Entry information : GmPrx11 (Glyma13g38300.1)
Entry ID 476
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2011-10-10 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx11 (Glyma13g38300.1)
Name (synonym) GmPrx11 (Glyma13g38300.1)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue types Etiolated hypocotyls
Hypocotyls
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx11
start..stop
S start..stop
GmPrx55 652 0 1..326 1..326
GmPrx12 642 0 3..326 1..324
GmPrx86 639 0 1..326 1..326
LjPrx13 565 0 1..326 1..327
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '476' 'complement(join(39112120..39112538,39113157..39113319,39113459..39113647,39113742..39113951))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 39113742..39113951 208 N° 2 39113459..39113647 187 N° 3 39113157..39113319 161 N° 4 39112120..39112538 417
complement(join(39112120..39112538,39113157..39113319,39113459..39113647,3911374 2..39113951))


exon

Literature and cross-references GmPrx11 (Glyma13g38300.1)
Literature Public Soybean EST Project
DNA ref. Phytozome 12:   Gm13 (39113951..39112120)
Protein sequence: GmPrx11 (Glyma13g38300.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (303)
PWM (Da):   %s   35553.3 (33082.0)  
PI (pH):   %s   8.16 (7.78) Peptide Signal:   %s   cut: 24 range:24-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKMGSNLRFLSLCLLALIASTHAQLQLGFYAQSCPKAEKIILKFV
HEHIHNAPSLAAALIRMHFHDCFVR
GCDGSVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADILTLAARDTIVATGGPYWKVPTGRRDGVISNLVEARNNIPAPFDNITTLQTLFANQGLDLKDLVLLSGAH
TIGIAHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKAFKCKDLSKLNTTKIEMDPGSRKTFDLSYYSHVIKRRGLFESDAALLTNSVTKSQIIQLLEGTVENFSAEFATSIEKMGRINVK
TGTEGEIRKHCAFVNS

Retrieve as FASTA  
Remarks Complete sequence from genomic and 22 + 2 ESTs.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAATGGGAAGCAACTTGAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCAACTCATGCCCAACTTCAGCTTGGTTTTTATGCCCAGAGCTGCCCAAAAGCTGAGAAAATC
ATTTTGAAATTTGTTCATGAGCATATCCACAATGCTCCATCACTAGCAGCTGCATTGATAAGAATGCATTTCCATGATTGTTTTGTAAGG
GTATGTGGTTCAAGCCTATAATTTTCTTTC
ATTTTTTACTTAACAAGTACCATATATGTTAGATTAAAGAACTAACTAAGATGAAGTATTTCAGGGGGATGTGATGGATCAGTCCTTCTGAACTCAACAACCAATCAGGCTGAGAAGAAT
GCTCCTCCAAATCTCACAGTAAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTCACTTTGGCTGCCAGAGAC
ACTATTGTAGCCACA
GTAAGTACTCAATTGCTATCAGGAAAATCTTAAGAGTATAAGCACAACTTCTGCTTCACCTTTATTATCTTTACACTTTCTTTTTGAGAACAAGATGACCCATTT
GCTGGTTTATGCCATTACTGACATTGGTGTTCAGGGGGTGGACCCTATTGGAAAGTTCCAACAGGTCGAAGGGATGGGGTCATCTCTAACTTGGTGGAAGCCAGAAATAACATTCCTGCT
CCATTTGACAACATCACTACGCTACAGACACTCTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTG
GTATCATTTATGAAACAAATTCCTAAGCATTATTGTTGAAA
GACTAACACGTTTTTGAGTCCCTCAATTTTGGAACAAGTTTACTTTTGGTCTTCCTAAGTTTAAAATTGATCTTTTTACTTCATGTAATTTGAAGAATATCTGTTTTAGTGTCTCTGCAT
AAACGTTGCTTATGATGTAGCCAACAAATTATAACTTGTTTACATGACAACTCACTTTGATTTTCCATTTTGAGCATAGGGACTGAAACAATTTTTTTTTCAAGTAATATGGACAAAAGC
TTAATTTTATATTTGGAGGACAGAAAACAGATTTATCCTAAATTTAAATAACTAAAAACATATGTAATCCTGATTGAAAATATACCTAAATATTTGGAGTTTGAAATGGATAAATTTGTT
TTTAGGAATTAGTTAATTATCTTTCAAAGCTTTAGAATGCTGTTTAGATAAAGATAAAAATGAGGGTCTTGTTCTTATCATTCAGACTCGTCAATTTGTTTTTAAGATTAAAACGTTGTT
AGTATCTGAATTTTGCGCCTCTATAAAAACCAATAAATTGGTGTGAATTATGAATTGTTCTTGTGCTAGTAATGAGCAAGAGTTCAAATTGTTTCAGGTGTGCTCACACAATTGGTATCG
CTCATTGTTCATCATTATCAAACCGCTTGTTCAATTTCACTGGCAAGGGTGATCAAGACCCTTCACTAGACAGTGAATATGCTGCAAATCTGAAAGCCTTCAAGTGCAAGGACCTCAGTA
AATTGAACACCACAAAAATTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCACGTTATTAAGAGAAGGGGTCTATTTGAATCAGATGCTGCATTGTTGACTA
ACTCAGTTACAAAGTCTCAAATCATCCAATTGCTTGAAGGGACAGTTGAAAATTTCTCTGCTGAGTTTGCAACCTCCATAGAGAAAATGGGAAGAATTAATGTGAAGACAGGGACAGAGG
GAGAGATCAGGAAGCATTGTGCATTCGTAAATAGCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAATGGGAAGCAACTTGAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCAACTCATGCCCAACTTCAGCTTGGTTTTTATGCCCAGAGCTGCCCAAAAGCTGAGAAAATC
ATTTTGAAATTTGTTCATGAGCATATCCACAATGCTCCATCACTAGCAGCTGCATTGATAAGAATGCATTTCCATGATTGTTTTGTAAGG
GGATGTGATGGATCAGTCCTTCTGAACTCA
ACAACCAATCAGGCTGAGAAGAATGCTCCTCCAAATCTCACAGTAAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTGGTCTCTTGTGCTGAT
ATCCTCACTTTGGCTGCCAGAGACACTATTGTAGCCACA
GGTGGACCCTATTGGAAAGTTCCAACAGGTCGAAGGGATGGGGTCATCTCTAACTTGGTGGAAGCCAGAAATAACATTCCT
GCTCCATTTGACAACATCACTACGCTACAGACACTCTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTG
GTGCTCACACAATTGGTATCGCTCATTGTTCATCATTA
TCAAACCGCTTGTTCAATTTCACTGGCAAGGGTGATCAAGACCCTTCACTAGACAGTGAATATGCTGCAAATCTGAAAGCCTTCAAGTGCAAGGACCTCAGTAAATTGAACACCACAAAA
ATTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCACGTTATTAAGAGAAGGGGTCTATTTGAATCAGATGCTGCATTGTTGACTAACTCAGTTACAAAGTCT
CAAATCATCCAATTGCTTGAAGGGACAGTTGAAAATTTCTCTGCTGAGTTTGCAACCTCCATAGAGAAAATGGGAAGAATTAATGTGAAGACAGGGACAGAGGGAGAGATCAGGAAGCAT
TGTGCATTCGTAAATAGCTAA

Retrieve as FASTA