Entry information : Hs1CysPrx01 (PrxVI)
Entry ID 4426
Creation 2007-01-25 (Nicolas Rouhier)
Last sequence changes 2010-12-03 (Myriam Duval (Scipio))
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2010-12-03 (Myriam Duval (Scipio))
Peroxidase information: Hs1CysPrx01 (PrxVI)
Name (synonym) Hs1CysPrx01 (PrxVI)
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Homo
Organism Homo sapiens (human)    [TaxId: 9606 ]
Cellular localisation N/D
Tissue type Mixed tissues
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Hs1CysPrx01
start..stop
S start..stop
Ptro1CysPrx01-2 456 3.32e-166 1..224 1..224
Ptro1CysPrx01 456 3.32e-166 1..224 1..224
Pabe1CysPrx01 456 3.32e-166 1..224 1..224
Ggo1CysPrx01 456 3.32e-166 1..224 1..224
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4426' 'join(173446537..173446631,173450465..173450621,173454500..173454646,173455394..173455540,173456874..173457002)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 173446537..173446631 93 N° 2 173450465..173450621 155 N° 3 173454500..173454646 145 N° 4 173455394..173455540 145
N° 5 173456874..173457002 127  
join(173446537..173446631,173450465..173450621,173454500..173454646,173455394..1 73455540,173456874..173457002)


exon

Literature and cross-references Hs1CysPrx01 (PrxVI)
Literature Frank S., Munz B., Werner S. The human homologue of a bovine non-selenium glutathione peroxidase is a novel keratinocyte growth factor-regulated gene. Oncogene 14:915-921(1997).
Protein ref. UniProtKB:   P30041
DNA ref. GenBank:   NC_000001.1 (173446537..173457002)
mRNA ref. GenBank:   AAH35857
Cluster/Prediction ref. UniGene:   Hs.573688
Protein sequence: Hs1CysPrx01 (PrxVI)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   224
PWM (Da):   %s   24922.14 Transmb domain:   %s   i7-29o
PI (pH):   %s   6.29
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAE
KDEKGMPVTARV
VFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYLRYTPQP*

Retrieve as FASTA  
Remarks Genomic DNA (Chromo 1, 4 introns), 21 mRNA and 1054 ESTs.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGGAGGTCTGCTTCTCGGGGACGTGGCTCCCAACTTTGAGGCCAATACCACCGTCGGCCGCATCCGTTTCCACGACTTTCTGGGAGACTCTCGTAAGTGGCCACCGCGTAGCCCT
GTCCTGGCCTCGGTTGCGCCGGACTCGGAGGTGCCTTCCCTGTTTCTTCTCCCTGCCGTCCTCCCGGCCGCTCAGCCCCCTGCGCCGCCCTCGCCTTCCCCCGCACTGGTTCCGGCGCGC
GCCAGGCCGTGTGGCCTCTGCTCAGCGTCGGCTGCGCTGCTGGGAGCTGGCACCCGTTCGGCCTGCCCTGCGCGGGCCACTCGATCCCTCCTGGCCTCCCCGCCTCCGGCGTGGCTGGGC
AAGGCCACGCCAAGGTGGGGGGTGGGGAGGATAAAATTGTGTTCTGCGGGTTCTGGAAACTCACCGCCCGCGGGAGGGTTTGTTGTCCATTTAACTCGTCTTAGTAAACTGTGCAGGTAG
CGTGGTCAGGCCGAGGGCGCAGGGGCGGGGCGGCATTGACGATCACTTCCCCGGACTAGTGCCCAGGGTCGCACCGCCCTCCCACCCTCCGTTCTGGAATTTGCTCCCTGGGGAGGATGG
GTGTCTAAAGCCAAAGTCGGAGGACACAGCTGCTGGCTATAGGTTACAGGAAGGCCAACGTATCATCTGAGGGTGCAGTGGTATTTGCAGGCTTCTGGGCACAAAATGTGAAATTTAAAA
CCACTAGCTGCCAAGTAGGTGGCCGAAAGACTTTTTGTCCAGAGCCGCCTCCAATGGCCAAGATATGATTTGATAACAGCTTTAGGAAGAGCCAAGAACACTCTGCGTAGGTGTGCCTTC
AGAGATTCCAGAACTTGCAACACTTGGAGGGAAGGACTTTCTGACGCTGTTCCGCTGGAGTGGCCTATTCTTGCTAGTGATGGCCGTTCCAGGCTCCAGGACACGTGTACTCCCCAACTT
TGAGACTCTCTTGTTTTCCAGTGGCTTGCCCCTCACTGTCCCCTCCGCTTTCTACCTTGCTTCTAGCACATGAGCTTGCTGATGATAGCCAAATTGATGACCTGTGATCTGACTTGGCAG
TTTTACCATTATGGATAGGAGTAGTAAATCGGTGTTGCCCTTTTTTTTTTTTAACAGCTCCTGAATCAGCAAACTGGAAGTTGCTTAGTTTTCATCAGAAGCATTCCAGGCATGTCTAGT
TATATTATGGTTCTGGAGTACTAGTGGTCCCACTACACTGTGGGGCTCCAAGGCTTGACAACAGTTCTTCCCCAGATTATATCCTTTTTATATACAGTATCCAGGGAGACAGGCTTATGA
AATTAATCAGTGATTGGACAGGGCTGTGCAGAGAACCAGGGACAGATTCTTACACATCATATGCCTATCCAACCCTTTATAACCTCTTAAGTCCCTTTTCCAGCCACTGAATAGGGAAAA
GTTAAGCTTTGTGAAAGATAGGACTAGGCCAGAAAAAGGTTGAGAAATGGAATATTCAAACCTTGAATGCAGAAAAATACTTTAGAAATACAGCTTATGGCCATTCTTATACTTAGGATC
TAGGTAGTAATATTTCTCCAGCAATCCTTGGGATTTTTAGAGTTGTGTTCCTTCCCATTTCTACCTGCAGCCCTCATCCCCCATCCCCATGAAACATAAACTATTTCCAGAACTCTTAGC
TTGTATAGATTAAATATTAGCATAAAACGTATTTACTGTGCCAACAGTTATAAATGCTGTCACTTTTTAAGCTAACCATACTTTTTTGGGGTTTTGTTAATGTTTATTGGCCTCTAGATC
CATCTAGATTTGATCAAAAGTGGTACTTTATCAGGGAGCCATAGTTAGGAACACGGTAGAAATATCTGCATTTATTAACTAATATACAAGTCTGCCTAGGATCAGGTATAGTATTCCCTA
CCTTACCGGGAAGAGAAGTTTGAGCCTTTTATATGTTTATAACACATGGATTTTTGCCTGATTTTTCCAATTTTCTATTCTGTATATGATCCCAAATCAGACTGTCAATTTTTGATCCAG
GTATTTTTGAGAAGAAAAAATTAAAATGTATTTCTCTACCTTACCCCTGATCATTGTAAACAACTAAAGAGGTTGGGTGCTACATTGGGTGAGTTTACCTTATCGCTGTTTCTTTAAGTG
GTAGAAGCAGCTTCTTCATAGTACATCTTCACTAAGCAAAATATGTGTTTTCCAGGGGTCTTCTGGGGCTTAGTAAGTGGGAACCATTCTCTTGAAGGAGGAAACCTTTTGTCTTTTGAA
AATGGGTAAGAAAATGGGAGCATGTCACTGAATTACTCTTAAGTGCAGCAGTAGGAAGACTTGGAGGGGAAGGAAGGCCAAGGTAAGACATTCTTGGAGTTTATCCTATTTGTAGCCATG
AGGTAAACTGGAGTTTCACTTCTGAGGGAGGGAAGGACGTGAACTGGCTTAAAACCAGTTCCTTTTGCATGATTCAGCAAAACAGTCTTTATGGACTCACAGTGGAAAAAGAACTCCTAA
CTTTTCTAATTTATCCTCCTTTTAACGATAGAGGAGGAAACGCCCTGTTCCATTTCTTCTCAACTTCTGGAGACCTTCTGTTAAGTCTCATCTAACCATTAAATAGATCGTTTTCCATAG
AATCTAAGGCCTAGATTTTACTCATAGTGATATTATCTACTTCAAAAGATATACTCTATGTTCTTCCTTTTGCCCTTCATAGTAAAGTGAACATAGTGCACACCTCCACAATCTTAAAAA
AAAATACTAACTTTCCTCCCAGTCTTGCCATAGGGCCCTCCATCCTTTTTGTAAGAAGATCTTTTTCCTTCTTGAAACCTTGGGAGTTGAGTGGCAGCCGTAAGTAGGAAGGAGGTGCCC
TTGTCTTTGCTTGTTCTCTGTGCTCAGGGAAACTTCAGAAAGGTCAACTTGGCATCTAGGCTAGATTTAGTTATCTACTAGTTTAGGATCCTGCCTAAATCATCTGGTTTAGGATGGTTT
AAGTTGATGGGGATGTGGAGAACTGAGTGTTAAATTTTCCTTTTCAGTTGAAAGAGTAGTTTCTGTTGCCAAGAAGAAGGAAATGGTACTTCAGCTTTCTTCGTGACAGCTTGAAATGTG
CTCAAAATTATAAAATCTTAGACAATGATGACTTAGATATTAGTATTTACCTAAGAATTTGCTGTTGTAGAAATCTACATTGCAGGCTATCAAAATTCTACCTGCTTGGTCTGAAGAAAG
AAGAAAAAGAAACTGCAAATGAAGAGATAGGTAAAACTGTGAAGGTGCTATTGTTTTGTCAGAGTATAAATATTGGGTGTCATGTTTGGCAGGTAAGATCAGTAAAGTGGTTTTACAAAA
GATTTTATATCCACTTGCTTCAGAGAAGCCAAGTGTCAACTTTAATTTTTACATATAAATAGAAGATAGAAACCTATTTATTTCAGATTACATAATTTGTTTATTATTGCAGTCAGGCAT
TTGTTTGGATTCAGGGCATACTGGGACATCCATTATTGGAGCTGAATGTCAGGGTCTATGCTAGAAAAAAATGTAGAAAAGGATAAGAAGAAATAATTAAGTGTTTTCAGTGAACTACTT
GGCTTGAATAGCACAGATTGTATTAGCCAAAAAGGAGTCAGGGTGGCACCATAATTATTAAAGGAGGCAACACCTTAACATTAGTCTTTTTAAATATGTGTCATCTTGAATTTCATGTCT
TTGATTGAATTGGGCTATAAGCATAGGCTTCTCTGGAGGTAAGTAGATTGAAAAGCACTCCTCAACAGAAAAGCTTAAAAGTAAATATCATCATAAGCATTCATTTAAAAAAGAAAGCCT
GTTTTTGATCCAGAAGTTGTGACTTTTCATTCTCTGTGATGTTGGTGATAACTCTTAATTCAATTGTGACCTTGTTTTTCTTCCTTTCAGATGGGGCATTCTCTTCTCCCACCCTCGGGA
CTTTACCCCAGTGTGCACCACAGAGCTTGGCAGAGCTGCAAAGCTGGCACCAGAATTTGCCAAGAGGAATGTTAAGTTGATTGCCCTTTCAATAGACAGTGTTGAGGACCATCTTGCCTG
GAGCAAG
AGGTTAGTATCAATTGGCATGTGCTTTGAGCCTGAGATTATAGGTCAAGTTATAAATTATGGAGTACTTGGTTTTGAGGTTAAGGTACAAGTAAGCCTTAGGTTCAAAGTTCA
CTAATTATTTGAAAATTTCAGTTGAACCACACAGTGATCACATTGCTAAATCCATTGGTCAGTCAATTCTCAGCCCTCCTCTTGGCCTGCCAGCAGCATTCAACCCAGCTGATCACTGTA
CCTCCTGAAACTTTTTCCTTTCTTGACTTCCAGGACACCACATTCTAGCTGTTCCTGCTCACTGATTCTTCATCTCCCAACTCCTAATTTATGCTGAAGTTACCCTGAACTTATTTCTTG
GACCTCATCTCTTTTCTGTCTGCACTCTTTCCCTTGGTGAGCTCATCCACTCACCTTTAAATACCATCTATGTGCTGTGATTCTCAAATTTTCATCTCTATGCCAGACTCTTCCAGGTTC
ATATAACCACTGCCTACCTAGCATCTCTCCTGGGATGTCCAGTCATCTCAAACCTAGCATGTCTAACTAGGCCTCATTCTTAGATCCAGAGTTTTACTCATCTAAGCTAATGGCAACTAC
ATTTTTATAGTTGTTCACACCCCAAATCCAGGAGCCATTCTGAATTCTTCATGTTTTTTCACATCATACATCTGATTTATCCTCAAACTTGTCAGCTCTACCTTCAAAATATGTCCTGTA
TCATAGATAGAAGACTCACTTCCCAGGGATCTGTGTGACTTACCCTCACCTCTTTTGGGTCTCAACTCACAGGACATTTCATCAAAGCCTTTCTTGTCCTCATTATCTAAAATTATAACT
CCTTTTCACGTTCACCATCCCCTTCTCCTCAGCACTCTGCATACTACCTATTTAGTTTGTTTGTTTCTTCCTAGTAGAGTATAAACTCAGCAGGAACAGAGACTCCTGTTTAGTGCACTG
CTGGAACAATGCTCACTACTCAGTATATCCTAGGCGATCAGTCAATATTTGTTGAATGAATTAACTGAAGGAAATACCTACTTCTAGCAAAAGAATTTACTTGAACAGTAAATTTGGTGG
TCTGAATTTACCTTGAAAACATTTTAAGAACTTGACTGCACTGTGCTGTTAAGTAATAATGATAACTACTTTTTGAGGGATGTATACTAGAAACTATGTCAAACGTGCAGTTGAATAAAA
GATGTATTGACTTGTGAGTTAGGGGTCTGTGGCTGCATCCTATAGCAGTTAATGCCAGTTAATCCTAAATATCTGAGACTAGAAGAATCATGTGTAGGAGAAAAAAGAAGGGCAGTTATC
TGTCTTGAAGTAGAATTTTTTTTCATTCCTTACACTTCTCAGTGAGTGGTAACTGTAGTTTTTGCTATCATTTTTCATTTTCGTTTTTGCAGTTGAACATACTTTTTTCACTCAGAGAGT
TGGAGGGACTTGCCCAAGACTGCCCAATGGCAATGAGATTTCAACCTCAAATCAATGTTCTTTTTAATGCAAGATGATAAAGAGTAGGATTTAGCCTAATTTAGGATAGAATAAAGCCAA
ATAATTTAGGATAGGTTCTTTGGTGTTCATGGGTGTAATCTAATGCCCATGATGCAAGTGGCAGAGTAGAGAATTAGTGCACAGCAATAATTAAAGTGACATATTGCCAAAGGAAGCGGT
TATAGCCCATTATATAATACCTTTTAAAGGACAGACGCATACTCAGGTTTATTTTACCTGCTGAGCTTCTGCCTTAGAAGTTTTCAGAATTGTGATTACATTGAATAGGAAAAAAGTCTG
AACTATCAGAAGCAGTGCCGCAACTTTGACAAACAACTGATTATATAATAATCTGCCTCTAGCATGAGACTATATTAATTATTATTTAGCTCTGGTGACTTCATAAGCAGCCAGTGACAA
CAGAAAGTTAAGATAATAAAATGAAGGAATGTTACAATTTGTTATCATCCGGGAGCCTGAGGCAGGAGAATGGCTTGAACCCGAGAGGTGGAGGCTGCAGTGAGCTGAGATCGCGCCACT
GCACTCCAGCCTGGGCAACAGAGACTCCACCTCAAAAAAATAAATAAATAAAAAGAATTTGTTGTTATCCACTTCAGAGCTCATTAATGCCACATTTGTCACATCTCCGTTGAGAAATCC
ACAATGGTTTTGTATCTGCTATGCCATCAAGCCCCTGTTTTACTTTCAAGCCTACACACAATAGACGTTATTCCAATTTTAAATCCTCTTTTCCATTACTTGCTAAACTCTATCCAACTA
AGTTCCTCACTCTCCTATCAATAGTTTATGTACAGAGTTGCCCACATGTTTCATTAATATCGTTCCTGGCCGGGCACAGTGGCTCTCGCCTGTAATCCCAACACTCTGGGAGGCTGAGGC
AGGTGGATCACAAGGTTAGGAGTTCAAGGCCAGCCTGGCCAAGATGGCGAAACCCCGTTTCTACTAAAAATACAAAAAAAAATTAGCCGGTGTGGTGGCGGGTGCCTGTAATCCCAGCTA
TTCAGGAGGCTGAGGCAGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGGTTGCGGTGAGCCAAGTTCGCACCAGTGCACTCCAGCCTGGGCGACAGCAAGACTCTGT
CTCAAAAAAAAAAAAAAAAAAAAATTAGATATATATATTTATATATATATATATTTATATATATACACACACACACACATACATATATATACATATGCACACGTATATAATATATATACA
CATATATATATGTGTGTGTGCATATATATATATAGTTCCTGATTCCTAGAATGCCTTTCTTTTCTCTGTGAAAAATCTTACCCATCCTTCAAGGGCCTAGATAGAAGTCCTGTTCTTTTC
TTGAAGCCTTTTGTAACTTTTGGAGTCCTACAAATGGGAGTGTTCGTATACTTCAGTATTTACCATCCACCATTTAACATTAGTCTTGCATTTGCTGCTGCTTCATACTGGAATCATCTC
TAACCAAATGAGAAGTTCCTTTGAAGGGAGGAGCCGTGTCTTACTCATCTGTATTCCACATGTATTTACCATAATGCTTAGCCCACCTTAAGTGCTATATCAATGCTTAATCAAATAACA
AAACTAGATTTTTTTTTTCTCCAAAAGCTTCCAGGGATAGGAAAAGTAGAAATAAATGGATGAATAAAGTTTTACTAGGGAAGGAGGGAAGTGTATCATTTTTCTTTAGTTCAGACTTGA
AATGCTTTGTTTTCTCTTTGAATTTCACCCTAGTTTAGGTTTACTTCTGCCTCTTCACCCATTTATTTTTGACTTGTCCTTCAAGTATATATTCAACTCTCCATTCTTGTGTTTGCTTTG
TTTTGTGATTTGTTTTTTTTTTTTTTGGTCATTTCTTATTTGTCTTGTAACTTAGCATCTGAGTCAGGGTGCTTTATGAGGTAGGGACCAGATCTATAAGATTTTCTTTACATATGGCAT
TATTTCTAGATGTGATGGATTTAACAAACCTATTGTTATCTGATGATTTTTACAGTATTTGGGTACCCAGAGGTACCTTGTATTTGGATCTAACTAAATTATTGCAATTTTAAAGGGGTT
GCTGCTATTTTCTCATAGCAGTAAAAGCATGCTGAATTTAAGAGAACTGGGCATGAAAACAGCTTTGGTCCATGATTACAACCTAAGTACTGTACTCTGCTGTTATTCCTGGCAATAATT
GGAATGAAGAGTGTTCATCTACTCACTTTTTAAAATTAAAATTGCTTAAAGAAAATTACTGTGATTTGGTCCTCTTTCCTGTCTTGCAAGGTGATGGCTGTTAACTGATGAAATTCAGAG
CATGTGTTGGGTTTAGATTCCTCTTTCCCCTTTTACTTGTGTTTCAGGATATCAATGCTTACAATTGTGAAGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATAGGAATCGGG
AGCTTGCCATCCTGTTGGGCATGCTGGATCCAGCAGAGAAGGATGAAAAGGGCATGCCTGTGACAGCTCGTGTG
TGGTAGGTCATACAAATTCATTTTGTAGTTAGCTTAACTGATCAGG
CTGTATGTCCGTGTAAATGCTGGTACCAGCTAGAGGAGATAGGGGAATATCTACGATTATGAAATAACTGTGTATTGGCGACAATATCACTGATTATCTGTAATGCTGATGCAATTTTCA
GCTAAATTTTCCAACTGCTTTATTCATAGTTCATGGAAATCTACAAAAAAAAAGTTGTTTATCCTAAAATGTCTTCCAGAATTGAGAAACCTTTTCATAGCTCTCCTGACTGCTCTCCTG
ACCGCCCTGTCTTTAAAGTGATGGGCCATATCCTTCTTCATAAGGCAGCTCTGTTTTAAATTTTTATTTGTTCTGTCCTCCGCCCACTAGAAAACAAACCCAATCCCTCATCTGAATAAA
TGCACAACTATTCAAGGAACAATATCAACTCCCATTAGTATTATTTTTATGATAGTCATCCCCAATTGACACAGCCTTTCCCTCGATTAAATTTGCATATCAGTTTTTCTTACTGGGAAA
GCCAGAACCAAATAGAATTCCCTTCTACGTTTAGAAAATAACAGGGAGAAGAAAATTATCTGTATTCCAGCCATCCACATTAGCAGTTGGTGTATCCTTCTAGATGCTTTGTTTTTGTCT
TGTTTTTATACCCTTGAACATTATTAATGACTGCAGAGCTTTCTAAGTGGCTTTAATAACACTCAAAGAACTCTTCCTATTTATGCCCCTCTGTGCTTTACAGGTGTTTGTTTTTGGTCC
TGATAAGAAGCTGAAGCTGTCTATCCTCTACCCAGCTACCACTGGCAGGAACTTTGATGAGATTCTCAGGGTAGTCATCTCTCTCCAGCTGACAGCAGAAAAAAGGGTTGCCACCCCAGT
TGATTGGAAG
AGGTAAAGATGTTTTTAAAAAGCAGTTTCTCTACTTGCCTGAAGGGCCAGTCTCTAAATGGCCAACTTCAAGGTCTGTGTTACCTGTTTCTAGCACGCAAGTACACTGGG
AGGATTTTTCCTCATGGCTGAGTTCAAGATTTGCTGAAAGGCCCTTTTCAAGGTCTTTATAACACCTTTTATACACAACACAAACTCCCTATATGGCTTTCCAACTTTTAGATAATTTGG
AAAAATTATTGGTCAGAATGATTCCTTTTCCTAATAGAAGGTTTAAAAAAAAAAATTTTATCTAACCCTTCCCTGATGGCAAAATATTTATCGCACAATCTTAATTGGCCATTTCCGTTA
AGTCATGGCTGTAAAAGTACTGGTGTATTAATGTCATTAAGTATTTAATTTCTCTTAAGCTTCATTCTTTTAAACCTGTGCTAGAATTCTCCAAAATTTGTTCATAAACTTTTCATCTTT
AGGACATGGATAACATCACAAGAGTATCTTAACATTGCTACATTTTTAAAATAATGCTAACCTGAATAGCAGGTTTTGTTTTGTTTTTTTCTGACAGACAAATCACTTAAATTCTGTATC
CACTAGTTAACTTATTATTACTTATTTATGTACTTATTGAGCCCAGATAGTAGTGAACTGGGGAGATAGCAGTGAATAATAGAAAGTCCTTGCCCTCATAGAACTTCCATTCCAGTGAGT
GGAGACAAACAGTAAACAAGTTTATTAAGTGGTGATAACAGGTGCTACAGGGAAGAATCAAGCACAGATGGGGAGAATAACAGCACAGGGGTGGGAGAGTGACTGTCAAGGAATGCCTGT
CTATGAAGGGACCTTTGGAGAAAAACACAGAGAAGATGTGACCAAGGCATGTATACTTGTGAGGGACGAGCACTATAGGCAGAAGGAGCAGTTAGTGCAAGAAACTGGGCCTACAAGTGA
GCTTGGCATGTTGGAGGAATACAAGGAAAGCTAGCATGCTTGGAGAAGAAGCTGCAGAAGGTGGGGTGAGGGACAAGAGATGAGAGGAGGCAGGATTCCATCACACAGGGCTTGCAGGCC
ATGATACTCAGAATTAAATGTAAAGTGTGGTGGCCAGCTGTTACTGGGTTTAAAACAGGACTGTTTCTTGTTAAGATGGGGGAACTGCTTTCCTGCCAAAAGTGCCAAAGATCAACTTGG
AAAACAAAATCCTCACAGAGGGGAGAGTAAAGAACACTTGATTAGTCTCATTAGCACCTGTAGCTACTTTTCTAAAGTTAATTCCTGAAGGCCTTGAAGCTTCACTATGAGATTGAATTT
CACCATTCTCAATGTCTTTCAATAGGATGGGGATAGTGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAACTTTTCCCGAAAGGAGTCTTCACCAAAGAGCTCCCATCTGG
CAAGAAATACCTCCGCTACACACCCCAGCCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGGAGGTCTGCTTCTCGGGGACGTGGCTCCCAACTTTGAGGCCAATACCACCGTCGGCCGCATCCGTTTCCACGACTTTCTGGGAGACTCATGGGGCATTCTCTTCTCCCACCCT
CGGGACTTTACCCCAGTGTGCACCACAGAGCTTGGCAGAGCTGCAAAGCTGGCACCAGAATTTGCCAAGAGGAATGTTAAGTTGATTGCCCTTTCAATAGACAGTGTTGAGGACCATCTT
GCCTGGAGCAAG
GATATCAATGCTTACAATTGTGAAGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATAGGAATCGGGAGCTTGCCATCCTGTTGGGCATGCTGGATCCAGCA
GAGAAGGATGAAAAGGGCATGCCTGTGACAGCTCGTGTG
GTGTTTGTTTTTGGTCCTGATAAGAAGCTGAAGCTGTCTATCCTCTACCCAGCTACCACTGGCAGGAACTTTGATGAGATT
CTCAGGGTAGTCATCTCTCTCCAGCTGACAGCAGAAAAAAGGGTTGCCACCCCAGTTGATTGGAAG
GATGGGGATAGTGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAA
CTTTTCCCGAAAGGAGTCTTCACCAAAGAGCTCCCATCTGGCAAGAAATACCTCCGCTACACACCCCAGCCTTAA

Retrieve as FASTA