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Entry information : AlyAPx02
Entry ID 7517
Creation 2010-08-10 (Christophe Dunand)
Last sequence changes 2010-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-24 (Marie Brette (Scipio))
Peroxidase information: AlyAPx02
Name AlyAPx02
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis lyrata    [TaxId: 59689 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AlyAPx02
start..stop		 S start..stop
AhalAPx07 503 0 1..251 1..251
AtAPx02 496 0 1..251 1..251
CagraAPx02 495 1.02e-180 1..251 1..251
BstrAPx02 491 3.61e-179 1..251 1..251
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7517' 'join(3816763..3816884,3817011..3817185,3817490..3817555,3817724..3817772,3817861..3817943,3818021..3818100,3818192..3818294,3818384..3818442,3818592..3818610)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3816763..3816884 120 N° 2 3817011..3817185 173 N° 3 3817490..3817555 64 N° 4 3817724..3817772 47
N° 5 3817861..3817943 81 N° 6 3818021..3818100 78 N° 7 3818192..3818294 101 N° 8 3818384..3818442 57
N° 9 3818592..3818610 17  
join(3816763..3816884,3817011..3817185,3817490..3817555,3817724..3817772,3817861 ..3817943,3818021..3818100,3818192..3818294,3818384..3818442,3818592..3818610)


exon

Literature and cross-references AlyAPx02
DNA ref. Phytozome 12:   scaffold_3 (3816763..3818610)
Protein sequence: AlyAPx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   251
PWM (Da):   %s   28032.55  
PI (pH):   %s   6.43
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVNKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHEANNGLDIAIRLLEPIKELFPILSYADFYLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFSRMGLNDKDIVALSGGHTGRCHKERSGFEGAWTQNPLIFDNSYFKEILSGEKEGLLQLPSDKALLDDPLFRPFVERYADEDAFFEDYKEAHLKLS
ELGFADKE

Retrieve as FASTA  
Remarks complete sequence from genomic (chromo 3, 8 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGAATAAGAGTTACCCGGAAGTGAAAGAAGAGTACAAGAAAGCTGTTCAGAGATGCAAGAGGAAGCTCCGTGGTCTTATCGCCGAGAAGCACTGTGCTCCTATCGTTCTCCGTCTT
GCGCGTAAGATCCTCTCTCTGGTTCCAGTCTCTTCTGTTTCTGAATAGTAGTTCCTTTTCGTTTGCTTATGAGTGTTGATGCGTTTGTGAGTTGTCTCTGAGAGTTTCTTTTTGCTGGGA
AAATTTGAAGATGGCACTCGGCTGGGACATTTGACGTGAAGACGAAGACAGGAGGACCGTTTGGAACGATAAGGCATCCCCAAGAGCTAGCCCATGAGGCCAACAATGGTCTTGATATAG
CAATTAGGCTTCTTGAGCCGATCAAGGAGCTGTTCCCCATTCTGTCTTATGCTGATTTCTACCAGAGGTAAAGTTTCAACATTGTGCTGAGTTTTTTAGCTGTAATACTGAAGCAAGGGA
TGCATCAAACTGTAGTAACTACTGGATTGAGGTAGAACCATAGACTCAAGGGTTTAGGGATGCCTGATCAATGATTGTAACTTCCAAATGTAGTAATTACGAGCTTGAAGTGATTTTGTT
GGTAATAACCGCTAAGTTATGACCTAAAAAGGTTCAGCTGTCTGCTATTGGCCCTCTGGTTTTTGAACTACATTCACACAACTGAATCTAAAAGCTTACCTTGTATTTCCCATATTTTTT
GGTTACTGTAGCTAGCTGGAGTTGTTGCTGTTGAGATCACTGGAGGACCCGAGATTCCATTCCATCCTGGTAGACTGTGGTGAGTCAATATTCAAATTCTCAGTTTTCTGGCTACCAATT
CTTTGCTTCATCTCTTCGATTCGCAATTTCTTCGATTTAAATCACAACTCACTGATGATGGTCTGATACAGACACCACTGCTAAGTTTTGTTCATGTGATTAACTTAAACCAAACTTCAT
CTTTCAGGACAAAGTTGAGCCACCTCCTGAAGGTCGTCTGCCTCAGGCCACCAAAGAGGTAAAGCAGATCTTAGAAAATGCATTTAGTATTGAATTCGGGTAACAGATATAGATACATGT
TCATAATCTGTTTTATTGTCATCCAGGCGTGGATCATCTAAGAGATGTGTTTAGTCGGATGGGACTCAATGACAAAGATATTGTTGCATTGTCTGGTGGACACACCTTGTGGTATGTATG
CTGCATCCAAAAACAAAGACTTATGAGCTTTTCCCCAGTTTTGGCTCATACCATTCATATACTTTCAGGGTCGGTGCCACAAGGAGCGCTCAGGATTCGAGGGAGCATGGACACAAAACC
CGCTCATTTTCGACAACTCCTATTTCAAAAGTAAGATCAGATTCTCTGCTTCTGCTTGCTCATACTTGAATTGGACCAGAGCTGAATCAGAAGCTCTTGAATCTTGATGGTTGTTAAACA
GAGAGATACTAAGCGGAGAGAAAGAAGGACTTCTTCAATTACCAAGCGACAAGGCTCTTCTCGATGATCCTCTCTTTCGTCCCTTTGTTGAGAGATATGCGGCACAGTAAGTTATTCAAC
TCATCATTTCATGATTCTCATTCGTCATACATATATGTCAATAGGATATATCACAGACTCGATTGTTACTCTCAGGATGAGGATGCCTTCTTCGAAGACTATAAAGAAGCTCATCTGAAG
TTGTCAGAACTCGGGGGTAAATAACACATAAAACAATCTCTCTCTCAACATTTTGTTTTAACTTTTTTCTTATTGTCCTACTCCTAGTCGTAAACTTCGATTGTTCCTCAGAAACTTTTC
AATTACAAACAGATTTTGTCTAAACCAGATATAATCACTAAACAGGTTTGCTGACAAGGAGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGAATAAGAGTTACCCGGAAGTGAAAGAAGAGTACAAGAAAGCTGTTCAGAGATGCAAGAGGAAGCTCCGTGGTCTTATCGCCGAGAAGCACTGTGCTCCTATCGTTCTCCGTCTT
GCATGGCACTCGGCTGGGACATTTGACGTGAAGACGAAGACAGGAGGACCGTTTGGAACGATAAGGCATCCCCAAGAGCTAGCCCATGAGGCCAACAATGGTCTTGATATAGCAATTAGG
CTTCTTGAGCCGATCAAGGAGCTGTTCCCCATTCTGTCTTATGCTGATTTCTACCAGCTAGCTGGAGTTGTTGCTGTTGAGATCACTGGAGGACCCGAGATTCCATTCCATCCTGGTAGA
CTGGACAAAGTTGAGCCACCTCCTGAAGGTCGTCTGCCTCAGGCCACCAAAGGCGTGGATCATCTAAGAGATGTGTTTAGTCGGATGGGACTCAATGACAAAGATATTGTTGCATTGTCT
GGTGGACACACCTTGGGTCGGTGCCACAAGGAGCGCTCAGGATTCGAGGGAGCATGGACACAAAACCCGCTCATTTTCGACAACTCCTATTTCAAAGAGATACTAAGCGGAGAGAAAGAA
GGACTTCTTCAATTACCAAGCGACAAGGCTCTTCTCGATGATCCTCTCTTTCGTCCCTTTGTTGAGAGATATGCGGCAGATGAGGATGCCTTCTTCGAAGACTATAAAGAAGCTCATCTG
AAGTTGTCAGAACTCGGGTTTGCTGACAAGGAGTAA

Retrieve as FASTA