Entry information : Ptro1CysPrx01 (Prx VI)
Entry ID 4970
Creation 2009-01-29 (Christophe Dunand)
Last sequence changes 2010-11-08 (Myriam Duval)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-11-08 (Myriam Duval)
Peroxidase information: Ptro1CysPrx01 (Prx VI)
Name (synonym) Ptro1CysPrx01 (Prx VI)
Class 1-Cysteine peroxiredoxin    [Orthogroup: 1CysPrx001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type Brain
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ptro1CysPrx01
start..stop
S start..stop
Ptro1CysPrx01-2 456 3.32e-166 1..224 1..224
Pabe1CysPrx01 456 3.32e-166 1..224 1..224
Hs1CysPrx01 456 3.32e-166 1..224 1..224
Ggo1CysPrx01 456 3.32e-166 1..224 1..224
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4970' 'join(152977801..152977895,152981728..152981884,152985775..152985921,152986667..152986813,152988150..152988278)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 152977801..152977895 93 N° 2 152981728..152981884 155 N° 3 152985775..152985921 145 N° 4 152986667..152986813 145
N° 5 152988150..152988278 127  
join(152977801..152977895,152981728..152981884,152985775..152985921,152986667..1 52986813,152988150..152988278)


exon

Literature and cross-references Ptro1CysPrx01 (Prx VI)
Protein ref. GenBank:   XP_001148286
DNA ref. GenBank:   NC_006468.2 (152977801..152988275)
Protein sequence: Ptro1CysPrx01 (Prx VI)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   224
PWM (Da):   %s   24922.14  
PI (pH):   %s   6.29
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSDINAYNCEEPTEKLPFPIIDDRNRELAILLGMLDPAE
KDEKGMPVTARV
VFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYLRYTPQP*

Retrieve as FASTA  
Remarks Genomic (Chromo 1, 4 introns). 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGGAGGTCTGCTTCTCGGGGACGTGGCTCCCAACTTTGAGGCCAATACCACCGTCGGCCGCATCCGTTTCCACGACTTTCTGGGAGACTCTCGTAAGTGGCCACCGCGTAGCCCT
GTCCTGGCCTCGGTTGCGCCGGACTCGGAGGTTCCTTCCCTGTTTCTTCTCCCTTCCGTCCTCCCGGCCGCTCAGCCCCCTGCGCCGCCCGCCCCTTCCCCCGCACCGGTTCCCGCGCGC
GCCAGGCCGTGTGGCCTCTGCTCAGCGTCGGCTGCGCTGCTGGGAGCTGGCACCCGTTCGGCCTGCCCTGCGCGGGCCACTTGATCCCTCCTGGCTTCCCCGCCTCCGGCGTGGCTGGGC
AAGGCCACGCCAAGGTGGGGGGTGGGGAGGATAAAATTGGGTTCTGCGGGTTCTGGAAACTCACCGCCCGCGGGAGGGTTTGTTGTCCGTTTAACTCGTCTTAGTAAACTGTGCAGGTAG
CGTGGTCAGGCCGAGGGCGCAGGGGCGGGGCGGCATTGACGATCACTTCCCCGGACTAGTGCCCAGGGTCGCACCGCCCTCCCACCCTCCGTTCTGGAATTTGCTCCCTGGGGAGGATGG
GTGTCTAAAGCCAAAGTCGGAGGACACAGCTGCTGGCTATAGGTTACAGGAAGGCCAACGTATCATCTGAGGGTGCAGTGGTATTTGCAGGCTTCTGGGCACAAAATGTGAAATTTAAAA
CCACTAGCTGCCAAGTAGGTGGCCGAAAGACTTTTTGTCCAGAGCCGCCTCCAATGGCCAAGATATGATTTGATAACAGCTTTAGGAAGAGCCAAGAACACTCTGCGTAGGTGTGCCTTC
AGAGATTCCAGAACTTGCAACACTTGGAGGGAAGGACATTCTGACGCTGTTCCGCTGGAGTGGCCTATTCTTGCTAGTGATGGCCGTTCCAGGCTCCAGGACACGTGTACTCCCCAACTT
TGATACTCTCTTGTTTCCCAGTGGCTTGCCCCTCACTGTCCCCTCCGCTTTCTACCTTGCTTCTAGCACATGAGCTTGCTGATGATAGCCAAATTGATGACCTGTGATCTGACTTGGCAG
TTTTACCATTATGGATAGGAGTAGTAAATCGGTGTTGCCCTTTTTTTTTTTTTTAACAGCTCCTGAATCAGCAAACTGGAAGTTGCTTAGTTTTCATCAGAAGCATTCCAGGCATGTCTA
GTTATATTATGGTTCTGGAGTACTAGTGGTCCCACTACACTGTGGGGCTCCAAGGCTTGACGACAGTTCTTCCCCAGATTATATCCTTTTTATATACAGTATCCAGGGAGACAGGCTTAT
GAAATTAATCAGTGATTGGACAGGGCTGTGCAGAGAACCAGGGAGAGATTCTTACACATCATATGCCTATCCAACCCTTTATAACCTCTTAAGTCCCTTTTCCAGCCACTGAATAGGGAA
AAGTTAAGCTTTGTGAAAGATAGGACTAGGCCATAAAAAGGTTGAGAAATGGAATATTCAAACCTTGAATGCAGAAAAATACTTTAGAAATACAGCTTATGGCCATTCTTATACTTAGGA
TCTAGGTAGTAATATTTCTCCAGCAATCCTTGGGATTTTTAGAGTTGTGTTCCTTCCCATTTCTACCTGCAGCCCTCATCCCCCATCCCCATGAAACATAAACTATTTCCAGAACTCTTA
GCTTGTATAGATTAAATATTAGCATAAAACGTATTTACTGTGCCAACAATTATAAATGCTGTCACTTTTTAAGCTAACCATACTTTTTTGGGGTTTTGTTAATGTTTATTGGCCTCTAGA
TCCATCTAGATTTGATCAAAAGTGGTACTTTATCAGGGAGCCATAGTTAGGAACACGATAGAAATATCTGCATTTATTAACTAATATACAAGTCTGCCTAGGATCAGGCATAGTATTCCC
TACCTTACCGGGAAGAGAAGTTTGAGCCTTTTATAGGTTTATGACACATGGATTTTTGCCTGATTTTTCCAATTTTCTATTCTGTATATGATCCCAAATCAGACTGTCAATTTTTGATTC
AGGTATTTTTGAGAAGAAAAAATTAAAATGTATCTCTCTACCTTACCCCTGATCATTGTAAACAACTAAAGAGTTTGGGTGCTTGAGTTTACTGGACCTTATCGCTGTTTCTTTAAGTGG
TAGAAGCAGCTTCTTCATAGCACATCTTCACTAAGCAAAATATGTGTTTTCCAGGGGTCTTCTGGGGCTTAGTAAGTGGGAACCATTCTCTTGAAGGAGGAAACCTTTTGTCTTTTGAAA
ATGGGTAAGAAAATGGGAGAATGTCACTGAATTACTCTTAAGTACAGCAGTAGGAAGACTTGGAGGGGAAGGAAGGCCAAGGTAAGACATTCTTGGAGTTTATCGTATTTGTAGCCATGA
GGTAAACTGGAGTTTCACTTCTGAGGGAGGGAAGGACGTGAACTGGCTTAAAACCAGTTCCTTTTGCATGATTCAGCAAAACAGTCTTTATGGACTCACAATGGAAAAAGAACTCCTAAC
TTTTCTAATTTATCCTCCTTTTAACGATAGAGGAGGAAACGCCCTGTTCCATTTCTTCTCAACTTCTGGAGACCTTCTGTTAAGTCTCATCTAACCATTAAATAGATCGTTTTCCATAGA
ATCTAAGGCCTAGATTTTACTCATAGTGATATTATCTACTTCAAAAGATATACTCTATGTTCTTCCTTTTGCCCTTCATAGTAAAGTGAACATAGTGCACACCTCCACAATCTTAAAAAA
AAATACTAACTTTCTTCCCAGTCTTGCCATAGGGCCCTCCATCCTTTTTGTAAGAAGATCTTTTTCCTTCTTGAAACCTTGGGAGTTGAGTGGCAGCCGTAAGTAGGAAGGAGGTGCCCT
TGTCTTTGCTTGTTCTCTGTGCTCAGGGAAACTTCGGAAAGGTCAACTTGGCATCTAGGCTAGATTTAGTTATCTACTAGTTTAGGATCCTGCCTAAATCATCTGGTTTAGGATGGTTTA
AGTTGATGGGGATGTGGAGAACTGAGTGTTAAATTTTCCTTTTCAGTTGAAAGAGTAGTTTCTGTTGCCAAGAAGAAGGAAATGGTACTTCAGCTTTCTTCGTCACAGCTTGAAATGTGC
TCAAAATTATAAAATCTTAGACAATGATGACTTAGATATTAGTATTTACCTAAGAATTTGCTGTTGTAGAAATCTACATTGCAGGCTATCAAAATTCTACCTGCTTGGTCTGAAGAAAGA
AGAAAAAGAAACTGCAAATGAAGAGATAGGTAAAACTGTGAAGGTGCTATTGTTTTGTCAGAGTATAAATATTGAGTGTCATGTTTGGCAGGTTAGATCAGTAAAGTGGTTTTACAAAAG
ATTTTATATCCACTTGCTTCAAAGAAGCCAAGTGTCAACTTTAATTTTTACATATAAATAGAAGATAGAAACCTATTTATTTCAGATTACATAATTTGTTTATTATTACAGTCAGGCATT
TGTTTGGATTCAGGGCATACTGGGACATCCATTATTGGAGCTGAATGTCAGGGTCTATGCTAGAAAAAAATGTAGAAAAGGATAAGAAGAAATAATTAAGTGTTTTCAGTGAACTACTTG
GCTTGAATAGCACAGATTGTATTAGCCAAAAAGGAGTCAGGGTGGCACCATAATTATTAAAGGAGGCAACACCTTAACATTAGTCTTTTTAAATATGTGTCATCTTGAATTTCATGTCTT
TGATTGAATTGGGCTATAAGCATAGGCTTCTCTGGAGGTAAGTAGATTGAAAAGCACTCCTCAACAGAAAAGCTTAAAAGTAAATATCATCATAAGCATTCATTTAAAAAAGAAAGCCTG
TTTTTGATCCAGAAGTTGCGACTTTTCATTCTCTGTGATGTTGGTGATAACTCTTAATTCAATTGTGACCTTGTTTTTCTTCCTTTCAGATGGGGCATTCTCTTCTCCCACCCTCGGGAC
TTTACCCCAGTGTGCACCACAGAGCTTGGCAGAGCTGCAAAGCTGGCACCAGAATTTGCCAAGAGGAATGTTAAGTTGATTGCCCTTTCAATAGACAGTGTTGAGGACCATCTTGCCTGG
AGCAAG
AGGTTAGTATCAATTGGCATGTGCTTTGAGCCTGAGATTATAGGTCAAGTTATAAATTATGGAGTACTTGGTTTTGAGGTTAAGGTACAAGTAAGCCTTAGGTTCAGAGTTCAC
TAATTATTTGAAAATTTCAATTGAACCACACAGTGATCACATTGCTAAATCCATTGGTCAGTCAATTCTCAGCCCTCCTCTTGGCCTGCCAGCAGCATTCAACCCAGGTGATCACTGTAC
CTCCTGAAACTTTTTCCTTTCTTGACTTCCAGGACACCACATTCTAGCTGTTCCTGCTCACTGATTCTTCATCTCCCAACTCCTAATTTATGCTGAAGTTACCCTGAACTTATTTCTTGG
ACCTCCTCTCTTTTCTGTCTGCACTCTTTCCCTTGGTGAGCTCATCCACTCACCTTTAAATACCATCTATGTGCTGTGATTCTCAAATTTTCATCTCTATGCCAGACTCTTCCAGGTTCA
TTTAACCACTGCCTACCTAGCATCTCTCCTGGGATGTCCAGTCATCTCAAACCTAGCATGTCTAACTAGGCCTCATTCTTAGATCCAGAGTTTTACTCATCTAAGCTAATGGCAACTACA
TTTTTATAGTTGTTCACACCCCAAATCCAGGAGCCATTCTGAATTCTTCATGTTTTTTCACGTCATACATCTGATTTATCCTCAAACTTGTCAGCTCTACCTTCAAAATATGTCCTGTAT
CATAGATGGAAGACTCACTTCCCAGGGATCTGTGTGACTTACCCTCACCTCTTTTGGGTCTCAACTCACAGGACATTTCATCAAAGCCTTTCTTGTCCTCATTATCTAAAATTATAACTC
CTTTTCACGTTCACCATCCCCTTCTCCTCAGCACTCTGCATACTACCTATTTAGTTTGTTTGTTTCTTCCTAGTAGAGTGTAAACTCAGCAGGAACAGAGACTCCTGTTTAGTGCACTGC
TGGAACAATGCTCACTACTCAGTATATCCTAGGCGATCAGTCAATATTTGTTGAATGAATTAACTGAAGGAAATACCTACTTCTGGCAAAAGAATTTACTTGAACAGTAAATTTGGTGGT
CTGAATTTACCTTGAAAACATTTTAAGAACTTGACTGCACTGTGCTGTTAAGTAATAATGATAACTACTTTTTGAGGGTTGTATACTAGAAACTATGTCAAACGTGCAGTTGAATGAAAG
ATGTATTGACTTGTGAGTTAGGGGTCTGTGGCTGCATCCTATAGCAGTTAATGCCAGTTAATCCTAAATACCTGAGACTAGAAGAATCATGTGTAGGAGAAAAAAGAAGGGCAGTTATCT
GTCTTGAAGTAGAATTTTTTTTCATTCCTTACACTTCTCAGTGAGTGGTAACTGTAGTTTTTGCTATCATTTTTCATTTTCATTTTTGCAGTTGAACATACTTTTTTCACTCACAGAGTT
GGAGGGACTTGCCCAAGACTGCCCAATGGCAATGAGATTTCAACCTCAAATCAATGTTCTTTTTAATGCAAGATGATACAGAGTAGGATTTAGCCTAATTTAGGATAGAATAAAGCCAAA
TAATTTAGGATAGGTTCTTTGGTGTTCATGGGTGTAATCTAATGCCCATGATGCAAGTGGCAGAGTAGAGAATTAGTGCACAGCAATAATTAAAGTGACATATTGCCAAAGGAAGCGGTT
ATAGCCCATTGTATAATACCTTTTAAAGGACAGACGCATACTCAGGTTTATTTTACCTGCTGAGCTTCTGCCTTAGAAGTTTTCAGAATTGTAATTACATTGAATAGGAAAAAAGTCTGA
ACTATCAGAAGCAGTGCCGCAACTTTGACAAACAACTGATTATATAATAATCTGCCTCTAGCATGAGACTATATTAATTATTATTTAGCTCTGGTGACTTCATAAGCAGCCAATGACAAC
AGAAAGTTAAGATAATAAAATGAAGGAATGTTACAATTTGTTGTCATCCGGGAGCCTGAGGCAGGAGAATGGCTTGAACCCGAGAGGTGGAGGCTGCAGTGAGCTGAGATCGCGCCACTG
CACTCCAGCCTGGGCAACAGAGACTCCACCTCAAAAAAATAAATAAATAAAAAGAATTTGTTGTTATCCACTTCAGAGCTCATTAATGCCACATTTGTCACATCTCTGTTGAGAAATCCA
CAATGGTTTTGTATCTGCTATGCCATCAAGCCCCTGTTTTACTTTCAAGCTACACACAATAGACGTTATTCCAATTTTAAATCCTCTTTTCCATTACTTGCTAAACTCTATCCAACTAAG
TTCCTCACTCTCCTATCAATAGTTTATGTACAGAGTTGCCCACATGTTTCATTAATATCGTTCCTGGCTGGGCACGGTGGCTCTCGCCTGTAATCCCAGCACTCTGGGAGGCTGAGGCAG
GTGGATCACAAGGTTAGGAGTTCAAGGCCAGCCTGGCCAAGATGGCGAAACCCCGTTTCTACTAAAAATACAAAAAAAAATTAGCCGATGTGGTGGCAGGCGCCTGTAATCCCAGCTATT
CAGGAGGCTGAGGCAGAGAATTGCTTGAACCTGGGAGGCGGAGGTTGCAGTGAGCCAAGGTTGCGGTGAGCCAAGATCGCACCAGTGCACTCCAGCCTGGGCGACAGCAAGACTCTGTCT
CAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATACACACACACACACACACACACACATACACACATATACACACACATATACATATATATACATATACACACGTATATAA
TATATATACACATATATATATGTGTGTGCATATATATATATAGTTCCTGATTCCTAGAATGCCTTTCTTTTCTCTGTGAAAAATCTTACCCATCCTTCAAGGGCCTAGATAGAAGTCCTG
TTCTTTTCTTGAAGCCTTTTGTAACTTTTGGAGTCCTACAAATGGGAGTGTTCATATACTTCAGTATTTACCATCCACCATTTAACATTAGTCTTGCATTTGCTGCTGCTTCATACTGGA
ATCATCTCTAACCAAATGAGAAGTTCCTTTGAAGGGAGGAGCCGTGTCTTACTCATCTGTATTCCACATGTATTTACCATAATGCTTAGCCCACCTTAAGTGCTATATCAATGCTTAATC
AAATAACAAAACTAGATTTTTTTTTTCTCCAAAAGCTTCCAGGGATAGGAAAAGTAGAAATAAATGGATGAATAAAGTTTTACTAGGGAAGGAGGGAGGTGTATCATTTTTCTTTAGTTC
AGACTTGAAATGCTTTGTTTTCTCTTTGAATTTCACCCTAGTTTAGGTTTACTTCTGCCTTTTCACCCATTTATTTTTGACTTGTCCTTCAAGTATATATTCAACTCTCCATTCTTGTGT
TTGCTTTGTTTTGTGATTTGTTTTTTTTTTTTTTTTTTGGTCATTTCTTATTTGTCTTGTAACTTAGCATCTGAGTCAGGATGCTTTTGAGGTAGGGACCAGATCTATAAGATTTTCTTT
ACATATGGCATTATTTCTAGATGTGATGGATTTAACAAACCTATTGTTATCTGATGATTTTTACAGTATTTGGGTACCCAGAGGTACCTTGTATTTGGATCTAACTAAATTATTGCAATT
TTAAAGGGGTTGCTGCTATTTTCTCATAGCAGTAAAAGCATGCTGAATTTAAGAGAACTGGGCATGAAAACAGCTTTGGTCCATGATTACAACCTAAGTACTGTACTCTGCTGTTATTCC
TGGCAATAATTGGAATGAAGAGTGTTCATCTACTCACTTTTTAAAATTAAAATTGCTTAAAGAAAATTACTGTGATTTGGTCCTCTTTCCTGTCTTGCAAGGTGATGGCTGTTAACTGAT
GAAATTCAGAGCACGTGTTGGGTTTAGATTCTTCTTTCCCCTTTTACTTGTGTTTCAGGATATCAATGCCTACAATTGTGAAGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGA
TAGGAATCGGGAGCTTGCCATCCTGTTGGGCATGCTGGATCCAGCAGAGAAGGATGAAAAGGGCATGCCTGTGACAGCTCGTGTG
TGGTAGGTCATACAAATTCATTTTGTAGTTAGCAT
AACTGATCAGGCTGTATGTCCGTGTAAATGCTGGTACCAGCTAGAGGAGATAGGGGAATATCTACAATTATGAAATAACTGTGTATTGGCGACAATATCACCGATTATCTGTAATGCTGA
TGCAATTTTCAGCTAAATTTTTCAACCGCTTTATTCATAGTTCATGGAAATCTACAAAAAAAAAGTTGTTTATCCTAAAATGTCTTCCAGAATTGAGAAACCTTTTCATAGCTCTCCTGA
CTGCTCTCCTGACTGCCCTGTCTTTAAAGCGATGGGCCATATCCTTCTTCATAAGGCAGCTCTGTTTTAATTTTTTATTTGTTCTGTCCTCCGCCCACTAGAAAACAAACCCAATCCCTC
ATCTGAATAAATGCACAACTATTCAAGGAACAATATCAACTCCCATTAGTATTATTTTTATGAGTCATCCCCAATTGACACAGCCTTTCCCTTGATTAAATTTGCATATCAGTTTTTCTT
ACTGGGAAAGCCAGAACCAAATAGAATTCCCTTCTACGTTTAGAAAATAACGGGGAGAAGAAAATTATCTGTATTCCAGCCATCCACATTAGCAGTTGGTGTATCCTTCTAGATGCTTTG
TTTTTGTCTTGTTTTTATACCCTTGAACATTATTAATGACTGCAGAGCTTTCTAAGTGGCTTTAATAACACTCAAAAAACTCTTCCTATTTATGCCCCTCTGTGCTTTACAGGTGTTTGT
TTTTGGTCCTGATAAGAAGCTGAAGCTGTCTATCCTCTACCCAGCTACCACTGGCAGGAACTTTGATGAGATTCTCAGGGTAGTCATCTCTCTCCAGCTGACAGCAGAAAAAAGGGTTGC
CACCCCAGTTGATTGGAAG
AGGTAAAGATGTTTTTAAAAAGCAGTTTCTCTACTTGCCTGAAGGGCCAGTCTCTAAATGGCCAACTTCAAGGTCTGTGTTACCTGTTTCTAGCACGCAAG
TACGCTGGGAGGATTTTTCCTCATGGCTGAGTTCAAGATTTGCTGAGAGGCCCTTTTCAAGGTCTTTATAACACCTTTTATACACAACACAAACTCCCTATATGGCTTTCCAACTTTTAG
ATAATTTGGAAAAATTATTGGTCAGAATGATTCCTTTTCCCAATAGAAGGTTTAAAAAAAAAAAAAAACTTTTATCTAACCCTTCCCTGATGGCAAAATATTTATCGCACAATCTTAATT
GGCCATTTCCGTTAAGTCATGGCTGTAAAAGTACTGGTGTATTAATGTCATTAAGTATTTCATTTCTCTTAAGCTTCATTCTTTTAAACCTGTGCTAGAATTCTCCAAAATTTGTTCATA
AACTTTTCATCTTTAGGACATGGATAACATCACAAGAGTATCTTAACATTGCTACATTTTTAAAATAATGCTAACCTGAATAGCAGGTTTTGTTTTGTTTTTTCTGACAGACAAATCACT
TAAATTCTGTATCCACTAGTTAACTTATTATTACTTATTTATGTACTTATTGAGCCCAGATAGTAGTGAACTGGGGAGATAGCAGTGAATAATAGAAAGTCCTTGCCCTCATAGAACTTC
CATTCCAGTGAGTGGAGACAAACAGTAAACAAGTTTATTAAGTGGTGATAACAGGTGCTACAGGGACGAATCAAGCACAGATGGGGAGAATAACAGCACGGGGTGGGAGAGTGACTGTCA
AGGAATGCCTGTCTATGAAGGGACCTTTGGAGAAAAACACGGAGAAGATGTGACCAAGGCATGTATACTTGTGAGGGACGAGCACTATAGGCAGAAGGAGCAGTTAGTGCAAGAAACTGG
GCCTACAAGTGAGCTTGGCATGTTGGAGGAATACAAGGAAAGCTAGCATGCCTGGAGAAGAAGCCGCAGAAGGTGGGGTGAGGGACAAGAGACGAGAGGAGGCAGGATTCCATCACACAG
GGCTTGCAGGCCATGATACTCAGAATTAAATGTAAAGTGTGGTGGCCAGCTGTTACTGGGTTTAAAACAGGGCTGTTTCTTGTTAAGATGGGGGAACTGCTTTCCTGCCAAAAGTGCCAA
AGATCAACTTGGAAAACAAAATCCTCACAGAGGGGAGAGTAAAGAACACTTGATTAGTCTCATTAGCACCTGTAGCTACTTTTCTAAAGTTAATTCCTGAAGGCCTTGAAGCTTCACTAT
GAGATTGAATTTCACCATTCTCAATGTCTTTCAATAGGATGGGGATAGTGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAACTCTTCCCGAAAGGAGTCTTCACCAAAGA
GCTCCCATCTGGCAAGAAATACCTCCGCTACACACCCCAGCCTTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCCGGAGGTCTGCTTCTCGGGGACGTGGCTCCCAACTTTGAGGCCAATACCACCGTCGGCCGCATCCGTTTCCACGACTTTCTGGGAGACTCATGGGGCATTCTCTTCTCCCACCCT
CGGGACTTTACCCCAGTGTGCACCACAGAGCTTGGCAGAGCTGCAAAGCTGGCACCAGAATTTGCCAAGAGGAATGTTAAGTTGATTGCCCTTTCAATAGACAGTGTTGAGGACCATCTT
GCCTGGAGCAAG
GATATCAATGCCTACAATTGTGAAGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATAGGAATCGGGAGCTTGCCATCCTGTTGGGCATGCTGGATCCAGCA
GAGAAGGATGAAAAGGGCATGCCTGTGACAGCTCGTGTG
GTGTTTGTTTTTGGTCCTGATAAGAAGCTGAAGCTGTCTATCCTCTACCCAGCTACCACTGGCAGGAACTTTGATGAGATT
CTCAGGGTAGTCATCTCTCTCCAGCTGACAGCAGAAAAAAGGGTTGCCACCCCAGTTGATTGGAAG
GATGGGGATAGTGTGATGGTCCTTCCAACCATCCCTGAAGAAGAAGCCAAAAAA
CTCTTCCCGAAAGGAGTCTTCACCAAAGAGCTCCCATCTGGCAAGAAATACCTCCGCTACACACCCCAGCCTTAA

Retrieve as FASTA