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Entry information : BrPrxII03_other (BrPrxIIC)
Entry ID 4339
Creation 2007-01-31 (Christophe Dunand)
Last sequence changes 2007-01-31 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2008-11-26 (Christophe Dunand)
Peroxidase information: BrPrxII03_other (BrPrxIIC)
Name (synonym) BrPrxII03_other (BrPrxIIC)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue types Etiolated seedlings
Roots
Seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrxII03_other
start..stop		 S start..stop
AtPrxII02 321 9.02e-115 1..162 1..162
AlyPrxII02 319 2.73e-114 1..162 1..162
AtPrxII03 314 3.13e-112 1..162 1..162
AlyPrxII03 313 1.08e-111 1..162 1..162
Literature and cross-references BrPrxII03_other (BrPrxIIC)
Literature Choi Y.O., Cheong N.E., Lee K.O., Jung B.G., Hong C.H., Jeong J.H., Chi Y.H., Kim K., Cho M.J., Lee S.Y. Cloning and expression of a new isotype of the peroxiredoxin gene of Chinese cabbage and its comparison to 2Cys-peroxiredoxin isolated from the same plant.
Biochem. Biophys. Res. Commun. 258:768-771(1999).
Protein ref. UniProtKB:   Q9XF72
mRNA ref. GenBank:   AF133302
Protein sequence: BrPrxII03_other (BrPrxIIC)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   162
PWM (Da):   %s   17307.97  
PI (pH):   %s   5.26
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPIAVGDVV PDGSISFFDE NDQLQTVSVH SLAAGKKVIL FGVPGAFTPT CSMKHVPGFI EKAEELKSKG VDEIICFSVN DPFVMKAWGK TYPENKHVKF VADGSGEYTK LLGLELDLKD 
KGLGVRSRRF ALLIDNLKVT VANVESGGEF TVSSADDILK AL 

Retrieve as FASTA  
Remarks Complete sequence from 1 cDNA and 8 ESTs (ssp. pekinensis: CV432742, CV432754, CV544917, CV545713, BG543590, BG544772 other: DY013406, CX272345, CX266368, DQ296178). Two identical TREMBL accessions Q9XF72 and Q2V612.