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Entry information : MtGPx02 ( Medtr8g105630.1[4.0])
Entry ID 5699
Creation 2007-08-13 (Christophe Dunand)
Last sequence changes 2016-04-06 (Catherine Mathe)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-04-06 (Catherine Mathe)
Peroxidase information: MtGPx02 ( Medtr8g105630.1[4.0])
Name (synonym) MtGPx02 ( Medtr8g105630.1[4.0])
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue types Roots
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtGPx02
start..stop		 S start..stop
CarGPx02 317 1.36e-112 32..198 1..167
EglGPx01 307 3.74e-108 7..199 8..203
EguGPx01 306 8.6e-108 7..199 8..203
LjGPx02 305 1.07e-107 32..198 1..167
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 44557362..44557499 136 N° 2 44557073..44557149 75 N° 3 44555750..44555811 60 N° 4 44555526..44555644 117
N° 5 44555087..44555254 166 N° 6 44554960..44554992 31  
complement(join(44554960..44554992,44555087..44555254,44555526..44555644,4455575 0..44555811,44557073..44557149,44557362..44557499))


exon

Literature and cross-references MtGPx02 ( Medtr8g105630.1[4.0])
Literature Cheung,F., Moskal,W., Cooper,J.D., Xiao,Y., May,G.D. and Town,C.D. Construction and analysis of normalized cDNA library from flowers, seeds and stems of Medicago truncatula.
Protein ref. UniProtKB:   G7LBF8 [Incorrect prediction]
DNA ref. GenBank:   AC202355.7 (29133..32574) Phytozome 12:   chr8 (44557499..44554960)
Cluster/Prediction ref. Phytozome Gene 12:   31073439 [Incorrect prediction] UniGene:   Mtr.16911  Mtr.5760
Protein sequence: MtGPx02 ( Medtr8g105630.1[4.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   198 (536)
PWM (Da):   %s   22755.73 (60417.4) Transmb domain:   %s   o5-24i
PI (pH):   %s   9.03 (9.76) Peptide Signal:   %s   cut: 25 range:25-560
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDTQLLTFWNFLSFFLLLIALYFFRRNSSSKMAENSSKSIYDFTVKDISGNDVSLSQYRGKVLLVVNVASQCGLTQTNYKELNVLYQKYKDQDFEILAFPCNQFRGQEPGSSEEIQNVVC
TRFKAEFPVFDKVEVNGKNAEPLYKFLKDQKGGIFGDGIKWNFTKFLVNKEGKVVDRYAPTTAPLKIEKDIEKLLRSS*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, 4 introns) and 16 + 19 ESTs (two independant unigenes!!!). Cultivar="A17".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACACACAGTTGTTGACTTTCTGGAACTTCTTATCGTTCTTTCTTCTTCTTATAGCTTTATACTTCTTCCGCAGAAACTCATCTTCCAAAATGGCAGAAAATTCATCCAAATCCATC
TACGATTTCACTGTCAAGGTTCCATTTTTTCATACCCAGTTCTGTTTATTTATTTATTTATTTATTTTTTATGTTTTTTCAATCTAATTATTTTTTAAAAAATTTGTTTTTTGATCATGC
CCAATTTTTTTTTGCACTCAAATCTGTTGATGGGTCAATGGAAAAATTTCAAATTGATTGATTTTACTTTTCTGATTTAATTTTGTTTGTGATATGTACTACAATTACAGGAGATATCAG
TGGAAATGATGTGAGTCTGAGTCAATACAGAGGGAAGGTTCTGCTGGTTGTCAATGTTGCCTCCCAATGGTAACTTAATTATATTCATTTTTTGGTTATTGTTTATAGCTACTGTATAGA
AATTTACCTGATCTACATATTTTAATTTATTTATTTTAAATACATATAGTGTGTTGTGCTCATTTCAATCTTTTTTTGGTCTGTTAATCACTGTCCAGTCCTTTATGATTTAATTCATAT
ACACCATTTGTTCATATATATATTTTTTTCACCATCAATCAATTATGATCTGTCCTTCAATAGGCCAGGCCGGCCTACAGGGGCCTATGGCCTAGCCTATTAAGGCCTGGCCTATTTAAG
TTGAAAAGTCGCACATATAATTGATTGTGATTTTTTGGCAGTTTAAAACTTTTTACGTTGAGTGTATCCAAATTAAGCTTTGTGCTTTATATTACTCTTGCTTTGTGCAAAAACAAAGAT
AGAATTGCGAAGTATAGCTGGCACCTATGGATTATGTTGTGTGATTTGCAGTGAAACAAGTTTATCTATTTTAGTGTTTGATGTTTGAGAAATGTCATGGAGTTATTCTGTATAATATGA
TACTAGAATTTCATTATCACCAAACAAGAATACTTGCACAGTTTTTATTCATTAATCTTTCTCCATTAGTAGGTGATCTGTTATTTTGTTCAGATTCTAAATAAAAGAACACAGATTTTC
ATTCTGAAGTTAATGGTAATGTAGTACAAGAAACTTGATGTGAGATTTAAATCAATGGTGGTTACATCCTCTTGACTGTTTGGGTGCATAGAGGTTTGTTGTTTTTTGTTCTGTTTTTGT
TGATTGGTTTGGAGGTGCGCGTATTTTATGCTGTTTTGTTTTTGGTGGCACGTGTTTTTTGCGTTGTTTTGTTCTTGGCCCCTTCGTGGGTAATTGTTTTGTATTTTTGTTTTGTTTTTG
GCACACCTTCGGCTTAGAAAAAGTTATTAATGAAATTTTGTGGCTTCTTCAAAAAACAATTGGGGGTGAGATTGGACTATCATATGCGGGTTTAATGTGAATTAATCTGACACTGTAATG
CCTTAGGATCTAAGCCAAAGCAACAACTTCTTTGTTGGATGATGCTAGACAAACTTTCAGTTTCTTATTAATAGAAACTACAGCTAAAGATAGCTCAATCTATTATTACATTAAAAATGT
CAAATTTTGTGTGCATGTTTCCCTGACCATGATTTCATGCACAATTATAGGAAATTATTCTTCTCCATTTTATTCTGTCTATAACTATTAACTATAACTATAATTGTAATATTCTAATTC
ATTGTTGCAGCGCGGTTTGACACAAACAAATTACAAAGAGTTGAATGTTCTGTACCAGAAGTACAAGGATCAAGGTCCGTGACTTTAACCAAGGACAAAAACAAAAAAATACATGTCAAC
TATAATTTATGAGTGTTAATTGTGTAATACTGATACTTGTGATTGTGAATTGTCTCTAGACACTTTGAAATCTTGGCATTTCCATGCAACCAATTTCGTGGACAGGAGCCAGGATCTAGT
GAAGAAATTCAAAATGTTGTTTGCACAAGGTTCAAAGCTGAATTCCCAGTCTTTGATAAGGTGATTACCGTGATTTATTGTAAATTCTTTGTAACTTATTTGACATTTGACACACTATGC
ATGGTTATTGTAAATTCTTTGTAACTTATTTGACATTTGACACACTATGCATGGAGATGGTCTTGTTTGGACTCTCGATGTACTTGGCAATTTCCCTAGCCAAATTTTATATGCTCTTTT
TTTTTGCAATGAATTCTGCAAGGATACAACACAATATTAATATATATGCCAGTTTATATGAAAATCATTTTAATATATCAAATTATTATAGGTGTTGAAGTCAATGGGAAGAATGCAGAA
CCACTTTACAAGTTTTTGAAGGATCAGAAAGGAGGAATATTTGGAGATGGTATCAAGTGGAACTTCACAAAGTTCTTAGTAAACAAAGAAGGGAAGGTTGTGGATAGATATGCTCCTACC
ACCGCTCCTCTGAAAATCGAGGTTAGAAACATTTTAGTGCTTATATTTTAGGCCAGGTTTCTATGTACGTTGTGCTGCGATTACATGTCACTGAGTTATATGTTTCTTCTTGCAGAAAAG
GACATCGAGAAGCTTTTACGGTCTTCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGACACACAGTTGTTGACTTTCTGGAACTTCTTATCGTTCTTTCTTCTTCTTATAGCTTTATACTTCTTCCGCAGAAACTCATCTTCCAAAATGGCAGAAAATTCATCCAAATCCATC
TACGATTTCACTGTCAAGGATATCAGTGGAAATGATGTGAGTCTGAGTCAATACAGAGGGAAGGTTCTGCTGGTTGTCAATGTTGCCTCCCAATGCGGTTTGACACAAACAAATTACAAA
GAGTTGAATGTTCTGTACCAGAAGTACAAGGATCAAGACTTTGAAATCTTGGCATTTCCATGCAACCAATTTCGTGGACAGGAGCCAGGATCTAGTGAAGAAATTCAAAATGTTGTTTGC
ACAAGGTTCAAAGCTGAATTCCCAGTCTTTGATAAGGTTGAAGTCAATGGGAAGAATGCAGAACCACTTTACAAGTTTTTGAAGGATCAGAAAGGAGGAATATTTGGAGATGGTATCAAG
TGGAACTTCACAAAGTTCTTAGTAAACAAAGAAGGGAAGGTTGTGGATAGATATGCTCCTACCACCGCTCCTCTGAAAATCGAGAAGGACATCGAGAAGCTTTTACGGTCTTCTTAA

Retrieve as FASTA