Entry information : MtAPx-R ( Medtr3g107060.1[4.0] / Medtr3g107060.1[3.5])
Entry ID | 5198 |
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Creation | 2007-08-22 (Christophe Dunand) |
Last sequence changes | 2016-04-07 (Catherine Mathe) |
Sequence status | complete |
Reviewer | Christophe Dunand |
Last annotation changes | 2016-04-07 (Christophe Dunand) |
Peroxidase information: MtAPx-R ( Medtr3g107060.1[4.0] / Medtr3g107060.1[3.5])
Name (synonym) | MtAPx-R ( Medtr3g107060.1[4.0] / Medtr3g107060.1[3.5]) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Class | Ascorbate peroxidase related [Orthogroup: APx-R001] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Fabaceae Medicago | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Organism | Medicago truncatula (barrel medic) [TaxId: 3880 ] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Cellular localisation | N/D |
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Tissue types | Cell culture Leaves Roots |
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Inducer | N/D |
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Repressor | N/D |
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Best BLASTp hits |
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Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5198' 'join(49465112..49465250,49465351..49465459,49466222..49466349,49467138..49467208,49467385..49467427,49467510..49467606,49467892..49467975,49468356..49468477,49468607..49468673,49469696..49469798)' |
Exons►
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Literature and cross-references MtAPx-R ( Medtr3g107060.1[4.0] / Medtr3g107060.1[3.5])
Literature | Torres-Jerez,I., Scott,A.D., Harris,A.R., Gonzales,R.A., Bell,C.J., Flores,H.R., Inman,J.T., Weller,J.W. and May,G.D. Expressed Sequence Tags from the Samuel Roberts Noble Foundation - Center for Medicago Genomics Research Unpublished (2000)
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Protein ref. | UniProtKB: G7JB12 |
DNA ref. | Phytozome 12: chr3 (49465112..49469798) |
Cluster/Prediction ref. | Phytozome Gene 12: 31054696 UniGene: Mtr.10760 |
Omic ref. | Gene atlas: Mtr.10201.1.S1_at |
Protein sequence: MtAPx-R ( Medtr3g107060.1[4.0] / Medtr3g107060.1[3.5])
Sequence Properties first value : protein second value (mature protein) |
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Sequence Send to BLAST Send to Peroxiscan |
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Remarks | Complete sequence from genomic (chromo 3, 9 introns) and 4 ESTs (two independant TGI both with frame shift: CA989447 + TC105875). | ||||||||||||
DNA ► Send to BLAST |
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CDS► Send to BLAST |
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