Entry information : GmPrx55 (Glyma12g32170.1)
Entry ID 550
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2011-07-04 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx55 (Glyma12g32170.1)
Name (synonym) GmPrx55 (Glyma12g32170.1)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx55
start..stop
S start..stop
GmPrx11 652 0 1..326 1..326
GmPrx86 642 0 1..326 1..326
GmPrx12 638 0 3..327 1..325
LjPrx13 573 0 1..326 1..327
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '550' 'join(35724304..35724513,35724605..35724793,35724932..35725094,35725689..35726107)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 35724304..35724513 208 N° 2 35724605..35724793 187 N° 3 35724932..35725094 161 N° 4 35725689..35726107 417
join(35724304..35724513,35724605..35724793,35724932..35725094,35725689..35726107 )


exon

Literature and cross-references GmPrx55 (Glyma12g32170.1)
Literature Public Soybean EST Project. Vodkin,L Functional Genomics Program for Soybean.
DNA ref. Phytozome 12:   Gm12 (35724304..35726107)
Protein sequence: GmPrx55 (Glyma12g32170.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (303)
PWM (Da):   %s   35778.42 (33200.1)  
PI (pH):   %s   8.33 (8.02) Peptide Signal:   %s   cut: 24 range:24-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKMGSNFRFLSLCLLALIASSHAQLQLGFYAKSCPKAEQIILKFVHEHIHNAPSLAAALIRMHFHDCFVRGCDGSVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCAD
ILTLASRDSIVATGGPYWKVPTGRRDGVISNLVEARNNIPAPFDNITTLQTLFANQGLDLKDLVLLSGAHTIGIAHCSSLSNRLFNFTGKGDQDPSLDSEYAANLKTFKCKDLNKLNTTK
IEMDPGSRKTFDLSYYSHVIKRRGLFESDAALLTNSVTKAQIIELLEGSVEKFFAEFATSIEKMGRIKVKTGTEGEIRKHCAFVNS*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 4 ESTs.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAATGGGAAGCAACTTCAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCATCTCATGCTCAACTTCAGCTTGGTTTTTATGCCAAGAGTTGCCCAAAAGCTGAGCAAATC
ATTTTGAAATTTGTTCATGAACATATCCACAATGCTCCATCACTAGCAGCTGCATTGATAAGAATGCACTTCCATGACTGTTTTGTAAGG
GGGTATGTGGTTCAAGCCTATACTTACCTT
TCATTTTTACTTAACAAGCATACTATGTTAGATTAAGGAGCTAACTAACATGAAGCATTTCAGGGATGTGATGGATCGGTGCTTCTGAACTCAACAACCAATCAGGCTGAAAAGAATGCT
CCTCCAAATCTCACAGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAGGCTGAATGCCCTGGTGTGGTCTCTTGTGCTGATATCCTCACCTTGGCTTCCAGAGATTCA
ATTGTAGCCACA
CAGTAAGTGCTCAATTTCTATCAAGAAAATCTTAAGAGTATAAGTACAACTTCTGCTTCACCTTTATTATCTTTATACTTTCTTTTTGAGAACAAGAATAACCCATTT
GCGGGTTTGTGCCATTACTGACTGATTTTCAGGGTGGACCCTATTGGAAAGTTCCAACAGGTCGAAGGGATGGGGTCATCTCTAACTTGGTGGAAGCCAGAAATAACATTCCTGCTCCAT
TTGACAACATCACTACGCTACAGACACTCTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTG
TGGTATTATTTGAAAGGCTTAAATATGTTTTTAATCTCTCAAATT
TAAAATAAGTTTAATTTTGGTCTTCCTAATTTCAAATTGATCTTTTTATTCCATATAATTTGAAGAATGTCTTTTTTAGTGGCTCAACGTAAATGTTCTTAGAGACTTGGCTTATGTAGC
TAACAAATTATAAGTTGTTTACATGACAAAAGATTAATTTTATATTTGGAGGAAAAAAACAAATTCATTTTGATTTTGCATTTTGAGCAGAGGGACTAAAACACACTCTTTTTTTTCAAG
TTATATGGACAAAAGATTAATTTTATATTTGGAGGAAAAAAACAAATTTATCGAAATAACTAAAAACATATTTAAGCTTGATTGAAAATACACCTAAATATTTAGAGTTTGAAGTGGATA
ATTTTGTTTTTAAGGAATTTGTTAATTATCTTTCAAAACTTTAGAATGCTGTTTAGATAAAGATAAAAATAAGTGTCTTGTTCCTATCATTCATGCTTGCCTATTTGCTTTTAAGGTTAG
AACGTTGTTAGTATTTGAATTTTGTGTCTTGTTCTTGTGCTTGTAATCACCAAGAGTTCAAATTGTTTCAGGTGCTCACACAATTGGTATCGCTCATTGCTCATCATTGTCAAACCGCTT
GTTCAATTTCACTGGCAAGGGTGATCAAGACCCATCATTAGACAGTGAATATGCTGCAAATCTGAAAACCTTCAAGTGCAAGGACCTCAATAAGTTGAACACCACCAAAATTGAGATGGA
CCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCACGTTATTAAGAGAAGGGGTCTATTTGAGTCAGATGCTGCATTGTTGACTAATTCAGTTACAAAGGCTCAAATCATTGA
ATTGCTTGAAGGGTCAGTTGAAAAATTCTTTGCTGAGTTTGCAACCTCCATAGAGAAAATGGGAAGAATTAAGGTGAAGACAGGGACAGAGGGAGAGATCAGAAAGCATTGTGCATTTGT
TAATAGCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAATGGGAAGCAACTTCAGGTTTTTGAGTCTTTGCCTCTTGGCATTGATTGCATCATCTCATGCTCAACTTCAGCTTGGTTTTTATGCCAAGAGTTGCCCAAAAGCTGAGCAAATC
ATTTTGAAATTTGTTCATGAACATATCCACAATGCTCCATCACTAGCAGCTGCATTGATAAGAATGCACTTCCATGACTGTTTTGTAAGG
GGATGTGATGGATCGGTGCTTCTGAACTCA
ACAACCAATCAGGCTGAAAAGAATGCTCCTCCAAATCTCACAGTTAGAGGCTTTGACTTCATTGACAGAATAAAGAGCCTTGTTGAGGCTGAATGCCCTGGTGTGGTCTCTTGTGCTGAT
ATCCTCACCTTGGCTTCCAGAGATTCAATTGTAGCCACA
GGTGGACCCTATTGGAAAGTTCCAACAGGTCGAAGGGATGGGGTCATCTCTAACTTGGTGGAAGCCAGAAATAACATTCCT
GCTCCATTTGACAACATCACTACGCTACAGACACTCTTTGCCAACCAAGGACTTGATTTGAAGGACTTGGTCCTGCTCTCTG
GTGCTCACACAATTGGTATCGCTCATTGCTCATCATTG
TCAAACCGCTTGTTCAATTTCACTGGCAAGGGTGATCAAGACCCATCATTAGACAGTGAATATGCTGCAAATCTGAAAACCTTCAAGTGCAAGGACCTCAATAAGTTGAACACCACCAAA
ATTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTAGCTACTATAGTCACGTTATTAAGAGAAGGGGTCTATTTGAGTCAGATGCTGCATTGTTGACTAATTCAGTTACAAAGGCT
CAAATCATTGAATTGCTTGAAGGGTCAGTTGAAAAATTCTTTGCTGAGTTTGCAACCTCCATAGAGAAAATGGGAAGAATTAAGGTGAAGACAGGGACAGAGGGAGAGATCAGAAAGCAT
TGTGCATTTGTTAATAGCTAA

Retrieve as FASTA