Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
90 |
| PWM (Da): |
9971.69 |
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| PI (pH): |
8.33 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGDSNLSSIN LRSPRAFDNA YYVNLNSRRG LFHSDQELFN NCAADFIFCS YESCSSDFFR DFVAAMIKMG NTSPLTGSNG KIRRICSRMN
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Retrieve as FASTA
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| Remarks |
Incorrect prediction from Lemna.org. Only last exon was found. No sequence upstream. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGATTCCAGA AGTGTCATTT AAATAAAGAA TGTGCGTTTA CACTAGTCTG AACCAAGATC GGTCGCAATG CGTGCTCTTG TAGGTGGTCC ATATTTAATA CACGATGGTA ACCAAGATTG
GTTGAAAACA AGAAGAATAC GTGACCAATT ATTCTCTACA AATAATCCCT CCATGACAGA GAAAGACATG AAGAAGCACT GCCAAATCCA GTGCTCTGCA AGATAGATGA GATGCTCATT
TAAAAAAGCT CAAAGGGTAC TCCTTAGTCC CTAAAAACAC GCCATTATGC AAGGATCAAA ATTTCAATAA CCCTAGCTAC TTTCCAACAT CTCCTATTCA AAGAACCTCT CCTTCTTGAA
ACTTGTAACC AGTGGATAAT CGACGATAGA TCGCATCGTT GTCTTCGGCC GTATAGAGCT CGATAGACCA GCATTCAACA AGTTGCATAT TGAGGTAGAT CTTCATGACC TAATGTTACA
GGGGAAGCTT AGGCACATTC CCAGTGTGAC AACAGAATCT TTGACTAAAA TAGTTATCCG TCAAAATATT TAACGAACAA ACCTTGTTCT TGAACAATAC TTCGACTTCT TTTTTTCTTA
TTATTATTAT TTACAATCTT TTGTCAGTAG CTTATTTCAT GCCTTGAGAT AAACATTTAG ATGGAGGACA TATAGCGTGG GGATAATTCA GGACTTGCAT CGGTATGATC ATCTATCACT
TTCATGATAG CAGTACACGT AAAGAGTCCC CTACGTACCT CTAAGGTAGA CACTCGAGAA TTGAGATAAT TTCAGCCAAA GGACCTCTAA GATAGACATA TTCAGATATG ACAAAGTACT
CGAAGTAAAC CCTGGTTACG TGACCATATA TAAATTTCTC ATAGACTCGC AATGAATATT CGAGGAACTA TAGCGAGCAT ATCTTGAAAA TTAGCTGAGG GCTTTATCAA ATAATAGAGT
ATTTAGTTGG TAAACGAGGA TAGCAATGGC AGAGATGAAC AAGGATAGTT GGTGAATTTG CCGCTGATTA ACATTGAAGA AGAGAAAATC CATACCAGGA TCTCTTATGA CATTATTACG
TACATTATCA TTGCATCAAC ATCAAGGATA TGGCATGCGG AGCCCCTTAG TTCACCCTGA TGCAGACCCG CCTGATTTAT TTGTTGGAGC CAGTGAGGGG GCTCATGTTA CCCATCTTAA
GAATGGCAGC CACGAGGTCT CTAAAGAGGA CGAGTGTGTT GAAAGTGTAG GTGCAGATGA TGGAGTCTGT TGAGCCATTG TTAAAGAGCT TCAGGTCGGA GTGGAAAAGT CCCAGGCCAG
TGATGAGGTT TGCGTAGTAG GCCTTGTCGA AGGCCCTTGG CCTGCGGACC TCCACAGGCA ATAGGTTAGT GTCGCCACCC AATCACGAGT AGCTGGCCTG CCTAGACATA GCAAATGCGG
GCTCGATGTT GGTGTTGTTA TAGATGTGGT TCCAGAAGGT GGCACACAGA GAGACGCCAA AGGGGTGCAC TCCAAAGAGG GCCACAAGGT CTCGCTGGTT TAGGCCCCGA TTGGCGAAGG
TGGTGGTGAG CATGGAGAAG CTGAACGACG GGCTAGGGAG GCTGTTGTTG GATGCACTCT AGCTTTCTAT CCTCGTGTCC CCAAAGGCCC TCCACTCTAT GTACTGAAAG AAAGATTCCT
CCTCTCTTCT TAGACTTTGA ACACACAGAT AAAGCATGAA GAAAAGGGTG GCCGATAATG GGTGAAAGGT CCCTCACTAC AAATATGTCA TCCCTAGTGG CAAGGGCCAA GATGTCTGCT
CAAGACACAT TGCCATTGCA CAACGCCTTG ACGCTGAACT TGATTGCCTC AACGACCTCC ATTCTGTGGA TAGAGTTCCT ATTCAAAGGG TTCTGTTCGT CGGTGAATGT CGCAGTATAC
GCCAGGAGAT TAGGCGCATT GCGGCCCTAC AGGAAGCAGA ATTGCACTGC AACATTCGAA GGGAGCAATG AGTCCCTCAA
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Retrieve as FASTA
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DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTCGG CACTAAAGCA TATAGGTGCC CTGGTCCTAC TTCGTTCAAG GTAACCATCA ATAGAGATGT ATTTTTGAAG AATCTCACTA TTCGGACTAC AGCCAATAGG GTGATCAAGG
CTTTGACCTA ACCTTATCTT CAACTATTGA ATTACTCAAC CCACATGATG ACCCTACAAT TGTAGAAGAA TCAATGTCAC AATCATATGT TCCCTCTCGT GAGAGAGTTG ACCAAAGTTA
ACCAACTGAT GACGAAGATA GTCTCGAGAG ATATAGGTCA ATTCAGTCGA TCTATGAGGA CACTCAAGAA GTGGAAGGAA AGGAAAAATT TTTTATCTCA AGTGAAGAAC CTTCGACCTA
TGCTTTGGCT GCGAAGGAGG AATTGTGGAG ACAAGCTATG AGAGAAGAGA TGGAAGCAAT TGGGAGAAAT TCAACATGAG AGTCAGTAAA GCCACCTAAT AGGTGCAAAC CGATAAGAGT
GAAGTGGGTT TATAGAGTCA AGAGGGACTC TACTGGTGAA GTGACAAGGT TTAACCTATG CCTTGTAGCT AAAGGGAACA TTCAAAAGAA GGGAGTTGAC TTGATGAAGT TTTCTCACCA
GTGGCAAGAG TGAAATCTAT TCAGATTCTC ATGGCACTAG CAGCACAATT CAAGAGGAGT CTACATCATC TTGATGTAAA ATCGGCATTC CTAAATGGTG AGATTAAGGA GGAGGTTTAT
GTGGCTCAAC TAGAAGGCTT TGTAAAGCAA GGCAAGGAGA ATTATGTGCT AAGATTGAAA AAGGCCCTTT ATGGGCTTAA ACAGGCTCCG AGGGCGGGGA ATTACAAGTT GGATGAAGAA
TTAACTAGAG TAGGATTCAA GAGAAGTGCA AGTGACCAGG CAGTGTATAT TTCAAGCATC AAATATCATA TATTACTGGT GGGTGTATAC GTAAATTATC TCATCATCAC AAGGTCAAGT
GCCGAAGAAA TTGAGAATTC TAAGTTCTCT ATGAAGACCC AATTTGATAT GACTAACTTC AATTTCCTCA ATTCATATTT AGGCATTGAA GTGATGCAAA GAAATTCTGA GATCAGACTA
TGTCAGACTC TAAGCGCTAA AGATAGTTGA TGCATTGATA ACAAATCTGC AATTGAAATT AGTAGAAATC TGGTTCATCA CAGAAGAACC AAGCATATTG ATGTGTGTTA TCATTTCATC
TGAAATTGCA TGGAAGAAAG GAAGGTGGAG CTAGGATATG TGTGTATGGA TGCCCATCTC GTAGATTTAT TCACAACATT GCTTGGAATT ATAAAATTCA CAAAGCTCCG TGGGAAAATT
GGGTGTTTTC AAGTGAAACA GGGCTCTGAT CAAGGAGGAG AATTAAGGAG TGATCCCAGC CGTTAGATCT TAATCTGATG GTATATTTAC TTTGAATATA GGTTATAATC TCAACCGTCT
GTGAGATCCC ATTATAACGA TGGAGATCAA GACAGGGGAA ATATGTGGGG CTCACGGTAG TTATAACCAT TTCTTTCCTT TCTCTTTCTT CCCCAAACTA TAAGTGTTCG ATGAAATGCT
CACTATGCGG CGGGCATGTG CGTGTGAAGT GTTTGAACTT GTGTGTGCGA TTCTAGCTTC AAGATTGATT CTTTCTTTAC GAGCACTTCT TGATTTCATC AAGCGATCAT TCCTTGAGAG
CCTTGTGCTT ACAAGGACGA TAGCCTGCAG ATGGGTGGTG ACAGCAATCT CTCGTCCATC AACCTGCGCA GCCCGAGGGC CTTCGACAAT GCCTACTACG TAAACCTCAA CTCCAGGCGG
GGACTCTTCC ACTCTGACCA AGAACTCTTC AACAATTGCG CTGCCGACTT CATTTTCTGC AGCTACGAGT CCTGTAGCTC TGACTTCTTC AGAGACTTTG TTGCCGCCAT GATCAAGATG
GGGAATACCA GCCCTCTCAC TGGCTCGAAT GGGAAAATCA GGAGGATCTG CAGCAGGATG AATTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTCGG CACTAAAGCA TATAGTGGCA AGAGTGAAAT CTATTCAGAT TCTCATGGCA CTAGCAGCAC AATTCAAGAG GAGTCTACAT CATCTTGATG TAAAATCGGC ATTCCTAAAT
GGTGAGATTA AGGAGGAGGT TTATGTGGCT CAACTAGAAG GCTTTGTAAA GCAAGGCAAG GAGAATTATG TGCTAAGATT GAAAAAGGCC CTTTATGGGC TTAAACAGGC TCCGAGGGCG
GGGAATTACA AGTTGGATGA AGAATTAACT AGACCTTGTG CTTACAAGGA CGATAGCCTG CAGATGGGTG GTGACAGCAA TCTCTCGTCC ATCAACCTGC GCAGCCCGAG GGCCTTCGAC
AATGCCTACT ACGTAAACCT CAACTCCAGG CGGGGACTCT TCCACTCTGA CCAAGAACTC TTCAACAATT GCGCTGCCGA CTTCATTTTC TGCAGCTACG AGTCCTGTAG CTCTGACTTC
TTCAGAGACT TTGTTGCCGC CATGATCAAG ATGGGGAATA CCAGCCCTCT CACTGGCTCG AATGGGAAAA TCAGGAGGAT CTGCAGCAGG ATGAATTGA
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Retrieve as FASTA
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