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Entry information : GmPrx[P]58 ( Glyma.09G022700 [a2.v1])
Entry ID 546
Creation 2005-11-09 (Christophe Dunand)
Last sequence changes 2016-02-24 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-02-24 (Achraf Jemmat)
Peroxidase information: GmPrx[P]58 ( Glyma.09G022700 [a2.v1])
Name (synonym) GmPrx[P]58 ( Glyma.09G022700 [a2.v1])
Class Class III peroxidase     [Orthogroup: Prx043]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx[P]58
start..stop		 S start..stop
GmPrx58 385 6e-135 72..279 134..340
GmPrx58 122 2.01e-32 1..73 1..73
GmPrx57 371 3.97e-129 72..279 134..341
GmPrx57 130 1.82e-35 1..73 1..73
GmPrx85 339 1.06e-116 72..279 137..343
GmPrx85 71 0.000000000000036 23..73 26..76
GmPrx08 337 9.29e-116 76..277 141..341
GmPrx08 77 3.15e-16 1..73 1..76
Literature and cross-references GmPrx[P]58 ( Glyma.09G022700 [a2.v1])
Literature Public Soybean EST Project. Tyler,B. Not Published. Vodkin,L Functional Genomics Program for Soybean.
DNA ref. Phytozome 12:   Chr09 (1814596..1812922)  Gm09 (1799411..1797619)
Protein sequence: GmPrx[P]58 ( Glyma.09G022700 [a2.v1])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   313 (296)
PWM (Da):   %s   34195.69 (32461.8)  
PI (pH):   %s   9.72 (9.86) Peptide Signal:   %s   cut: 18 range:18-313
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRCFGLVVIG LVxxLEGYPF SSNAGLDPFF YKKSCPQVHF IVFRVVEKVS RTDTRMPASF VRLFFHDCFV QVCAHGPFLK FPLGRRDSLT ANRTLANENL PAPFFNLTQL KAAFAVQGLD  TTDLVALSGA HSFGRSAHCL FILDRLYNFS GTGRPDPTLD TxxLQQLRQI CSQGGPNNLV NFDPTTPFKL DKNYYSNVKV KKGLLQSDQE LFSTPGADTI PIVNKFSGDQ IAFLKxxxxS 
MIKMGNIGVL TGKKGEIRKQ CNFVNKKSAE LDIGIVASEI RRVSLLYFLA KHRESYSVKN IAYSLCMLWS YYF* 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from phytozome (exon 2 is missing and frame shift).
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGGTGTT TTGGTCTTGT AGTGATAGGT CTAGTGGTnn nnTTGGAGGG TTACCCCTTC TCTTCAAATG CAGGATTAGA TCCCTTCTTT TACAAGAAGA GTTGTCCCCA GGTGCATTTC  ATTGTATTTA GAGTCGTAGA GAAAGTTTCA AGAACGGATA CACGTATGCC TGCCAGTTTC GTCAGGCTTT TCTTTCATGA CTGCTTTGTT CAAGTATGTA AAACTTACCT GCTTATTCAT  CCTCCCTTTC TATCTAATTT AATTAGTTAA TTCTTTCCCG CTTTAGATGC CTAAAAACCC ATAGTTCAAA TTTAAATAAA TCCCTTGTTA AAAAAAAAAC ACTTTTTTTA TATCTCAAAA  TGGGTTCATT ATTCTCATAA TTAAGCTCAT TATTTTGATC ACTTATAGTT AATTAGGTAC TCTATTTCCA TAAAACATTT GCCAAATTAT ATATTTAAGT TTAATTTTTA TGTATCATCA  ATATAAAGAT GATAGATTAT TAAATAATAA CAAATTATTC TATATATGAC TTTTAGATTG TTTTATATAT AAAATTAACA AATTTACTAT AATGACAATT TGTAATTAGA TAAGTTGGTG  CATATATATT AATTAGATAA ATTCTATGGA ACACTAAAAA AATAAGGGTT TGGCTTTTTG AAAAACTCTT TCTACTTCCT CTCTCAAAAA AATTAAAAAA AAAACTTAGA TCAAGTTCTT  TTGTTAAATC GTTTTTTATC AAGTTGTCGA ATCAAATAAT AACAAATAGA TGTTTATTCG TTGCAACATA TATTTAATAG AGGTTTTTAT TTATTAGAAA GAAAATTCAT GTATCATTTG  ACAGGCTCAT GGTCCTTTTT TAAAATTTCC CTTGGGAAGG AGGGATAGTT TAACAGCAAA CCGAACCCTT GCCAATGAAA ACCTTCCTGC TCCTTTCTTC AACCTCACTC AACTTAAAGC  TGCCTTTGCT GTTCAAGGTC TTGACACTAC TGATCTTGTT GCACTGTCAG CTAACAAATG TTCCCCAATT CAAATTTATC CTATGTGTTG TAACAATGCT ACCTATAATA AAATATATGT  GGTCAAGTAA AATTAAACTT GAATCCTTTG ATAAATAAGA TCTTAAATTC AATTCTTGTG TAAAAAATAT GATTGAAAGA AAGATGTTAT TGTTCATTGA CTTCGAAATT AATCATTAGT  CAAAATTCAA TGAATAAATA TAATAATACT AATAATAATA ATAAATGAAA AACATTAAAG TTACTCTAAA CTCACCATCT TAACTTGGTT TGACTTTGGA AGAATTTATC TTATAAAAAT  GATGAATTAG TATATGATTT GTAAACGATT TAATTTCAGG TGCTCATTCA TTTGGCAGAT CAGCTCACTG CTTGTTCATT CTTGACCGAT TGTACAATTT CAGTGGTACT GGCAGGCCCG  ATCCAACTCT TGATACAACT TACAACAACT GCGCCAAATA TGCTCCCAAG GTGGACCTAA CAACCTTGTC AATTTTGACC CAACCACTCC TTTTAAATTG GACAAGAATT ACTACTCCAA  TGTTAAGGTT AAGAAGGGCT TGCTTCAGAG TGATCAAGAG CTGTTCTCAA CACCCGGTGC TGATACCATC CCCATTGTCA ACAAGTTCAG TGGTGACCAA ATAGCTTTCC TTAAACTTCA  ATGATTAAAA TGGGTAATAT TGGTGTGCTA ACTGGGAAGA AAGGAGAAAT CAGAAAACAA TGTAATTTTG TTAACAAGAA ATCTGCTGAA CTTGATATAG GTATTGTGGC ATCCGAAATC 
AGAAGAGTGT CCCTCCTGTA CTTCCTGGCA AAGCATAGGG AATCATACAG TGTGAAGAAT ATTGCTTATA GTTTGTGCAT GTTATGGTCC TACTACTTTT GA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGGTGTT TTGGTCTTGT AGTGATAGGT CTAGTGGTnn nnTTGGAGGG TTACCCCTTC TCTTCAAATG CAGGATTAGA TCCCTTCTTT TACAAGAAGA GTTGTCCCCA GGTGCATTTC  ATTGTATTTA GAGTCGTAGA GAAAGTTTCA AGAACGGATA CACGTATGCC TGCCAGTTTC GTCAGGCTTT TCTTTCATGA CTGCTTTGTT CAAGTATGTG CTCATGGTCC TTTTTTAAAA  TTTCCCTTGG GAAGGAGGGA TAGTTTAACA GCAAACCGAA CCCTTGCCAA TGAAAACCTT CCTGCTCCTT TCTTCAACCT CACTCAACTT AAAGCTGCCT TTGCTGTTCA AGGTCTTGAC  ACTACTGATC TTGTTGCACT GTCAGGTGCT CATTCATTTG GCAGATCAGC TCACTGCTTG TTCATTCTTG ACCGATTGTA CAATTTCAGT GGTACTGGCA GGCCCGATCC AACTCTTGAT  ACAACnnnnT TACAACAACT GCGCCAAATA TGCTCCCAAG GTGGACCTAA CAACCTTGTC AATTTTGACC CAACCACTCC TTTTAAATTG GACAAGAATT ACTACTCCAA TGTTAAGGTT  AAGAAGGGCT TGCTTCAGAG TGATCAAGAG CTGTTCTCAA CACCCGGTGC TGATACCATC CCCATTGTCA ACAAGTTCAG TGGTGACCAA ATAGCTTTCC TTAAACTnnn nnnnnnnTCA 
ATGATTAAAA TGGGTAATAT TGGTGTGCTA ACTGGGAAGA AAGGAGAAAT CAGAAAACAA TGTAATTTTG TTAACAAGAA ATCTGCTGAA CTTGATATAG GTATTGTGGC ATCCGAA 

Retrieve as FASTA