCAGCAC TTGCTCTCCT TAAGCATTCA AGTTTGCCGC ACAGATATTG GGACGAAGCG GTGTCAACCG CTACCTATTT GATAAACTAA
ATGCCAACAC CATTGCTGAG GTACAAGTCT CCTTTTCAAA TGATCTGTAA CTGTGAGCCT GAGTACAAAT TCCTAAAAAT TTTGGGTGCT TGTGTTATCC ACAACAAAGC TTGATTCTAG
ATCCGAAAGG TGTGTGTTTC TTGGTTAAAG TGCTTTTCAC CATGGCTACA GATGCTTGTC ACTATTAACT GGTCGAATCT ACATCTCAAG GGATGTTATT TTCAATGAAA GTTCACTGTC
ATTCACAGAG AAATCCAATC ACTACAATTT CTCCACTCAG CCAAGCAAAG GTATAATGGG TGCATCTCCA CTTGACCAAG
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACTCGGG GCCGGGGAGC GATCTTCTTG GCTTTCGTGC CTGCGTTCTG CATGGCTTCT CCGCTGGAAG CTGATCTTAA AGTGGGCTTT TACGAGGCCA CTTGCCCAAA GGCTGAGCTG
ATCGTGAGGA AGGAAGTCGA AAAAGTTTTC AAAGAAGACA ACGGCATCGT GGCGGATTTC GTGCGCATGC ATTTCCATGA TTGCTTCGTG AGGGTAAGCA TGTCTCCAGA CCTCGTAAAT
AGTTTAATAT TTTCTCGACC ATCGCACTGA AATAATATGC TCTATTTTTA TGGTTGCGAT GGATCAATCC TCCTGGACTC TACGCCGGGT AACACTGCAG AAAAGGACTC GCCCGTCAAC
AGCCCTAGCC TGGAAGGCTT CGACGTCATT GATAACATTA AAAGCAGACT CGAAGCCACC TGCAAAGGCG TAGTCTCGTG CGCCGATATC ATTGCCTTCG CGGCCAGAGA CAGTGTCAAA
CTGGTACGTC CTCTGTCCTG GAAATCAAAT ACTGTGTAGG AGTTTTTATT TATGTAAACA ATCTCTATCG ATCTATGCAT GTCTCATTTT ATCTTCCTCC TGATTGGCAG AGCAAAGGTA
TCTACTATGA CTTGCCTTCC GGAAGACGGG ACGGAAGATT GTCCTTCAGC TCGGAGACGT TCACGGACTT GCCTCCGCCG TCAGATAATC TTCATCAGCT CACACACAAG TTCGCCAGGA
AGGGCCTGTC ACAGAAGGAT TTAGTCACCC TCTCCGGTGA GTATATACGA TATATTTTAA AAGGCTCCGC CCGAGCGTAA GTCTAATCTA AGTCATCTTA CTTCATGCGG GTGTACAACA
GGTGCTCATT CCATCGGCAA TGCTGACTGC ACCTCGTTCA GCGACCGGCT CTACAATTTC AGCGCCACGG AGAAGACAGA CCCGAGCCGG CGTACGCCGC TCAGTTGAAA CACGAGTGTC
CCCCGGGAAT CAACGGGACT AACGTGCTAA TTGATCCTCG CTCCCCCTTG GCGCTCGATT CTGTCAAAGT AAAGAGAGGT AAGTATATTG TCGTGAATAG TTTTATTTTT CTTTTTAGTT
AGTGAGTCAA TATGTTAGAT AAGTCAAACC CACTCATAGT CAATCGGGTG ATTTATCGGA CTCGGTATTA ATCAGGTTGG GTCTTATTTG GGCCCAATAT TACTGATGCT GAGTGTGTAT
AAATAGATAA GTGGGGGGAG GCGAGGAGCC CTTATGAATT GATAACTCCT CGGGATTCCT TTTTTGTGCT CTCTGCTTGT TCTAGGGTTC CGACAGAAGC CCCCATTGAA GTGGAGAAAG
ATCGGAGGAG CTGTGCGAGG AGATTTCTGC ACAGGATATT GCTGTGTCTT TTCTCTCCTC AGTTTTTTAT TTTCTCTGAT CGCGAGGTGT TGAAGGTTCA AAAGTCAACG CCATTTGTGA
CATGGTATCA GAGCTTCGCC GTGAAAGGCT GTCCTGGTGA GATTGTTTCA GTTCTTTATA TCTTCAATCA GAAGCTCTTT CCTGCGATTG AAGTCTTTAA CCATCAGTTC TGATTTTTCA
TCTCTACATT GAGAGATATA TCTTTGATTC GAAGGTTCTC CGTTTATCAA TGCCCTCTTT GCCGCAAAGA CACATTATCT GATCATCGGC TATATTATCT AACGTGATCT TGCGAGTTTC
TTTTAAGCAT CTTCAAAGAA GCAGAATATT GATTTCAGGA ATCTTGAAAT CAAGATTGGA TTATTTGCTT GACAAAATTA TTACTAGTTA CAGGAATCTT GATCTGAAAT CAATTAATTC
GACTTGGATA TTGGATCATC TGCTTGATAT CGAGGGAGTT TCTGCAGATT AAGGAAATTT CTTGCTGATT GAAATCAGAT TACCTGCTAA TTAGAGAAAC TCTGAGATTT CTTGCTGATT
ACAGTAGACT GCTAATTAGA GGAATTTCTG CACTCATATT CACAAGAAAT TCCTTTTTTC ACTAGAATCA CCTATTCAAA ACTACTAAAA CTCAGAGGTG ATTGGTCTAT CAGTTGAGGT
AAAGATGTCA GACAGAAATG TTTCTGAAAG TCAGGTACAA AAGGCCGACG AGGTCATTAA TTCTGAAAAT CCAGTTGAAA TAGTGTCATA TGATTCAAAA TGGCTAAATC AACTAGTGAA
AGTCCCAGAA CGTGAGTTGT TCACTGGGAA TAATCTCTTT AAGTGGGAAG AGTATATAGG AAGAATACTT AAGCCCAGGA AATTAATGCA TCATCTCCTT AAGTCAGGTC CAACTGAAGA
GGATCCCAAT TATCATAAGT GGTTAGATAC AGAAACTATA CTCTTTAGTT GGCTTCTAGA TTCAATGACT CCTGATTCAG CAGAATATTT TAGACATGAG GAGAATTGTA AAGCTATCTG
GGATAAAGCT CACTCTCAAT TTTCGAAAAG AGATGATGAA GCCCGAATTC ACACACTATT AATGGCCACT ACCAGGGCTA CTCAGGGACA ACGGAGCGTT AAAGAATATG CTAATGACCT
CATCAACATG TGGAAAGAAT TGGATCACTA TCGACCACCA GTGACCAATT CTACTGATAG GAGTTATGTC CTTAGAGACA GGGCATTTTT CTTTTTAATG GGACTTAATC CTGAATATGA
GTTATTCAGG ACACAGATGT TCAATCGAGA AAATAAACCA GACCTTGATA CTGCCATAAA TGGAGCTATA TGGGAAGAAA GTCGACATCA ACTATCAAGG GGTATGAACT TTCCATCTAA
CTCAGCATTT ATAATGCAAA CTAAGGGACA AGTATCCAAG GATAAAACTA CTATTCAGCC TCCTCATAAT ATTTTTCCAA ATACACAAGG AGGAAACAAA GGAAAGAACT TCAAATATGG
GAATAAAGGC AATTATTGGT GTGACTACTG CAATAGGAAG GGACATACTC GAGATAGGTG CTGGAAATTA CATGGTAAAC CTACTAATGT AGGTCAAGGA CATTTGGTCA TGAATGCACA
AGGAGAAGCA CAACAGACTG AAGATCTTAA AACAGTGATT GATCAACTAC GAGAAGAAGT AAGGGAGTTG AAGAACAAAC CAAAAGAGAC TACAATTGCA ACTGCCTCAG CTTCTATTGC
TTCTACAGGT AAGACTTCAG ACATTGTAGG ATTTGCATCA GTTGCAAATA ATAAAAAACT CTTTGCTTCT GAATTTAAAA CTGTAAATCC ATGGATTTTA GATTCAGGAG CTAGTGATCA
TATGTCCCCT ATCTCAACTG AATTTTTGTC TTATCAGCCT TGTGCTAGCA ATAAAAAGGT CCAAATAGCA GATGGTACTT TACTAACTGT TGCAGGAACT GGAAAAATTA GAGTAGAGCC
AATTGGGATT TTAGAACATG TATTACATGT ACCTAAATTG TGCATAAGTC TAGTTTCAGT TCAAAAATTA GCAAAATTAG AAAATATCTC AGTTATATTT GATGATGATG AATCTTTTTT
GCTAAATCAC ATATCTCAAC AGAGGACTGG ACTTGCTAGA ATAACCAGCG GACTCTACTA CATCTTGGAG CATGGACAAG CTTCAGTGGC ACCATAGAGC TCCTACAGTG GACGAGAAGA
CTCTTACTTT GTTGCATCAA AGACTTGGAC ACCCTTCTCT GCCTGTTTTG AAGGCAACCT TTCCCAATCA AATAAACCAG TATCAAGACT TCAAGTGTGA ATCTTGTGAA CTTGCTAAAC
ATAAAAGAAG CACATATCCT AAATCTACTA CTAGAAGTGA GAAACCTTTC TATCTCATTC ATACTGACAT ATGGGGACCA GCGCCAATTG CTAGTCTCAA TGGATATAGA TACTTCTTAG
TATTAGTAGA TGATTGTACA AGATTCACAT GGGTGTATCT CCTACACCAT AAGTCTGAAA CTAAAAGTAT TATCCAAAAT TTCTATAAGA TGATTGAACA ACAGTTTGAC GTGAAAATTA
AGACCTTTAG ATCTGATAAT GCCTCTGATT TTTGTAACTC TGAACTATTA CATTTCTTTG AATCAGAAGG AATTGTACAT GAAACTTCAT GTACATACAC CCCTCAGCAA AATGGTATTG
CTGAAAGGAA AATTGGCCAT ATTATGGAAA AAACTAGGGC AATTCTCATT CAGAGTCATG CTCCCAAAAT TCTATGGGGA GAAGCTGTAC TAACCTCTAT ACATTTAATA AATCGATTAC
CCTCTGTAAT TTTATCTTGG ACTTGTCCAA TTGACATTCT GATCTCCTTT TTTCCAAAGG TAAACCTGAG GAGTAATTTA CCTCCTAAAG TCTTTGGGTG TATATGTTAT ATCCAAAAAC
CAGCAGTTTA TCAAGATAAA CTTGAGGAGA AGGCATACAA AGGAGTATTT GTAGGATACT CTAATACCAA GAAAGGATAC AAGTGTTATG TACCGTCACT TAGAAAATTA ATTATTTCTA
AGGATGTTAC ATTTCACGAG GAAAACTTCT ATTACACGGA CCAAGAAGTT AAGGATAGTG AAGATGAAGA ATTCAACCTT AACTATCTAT TGGAATTTTC TGATTCCAAT AAAGATAAAG
TCAAGGATAA TAGTGGTATT GAAACCCCAG TCGCTAATGA AGAAAATAAT TCTTCATCAG AAAATGGAAT TAATAACTCT GAATTGCCTA CAGATCCTGA ATTAGGTGAT AATGGAGACA
ATAATGATTC ATTAGTAGAA ATTGATCAAG ACTTAGAAGA ACCTATAGAT CCCATTGTTC CTGAAAAAGG GAGAACTAGC ACTAGGGAAA GAATTCCGAA AAAATTATAT CCCATAGAAG
ATTATCTTAC TTTCTCAAGT GCTTCAATAG AACATAAAAG CTTCCTTACC AATGTTATGC AAGAAACAAT TCCATGTAAT GTGGAAGAAG CACTGAGATA TTCACAATGG AAGCAGGCCA
TGGATGAGGA ATTAACTGCC CTTAGAAAAA ATAACACTTG GGAAATTTGT TACTTACCCA AGGAAAAGAA GGCTGTAGGG TGCAGATGGA TTTATACTAT AAAGTATAAA TCAAATGGAG
AAGTAGAGAG ATATAAAGCC CGATTGGTTG CAAAAGGATA TACCCAAAGC TATGGAGTTG ATTATTTTGA CACATTTGCC CCAGTGGCAA AAATGAACAC CATAAAAATA ATTATTTCAT
TAGCAGCCAA TAAACATTGG AAATTATTCC AATATGATGT TAAAAATGCG TTTCTTCATA GTGAACTAGA GGAAGAAATA TATATGCATC TTCCTCCAGG TTATGATCAT AAATTTCCAG
CTAATTCAGT CTGTAAATTA CATAAAACCA TTTATGGGTT AAAGCAGTCT CCACGAGTCT GGTTTAATCA ATTTCATAGA GTAATGAAGA AAATAGGGTA TAATCAAAGT CAAGGAGATG
ACACTATGTT TTTTAAACAT TCAAACTCAG GGGGAGTCGT GATTTTAATC GTATATGTAG ATGATATTAT AGTTACAGGA GATGATATGG CAGAAATCTC CAAATTAAAT TTGCATTTGA
CTCAAGAATT TGATATTAAA CACCTTGGTC AATTAAAATA TTTTCTTGGT ATAGAAATAG GATATTCATC ATCCAATATT TTCTTATCTC AACATAAATA CACTCTAGAT TTACTGAAAG
AGACTGGTTT TTTAGATTGT CAGCCAGTCA ATACTCCAAT TGATCCTAAT CATAAACTAA ATAGAAATGA TGAAATTGAA AGTGTGAATG AGAAATCATA TCAGAGATTA ATTGGAAGAC
TGATTTATTT GTCTCATACT AGACCAGACA TTTCATACTC TGTAAATTGT TTAAGTCAGT TCATGCATTG CCCTAACATT TCTCATTTGC AGGCTGCTCA TCGAATATTA CGTTATTTAA
AAGGGACAAT TGGCTTGGGA TTATGTTATA AGTCTGATGA AAATCTGAAA CTAACCATGT ATACAGATGC AGATTATGCA AGTTCACTCT TGGATCGCAG GTCAACAACT GGAATTTGCT
CATTCTTGGG GGGAAATCTC ATAACATGGA TGAGTAAAAA GCAAAATGTT GTGTCCACTT CAAGCGCAGA GGCTGAATTC CGAGCAATAT CACAGGGAAT TAGGGAGATT ATGTGGATAA
AGAAAATTTT AGATGATTTA AAGTTTTTTA TTCCTTTACC TATCCAATTA TTTAGTGATA ACAAGTCTGC AATTAATATT TCCCATGATC CTATACAGCA TGGCAGGACT AAACACGTGG
ACATAGATCG ACATTTTATC AAGGAAAAGC TAGAATTGGG AATTGTCTGC ATTCCCTACA TCAAATCGGA GGACCAACGG GCAGACATAC TCACAAAGGG CCTGCCAAGA CCTCAGTTCC
AGATGCTCAG AAGCAAGCTT GGAATGGAAG ATCTCCATCC CGTCGCTTGA GGGGGAGTGT CAAAGTAAAG AGAGGTAAGT ATATTGTCGT GAATAGTTTT ATTTTTCTTT TTAGTTAGTG
AGTCAATATG TTAGATAAGT CAAACCCACT CATAGTCAAT CCGGTGATTT ATCGGACTCG GTATTAATCA GGTTGGGTCT TATTTGGGCC CAATATTACT GATGCTGAGT GTGTATAAAT
AGATAAGTGG GGGGAGGCGA GGAGCCCTTA TGAATTGATA ACTCCTCGGG ATTCCTTTTT TGTGCTCTCT GCTTGTTCTA GGGTTCCGAC AGAAGCCCCC ATTGAAGTGG AGAAAGATCG
GAGGAGCTGT GCGAGGAGAT TTCTGCACAG GATATTGCTG TGTCTTTTCT CTCCTCAGTT TTTTATTTTC TCTGATCGCG AGGTGTTGAA GGTTCAAAAG TCAACGCCAT TTGTGACAGA
TTCCAGCTAC TACCGAGACC TGATAAGGAA CCGCGGGCTG TTGACGTCGG ACCAGACCCT AATGTCCAGC CACGCCACCG CGAGACAAGT GAAGGCCTTT CGCAAAAACT CCCTCTTCAA
AAAGAAATTT GCGAAGGCCA TGGTGAAGAT GGGTAACATT GGCGTGCTCA CCGGATATGA AGGAGAGATC CGTTTGAACT GCAGGGTCGT CAACAGTTAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACTCGGG GCCGGGGAGC GATCTTCTTG GCTTTCGTGC CTGCGTTCTG CATGGCTTCT CCGCTGGAAG CTGATCTTAA AGTGGGCTTT TACGAGGCCA CTTGCCCAAA GGCTGAGCTG
ATCGTGAGGA AGGAAGTCGA AAAAGTTTTC AAAGAAGACA ACGGCATCGT GGCGGATTTC GTGCGCATGC ATTTCCATGA TTGCTTCGTG AGGGACTCGC CCGTCAACAG CCCTAGCCTG
GAAGGCTTCG ACGTCATTGA TAACATTAAA AGCAGACTCG AAGCCACCTG CAAAGGCGTA GTCTCGTGCG CCGATATCAT TGCCTTCGCG GCCAGAGACA GTGTCAAACT GAGCAAAGGT
ATCTACTATG ACTTGCCTTC CGGAAGACGG GACGGAAGAT TGTCCTTCAG CTCGGAGACG TTCACGGACT TGCCTCCGCC GTCAGATAAT CTTCATCAGC TCACACACAA GTTCGCCAGG
AAGGGCCTGT CACAGAAGGA TTTAGTCACC CTCTCCGGTG CTCATTCCAT CGGCAATGCT GACTGCACCT CGTTCAGCGA CCGGCTCTAC AATTTCAGCG CCACGGAGAA GACAGACCCG
AGCCGGCATT CCAGCTACTA CCGAGACCTG ATAAGGAACC GCGGGCTGTT GACGTCGGAC CAGACCCTAA TGTCCAGCCA CGCCACCGCG AGACAAGTGA AGGCCTTTCG CAAAAACTCC
CTCTTCAAAA AGAAATTTGC GAAGGCCATG GTGAAGATGG GTAACATTGG CGTGCTCACC GGATATGAAG GAGAGATCCG TTTGAACTGC AGGGTCGTCA ACAGTTAA
|
Retrieve as FASTA
|
|
