View Redoxidase 1888

Entry information : AtAPx02 (At3g09640 / APX1B / APX2)

Entry ID	1888
Creation	2006-09-04 (Christophe Dunand)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2015-12-15 (Christophe Dunand)

Peroxidase information: AtAPx02 (At3g09640 / APX1B / APX2)

Name (synonym)

AtAPx02 (At3g09640 / APX1B / APX2)

Class

Ascorbate peroxidase [Orthogroup: APx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

Cytosolic

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtAPx02 start..stop	S start..stop
AhalAPx07	502	0	1..251	1..251
AlyAPx02	496	0	1..251	1..251
CagraAPx02	490	6.97e-179	1..251	1..251
BstrAPx02	489	1.71e-178	1..251	1..251

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1888' 'join(2956301..2956422,2956524..2956698,2957050..2957115,2957258..2957306,2957387..2957469,2957546..2957625,2957717..2957819,2957909..2957967,2958145..2958163)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2956301..2956422	120	N° 2	2956524..2956698	173	N° 3	2957050..2957115	64	N° 4	2957258..2957306	47
N° 5	2957387..2957469	81	N° 6	2957546..2957625	78	N° 7	2957717..2957819	101	N° 8	2957909..2957967	57
N° 9	2958145..2958163	17
join(2956301..2956422,2956524..2956698,2957050..2957115,2957258..2957306,2957387 ..2957469,2957546..2957625,2957717..2957819,2957909..2957967,2958145..2958163)

Literature and cross-references AtAPx02 (At3g09640 / APX1B / APX2)

Protein ref.	UniProtKB: Q67XB1
DNA ref.	Phytozome 12: Chr3 (2956301..2958163)
mRNA ref.	GenBank: AK176908
Cluster/Prediction ref.	Phytozome Gene 12: 19660573 UniGene: At.129
Omic ref.	AtProteome: At3g09640 ATTED-II: At3g09640 e-FP Browser: At3g09640 ePlant: At3g09640 TAIR: At3g09640

Protein sequence: AtAPx02 (At3g09640 / APX1B / APX2)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	251
PWM (Da):	27859.48
PI (pH):	6.24

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVKKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRLLDPIKELFPILSYADFYLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYADEDAFFEDYTEAHLKLS
ELGFADKE

Retrieve as FASTA

Remarks

Complete sequence from 4 cDNAs, 2 ESTs, and 1 genomic sequence (chromo 3, 8 introns).

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

CGAAGCTGTG GAGAAGACCT CAGCTGCGAT CAAGGTTTTG AAACAGATCG GTGCTTATGA TGATGCTGAG AAGGCAAAGA ACAGCATTGG AATCCGTCCT GGTAAAGGTA AAATGAGGAA CCGTCGTTAC ATTTCTAGGA AAGGTCCTCT GGTGGTTTAT GGAACTGAAG GATCTAAGAT AGTTAAGGCG TTTAGAAACC TTCCTGGTGT TGAGCTTTGT CATGTGGAGA GGCTTAATTT GTTGAAGCTT GCTCCTGGTG GTCACCTTGG TCGGTTTGTG ATCTGGACCA AGTCTGCCTT TGAGAAGCTT GAGTCTATCT ATGGTTCGTT TGAGAAGCCA TCAGAGAAGA AGAAGGGGTA TGTGCTTCCT CGTGCAAAGA TGGTGAATGC TGATCTTGCC AGGATTATCA ATTCAGATGA GATTCAGAGT GTTGTGAATC CGATCAAGAA GGATGCGAAG AGGGCTGTTC TTAAGAAGAA TCCATTGAAG AATCTCAATG TGATGTTGAA GTTGAATCCT TATGCTAAGA CCGCGAAGAG GATGTCACTG TTAGCTGAAG CACAGAGAGT TAAGGCTAAG AAGGAGAAGC TCGCCAAGAA GAGGAAAACC GTTACCAAGG TAATCTCAAT ACTTGACTTG TTCTCTTATC AACCGTTTTT GGATTGTCTT TGTTTAGTTA CTGATTACAT TTTGATCTGT GGTTGCATTT CATTTGACTT AACTTATATT GCAATTGTTC TAATTGACTG AGTTTGTGTA TGTTAAGCTA TACAATAATC TGTTCCCCTC TGGTTTAGTC TATGACTATA GTAGTCTTTC TTTACTAGAT CTTACCTTTT CTGTTCTGAA TTGTGGTCTA GTAGTTTGTC TTGTAAATCT GTTGTGTACG ATTCTTTGTC TTGATATTGA TTTTAGGTTG AGCTATTAAG CAATTGAATC TCTTAGCACT TTCTTGTCCC TTGTGAAAAT TGTTCTTCAT ATGTCCTCTT TTCTAACTCC ACTTTGAAAT ATCTATTTTT CTTACATCAG GAGGAGGCGT TGGCAATCAA AGCAGCAGGC AAGTCGTGGT ACAAGACTAT GATCTCCGAC AGTGATTACA CCGAGTTTGA TAACTTCACC AAATGGCTCG GTGCTAGCCA GTAATAATCT CGTCTGCTTT GGAACACTTT CCATATTTTA GTCAAAAGAT TTTGGTTTTT TTAATCTGTT TTGTCTTTGG GTGTCTGGAT ATCAAGTTGA ATTATGAACA AGTTTCACTT TTTTACATCT CCATTTCTTA CTTCGCCTTT ATCAGTTTCA TTTATTTATC TCTTGCTCCT TCGTTTCCTA TGATGATGCT TGTTATGTTA TGAACCTACT TAAAAACAAG CTGAAGCTTT CTTTGGTTTA CCCCAGCAGA AACATTAATC AAGTTCAATT GATCAATATG TCGATTGATT TACTGTTTAA AGGCATAGTG TGTCTATCAA CCCTTAAGTC TTTTTGGTGG ATAGTGAAGC TCAAACCCAA TTCAAATGTC GATCAACCCT AACGTTTTTG TGCTCGATAG TAAAGCATGA GTATAAAAAG AACGTCGCTT CTTCCTACAA TCACACAGAT CATTTGAAGC TTTGATTAGT TGGTACAACA TACTCGAGGA ATACAGAATG ACACGTGGTG TGTATCTGTT GGATAAATTT GTATTATTCT TCTTTACTAT GGATGGTTTC TGGAAGGCGC GCCAAGAGTC CTTCTTTTTC CATCTACAAA TCATGACCGT CCATCTCCAA AAGAAGACTG AAACAGTGAA ACTAGAAGCT TCATTTTGAT CATCAGCCAG TTTTATAAAT TGATCCGTAT ACTAAAGTAA CAACTACTAG CACTTTCTTC TGTGATCGAT CATTGTGTTT AAACTAAAGG TTTGTATGTT CTTGTAATCT
TATTGATCTC GATAGGTTCT CCATTCTCTT TAGGTTTTAA AGCCTTCAAC GATTTCCAGA AGGAAGCGAA TTTGAAAAAA

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TCTGGAATCT GGTGTCATCT CCTACCTCCT TGATTCTTGT TCCCTCACAT TATTATTGTA ATCATAGAAA ATACTTTAAA AATTAAATGG AAGACATTGT ATTATACGTA TGCCTTGCGT TTTTTGTAAT TGTTAATTAA TGAAATAAGA GCACTTGCTT GCTGAAACTA AAAAACTCTT ACAACAATTC ATTACCTTCA TATAGTTTGA AGGCTAGTAA TCTCACAATG ATAAACTATA TTGAAAGTTG TGTTATCGTT GAAAAATTAA AATAATTTTT ATTTCTGTAT CTTCAATGAT GGTAAACAAA TGAAAGCTTC AAAGTTTATT TTTGTAAATT CGGAAAACGA ATGATATTAT TGTCTACAAT TTCTTCAAAT CATCATTATA ATTGTTTTGC TCTTTTGAAA AAATAAAATG GAGATATTAA TTTGCTTGAA CTCAAAACGA CGACGTAGCA CAACTCCTTT CCACTCGAAT AATCCATTTG GAGGCTTTTT TTCATTACAG AACACACACT CTCTCTCCAA TGGACCTAAA ATGAACATTC TCCGACCTCC GACGTCATCA TCATCTTCGT CGTTTCCTCC ATACCCAAAG CCCGTTTCAT TAACCCCTCC GGTATCTTTC ACTCTCATCC ACAACCCCAT AAACCTCTGC TCTATAAACC CACCATTCAC CAACGCTGGT CGACCAATTT TCCAACGGTC CGCCTCCGGC ACTGCTAATA GCTCCGCCGA AGACCTCTCG TCTTTCTTGG GCTCTCCCTC AGAGGCGTAT TCAACACACA ACGACCAAGA GCTTTTGTTT CTCCTCCGCA ATAGAAAAAC CGATGAAGCT TGGGCTAAGT ATGTTCAATC CACTCATCTC CCTGGACCAA CTTGTCTTAG CCGTTTAGTT TCTCAATTAT CTTATCAATC CAAACCCGAG AGTCTCACGC GCGCACAATC TATCCTCACG
CGCCTCCGCA ATGAACGCCA GCTGCATCGC CTTGACGCTA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTGAAGAAGAGTTACCCGGAAGTGAAAGAAGAGTACAAGAAAGCTGTTCAGAGATGCAAGAGGAAGCTCCGTGGTCTTATTGCCGAGAAGCACTGTGCTCCCATCGTCCTCCGTCTT
GCGCGTAAGATCCTCTCTCTGGTTCCAGTCTTTTCTGTTACTGTGAGTACTGAGTTGTTCGATTGATGGCTTCTCAGAGCATATTTTGTTGGCGGAAATTTGCAGATGGCACTCGGCTGG
GACATTTGATGTGAAGACGAAGACAGGAGGACCGTTTGGGACGATAAGGCATCCCCAAGAGCTAGCCCATGATGCCAACAATGGTCTTGATATTGCCGTTAGGCTTCTTGACCCTATCAA
GGAGCTGTTCCCTATTCTGTCATATGCTGACTTCTACCAGAGGTAAATTTTCAACAATGTACTGAGTTTTTTGACCTCTAATTGTGAAGCAAGGGATGCATCAAGCTGTAGTAAGTAGGA
ACTTGAGGTAGAACCATAGAATCAAGGGTTTTTTGATGCATCAGTGATTATACCGAGAGGGGAAACATTTGGAAGGGATTTTGTTGGTTGGTACAGCTAAGTTATGACTTAAAATGGGTT
CTTCTCTAGCTTGAGCCGTCGGCTATTGGCCCTCTGGTTTGTCTGCAGTGAACTAGATTCACACATGTTAGATTGATACTGAATCTAAAAGCTTACTTTGTATTTCGCATGGCTTTAAGG
GCTTGATTCATCTGTGTTTCTTGGTTACTGTAGCTAGCTGGAGTAGTTGCTGTTGAGATCACTGGAGGACCAGAGATTCCATTTCATCCTGGTAGACTGTGGTGAGTCAATATTCAACTT
CTCAGTTTTCTGGCTACCAATTATTAGCTATCTCTTCGTTTTAAAACGCAACTCACTGATGATGAGACACCACTGCTAAGTTTTTTGTTCATGTGATTAACTGAACCAAACTTCATCTTT
CAGGACAAAGTTGAGCCACCTCCTGAAGGTCGTCTGCCTCAGGCCACCAAAGAGGTAAAGCAGATATATGAAAATGAATTTAGCTTGAATTCAGGTATCAGATTGTAGATACATGTTCAT
AATCATAAATTCAGGTGTGGATCATCTAAGAGATGTGTTTGGTCGGATGGGACTCAATGACAAAGATATCGTTGCATTGTCTGGTGGACACACCTTGTGGTATGTATGCTGCATCCAGAA
ACAAAGACCTATGTGCTTTTCTCAGTTCTGGCTCACACCATTCTTTTACTTTCAGGGTCGGTGCCACAAGGAGCGTTCAGGATTCGAGGGTGCATGGACACCAAACCCGCTCATTTTTGA
CAACTCCTATTTCAAAAGTAAGATCAGATTCTCTGCTTCTGCTTGCTCATACTTGAATTGGACATGAGCTGAATTAGAAGCTCTTGAATCTTGATGGTTGTTAAACAGAGAGATACTAAG
CGGAGAGAAAGAAGGACTTCTTCAACTACCAACCGACAAGGCTCTTCTTGATGATCCTCTCTTTCTCCCATTTGTTGAAAAATATGCTGCACAGTAAGTTGTTCAACTCATCATTCCATG
ATTCTCTCAGCATACATATATTGTCAATAGGATAATATCACTGACTGGATTGTTACTCTCAGGATGAGGATGCCTTCTTCGAAGACTATACGGAAGCTCATCTAAAGTTGTCAGAACTCG
GGGGTAAGTAACATATAGAACAATCATTCTCATCAACATTTTATTTAACTTTCTTTCCTATTCTCCTAATGTAGTGTCGTAAACTTTGAATGGTCCTCAGAAACTCACAAAAACTTTTCA
TTTGCAAACACTTTGATCATAATAACATAACTTACGCTCATGTCATCATGTCCTTTGCAGGTTTGCTGACAAGGAGTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTGAAGAAGAGTTACCCGGAAGTGAAAGAAGAGTACAAGAAAGCTGTTCAGAGATGCAAGAGGAAGCTCCGTGGTCTTATTGCCGAGAAGCACTGTGCTCCCATCGTCCTCCGTCTT
GCATGGCACTCGGCTGGGACATTTGATGTGAAGACGAAGACAGGAGGACCGTTTGGGACGATAAGGCATCCCCAAGAGCTAGCCCATGATGCCAACAATGGTCTTGATATTGCCGTTAGG
CTTCTTGACCCTATCAAGGAGCTGTTCCCTATTCTGTCATATGCTGACTTCTACCAGCTAGCTGGAGTAGTTGCTGTTGAGATCACTGGAGGACCAGAGATTCCATTTCATCCTGGTAGA
CTGGACAAAGTTGAGCCACCTCCTGAAGGTCGTCTGCCTCAGGCCACCAAAGGTGTGGATCATCTAAGAGATGTGTTTGGTCGGATGGGACTCAATGACAAAGATATCGTTGCATTGTCT
GGTGGACACACCTTGGGTCGGTGCCACAAGGAGCGTTCAGGATTCGAGGGTGCATGGACACCAAACCCGCTCATTTTTGACAACTCCTATTTCAAAGAGATACTAAGCGGAGAGAAAGAA
GGACTTCTTCAACTACCAACCGACAAGGCTCTTCTTGATGATCCTCTCTTTCTCCCATTTGTTGAAAAATATGCTGCAGATGAGGATGCCTTCTTCGAAGACTATACGGAAGCTCATCTA
AAGTTGTCAGAACTCGGGTTTGCTGACAAGGAGTAA

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ACTAGCACTT TCTTCTGTGA TCGATCATTG TGTTTAAACT AAAGGTTTGT ATGTTCTTGT AATCTTATTG ATCTCGATAG GTTCTCCATT CTCTTTAGGT TTTAAAGCCT TCAACGATTT CCAGAAGGAA GCGAATTTGA AAAAAATGGT GAAGAAGAGT TACCCGGAAG TGAAAGAAGA GTACAAGAAA GCTGTTCAGA GATGCAAGAG GAAGCTCCGT GGTCTTATTG CCGAGAAGCA CTGTGCTCCC ATCGTCCTCC GTCTTGCATG GCACTCGGCT GGGACATTTG ATGTGAAGAC GAAGACAGGA GGACCGTTTG GGACGATAAG GCATCCCCAA GAGCTAGCCC ATGATGCCAA CAATGGTCTT GATATTGCCG TTAGGCTTCT TGACCCTATC AAGGAGCTGT TCCCTATTCT GTCATATGCT GACTTCTACC AGCTAGCTGG AGTAGTTGCT GTTGAGATCA CTGGAGGACC AGAGATTCCA TTTCATCCTG GTAGACTGGA CAAAGTTGAG CCACCTCCTG AAGGTCGTCT GCCTCAGGCC ACCAAAGGTG TGGATCATCT AAGAGATGTG TTTGGTCGGA TGGGACTCAA TGACAAAGAT ATCGTTGCAT TGTCTGGTGG ACACACCTTG GGTCGGTGCC ACAAGGAGCG TTCAGGATTC GAGGGTGCAT GGACACCAAA CCCGCTCATT TTTGACAACT CCTATTTCAA AGAGATACTA AGCGGAGAGA AAGAAGGACT TCTTCAACTA CCAACCGACA AGGCTCTTCT TGATGATCCT CTCTTTCTCC CATTTGTTGA AAAATATGCT GCAGATGAGG ATGCCTTCTT CGAAGACTAT ACGGAAGCTC ATCTAAAGTT GTCAGAACTC GGGTTTGCTG ACAAGGAGTA ATCTGGAATC TGGTGTCATC TCCTACCTCC TTGATTCTTG TTCCCTCACA TTATTATTGT
AATCATAGAA AATACTTTAA AAATTAAATG GAAGACATTG TATTATACGT ATGCCTTGCG TTTTTTGTAA TTGTTAATTA ATGAAATAAG AGCACTTGCT TGCTG

Retrieve as FASTA