View Redoxidase 5740

Entry information : ZmGPx04

Entry ID	5740
Creation	2007-08-17 (Christophe Dunand)
Last sequence changes	2007-08-17 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2010-12-23 (Marie Brette (Scipio))

Peroxidase information: ZmGPx04

Name

ZmGPx04

Class

Plant glutathione peroxidase [Orthogroup: Gpx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea

Organism

Zea mays [TaxId: 4577 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	ZmGPx04 start..stop	S start..stop
TaGPx04-1A	432	9.51e-157	1..230	1..229
SbGPx04	400	8.11e-144	1..230	1..232
OruGPx04	343	2.24e-121	5..230	15..234
OsiGPx04	338	2.24e-119	10..230	7..232

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5740' 'join(106959814..106960050,106961523..106961599,106961690..106961751,106962652..106962770,106962896..106963063,106964341..106964370)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	106959814..106960050	235	N° 2	106961523..106961599	75	N° 3	106961690..106961751	60	N° 4	106962652..106962770	117
N° 5	106962896..106963063	166	N° 6	106964341..106964370	28
join(106959814..106960050,106961523..106961599,106961690..106961751,106962652..1 06962770,106962896..106963063,106964341..106964370)

Literature and cross-references ZmGPx04

Literature	Collura,K., Wissotski,M., Campos,D., Kudrna,D., Golser,W., Ashely ,E., Haller,K., Wing,R., Soderlund,C., Walbot,V. and Yu,Y. Maize Full-length cDNA Project.
Protein ref.	UniProtKB: B6U7S4 B4FR46 [5' end] B6U7G0 [Mismatch]
DNA ref.	GenBank: AC195968.2 (68389..72948)
mRNA ref.	GenBank: EU973289
EST ref.	GenBank: EE012294
Cluster/Prediction ref.	UniGene: Zm.84644 Zm.96672

Protein sequence: ZmGPx04

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	230 (310)
PWM (Da):	24906.96 (33845.1)
PI (pH):	10.06 (7.77)	Peptide Signal:	cut: 33 range:13-322

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAPSFTSLLSAANSAAAATASRLPSAAAGRASTFVRFPHHPTGWA
GASVAAPRTARKRAPGVAYATAATEKSIYDYTVKDIDGKDVPLKKFKNKVLLIVNVASQCGLTTANYTELSHIYEKYKTGFEILAFPCNQFGAQEPGSNTQIKQFACTRFKAEFPIFDVDVNGPNTAPIYKFLKSSAGGFLGDLVKWNFEKFLV
DKNGKVIERYPPTTSPFQIEKDIQKLLAA*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 6, 4 introns) and 19 + 4 ESTs. Cultivar="B73".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTCCCTCGTTCACTAGCCTCCTCTCGGCCGCGAACTCCGCCGCCGCCGCGACCGCCTCGCGGCTCCCCTCGGCCGCCGCCGGACGGGCATCCACTTTTGTGCGCTTCCCGCATCAC
CCGACGGGCTGGGCTGGGGCCTCCGTCGCGGCGCCGCGTACGGCGCGCAAGCGGGCACCCGGCGTCGCCTACGCCACCGCAGCTACCGAGAAGAGCATCTACGACTACACCGTTAAGAGG
TGGCCTATTTCTTTTGTTCTGTTGAGATTTCCGTTCGCCATGGCCCCGTAATTTTTGCTAATGGATGGCGTTGCGTTGTGACGTGGTGACATGCCTGAAGCCGTTTAAGCGGGGTTTAAC
GGAAGCACCGTCTGATTTAGTCCGGTTTTGTATCGCTGATTGTTGCGTGCTGTTACTGTATTAGGTATTGCTGGGGTGTTGTTGTTGGGTAGGTGGGGGCGTTGCAACCATAGACTGATT
GGTGTTTTTAATGTTCCCTGGCGCTGACTGTTTGATACTTTGATAATTGGCTGAAACATCCATCACGTGGATGCTATTGAAGCATTGTTTTCAAAACCAAATGTGTATGGCAATATTACT
AGCACTATCAGGGTTGCAATGTGTAGCGATCGTAGATGTTTCGTGGAATTATGTGTTCTAAGGAGTTGTCGAGGTAGGCACAAATCTGTAACCATGGGCAAATCAATTTTATGATATATT
GTTGTGGAACTTGGCTGAAGTTGGCCAAATCAGGTTAACAGAGTCAGCCAATTTTGCAGATCAGGTCCTTCTAAGGTTAGGTATCAAGGGCGCAGAGTGTTGTAGCAGTAGACTGAATGA
TTCCCCATTCTTCTTAATTTTAAGGATGCAAAGTACACTGTGCTTGTTTTCCAACTACCATTCCACGTAATTTGTAAAATGGATATTATCGTTTATTGGCATGTAATGTTAACCAACCAG
ATGGTTTGCTGAAATTTCACAGAACAAACCTTCTGATAGAAATAAGTTTGCATCTGAGTCATGCTTTAAGATGACAGTATTAAACCCACCATGGATAGTGCTGTCCAATGATGTGTTCAT
TCATGTGCATATTTTCAATTGATTGAACTTGTAAATATTTCTATATGTCCTTTCAACTTATTGGCAAATTTAAGGTGCATGCCATGTTTGAAGGTGGGCATTATAAAACATTGTTCTAGG
ACGGTATTAGGAAATTCTTGTAGCCCTAGACTTATTAGACCAGTTAACCAGCTATGCCTAGTGAATTACTTAAAATAGAAGGGTGGTTAGTTGCAGAGATATCAAAAATGCAAAATTGTA
CATGCAATACATGTCCACATAGGATCACAGTGAAATTAAAGTAAAACAAAGAGAGATTATTATGAGAAATTTTATGGGATACCATTTGTTTAGTTGTGAAATCCGAAGTTTGTGAATTTT
ATGTTTCCCTAATGCTTTTTCTCCACATGTCGTATTTTATTGCCATCTTACATACGGATACATGAAGAAATAACCTTGCAAGTGTGTAGTGTAAGGTTTTCGGGCCTGGTTTTCCTTATA
AACTCAGTCTACCCTTTTCTATCTTAATTGAAAGGCAGACCTCCTGCCACTTGCATTCAAAAAAAACATGAAGAAATTACTTTGGTACTTTATCTTAATATGAGATCGAATATGTATGCA
CTTGTATCTGAAAGAATTATTCACTTTTCAGGACATTGATGGAAAAGATGTTCCTCTTAAAAAGTTCAAGAATAAGGTGTTGCTGATTGTTAACGTTGCTTCTCAATGTGGTAATTTCAC
TGAAAAATCTTTCACCAACCACATTCTTTGTTTTTTTATGTTTGCTGGCATTTAACTTGGCATTCATCTGTGGATCTCAGTGGGTTGACAACAGCAAATTACACTGAACTATCTCATATC
TATGAGAAGTACAAGACTCAAGAGGTGTGGCAATTTACACTGAACAATGTTGTGTATACTTATCATTTTTAGGAAATCTAGACTGAACATTGTATTTCCAATTAAAGGAGTTACCAAAAG
TTAAAGTTGTTGTACCCTTTAAATTGTGTGTTTGATCCTAATTGTCTCATAAAACCACACAATCAAGACCAGCAGTTTAACTCTAATATATGCTGTTTTTCTTGTTTATGCCAATTTATG
GGATCATTCAATTAGACCTCTTGTTATTATATAGTGACCTTTTTGTTTGTCGCATATATCCTGGCACGTATGTAACCTAGAGAGTTGGTGTGGAGAGGGAGGACTTCATGCCTCTCCCTC
TTGTATTTGTGTTTTTCTTCTATCTTAATGAAATAACACGTAGCTCTCCTGCGGAGTTCGAGAAAAAAAGTACGCCTATTCTACTGGACCATGTTGATGCATTTGCTGATTGTCCTGATT
TTTGTTGTCTAGTGGGCGTGGGTCTCGGAGGTTAAAGGTTTCTATTGCTTTTTGCAATATTTCTTGAGTCATCTAGCTTAATATATCTCTGTGGGCGAGGACCCACATTGAGCCTAGCCA
GGGCAGGCCCACACTCATTATTCTGTTTAAGTGGACATTGGGCCTTGTTTACGGTAGGTGTAAAAGCACAGTAGTTACCAGACCCTTGCTTGTTTTTTGGGCTGGTCTGCCCTTAGTGTG
TACAGTCATTCCAAATGTTGTCGTCATGAAGAGGATCCTCCTGGACTCTACAGTTAGTTTCAAAAGTCAACTTTAGAGTTTTGATGCACATTCTCTTAGATACATGAAAAGGAAATGTTG
ATGTTAGCACGAACCTTGACTTCTTGGGCTAATAGTTGCCATTTTACATTGTGTTGTTTAATAGTTAATCTATTTGACATGTAGGGTTTGAGATCCTTGCATTTCCTTGCAATCAATTTG
GTGCACAAGAACCTGGATCAAATACTCAGATTAAGCAGTTTGCATGTACAAGATTCAAAGCTGAATTTCCGATTTTTGACAAGAGGTATGCTGATTGCAGGCAGTTCAGTCATTTGTTCC
ATAGTTTATCCTGCTTAACATTATCTGACTTTACAAATAAAAAAATATTTGTGCATGATGTATCTTTTGTTCTTCTTTCTACAATTTCAGGTTGATGTCAATGGACCTAATACAGCTCCC
ATCTATAAATTTCTGAAGTCCAGTGCAGGAGGATTTTTGGGTGATCTCGTGAAATGGAATTTTGAGAAGTTCTTAGTGGATAAGAATGGCAAAGTCATTGAGAGATATCCACCAACAACT
TCACCTTTCCAGATTGAGAGGTGTGTGATTACATCTCTAGCTTTCTACAGCACACCTTCTTTGTTTGTATATTCAGTCTATTTTTGGACTCTGTTGCTCAAAATGAACATTTTCTTCTTT
TCCATATGGTTATAAAGGCTGATAGATACTTAATTAGGTGATGAATACTTAATTACATATGCCTATGCAGTGCTATCAATCATTCATTTCCCTATTAAGTAGTGATCTTGTGAGCATATC
ATGTGTCAATTAAGCGGAAGCATGCAATCTTAATATCTATAACCTATGAAACATTTTTGAATAATCAATGAAACTAAGAACTAAATCAATCTGTACTCGACAGTTGGTTTTTGTGTATTA
AATTTGAAACAAAAAGATAGAAAAAACAACCACCTGTGGACCCAATAAATAATAATAGATTTTGTGTACATCACGTTTAGGGATGATGACTTCGACAAACATCTTTTGGAGTGTCATTTA
ACACGTTTTGCTCATAAAGTTGCTTTACTGATCAGCTTGAGGAATGGCATTTTAAATTTTTCTTGAGGCTTGGTGCTTGGTACACCAATAGCACAGAAAGTATTCGATAGGTAGGCAACT
AGGGTGCTGTGCATCCACCTGAAATCATCAACCTTGTCACATTTGGGCTTCAATTGTTAACTCTTTGGCCCTACAAGGCTATAACAGAGAGCTTCATATGGAATTTCCAAGTGGCTCTAG
TAGTCGTGTTTGGCAGTGCTGACGAATAGAATGTGCCTATGAAAAGACTTTTTCAATGACAGTGCTCATCAATTCGTGATAATTCTAATACATGAGTTACCCATGCTCAAGCAGCCCTGT
GCCAACGGTGGCATTAAGATTGTTTTGCTCTAGGGGAGACTTTTACTGATGTTCTGGAGCTCGCTTTGTCAAAAGAAGCATCCAGTGTTGGCTTTGGTATAAAATATTCTCAAGTTGCAG
TAATGGATCAGTTCTAGACTTCCATCGTGTTTTGTGCTGTCAGCAAAAAAAAAAAATGCTTTCAACCTATTCTTTCTGTCACATTTCAGTGCATTAAGACAGCTTTGCCACACACTCATT
GGCTTCGAAATCTTTCGGTCGGTTTCAGTTTTAAAATGGCCACTTTTGTGTCTCATCGAGTCGCACGCTCACCTGACTTCTTGCGGTTATGATTTCATAGACCACTTGCTTAAGAAATAA
ATCCAAACCCTTTGTGCCGACCTCCCTGCGGTTTTCGGTTTTCATTACGATTTCACGTTGCTCACAGCCTCCTTGCTATATGATTTTATTCTTGCAGAAGGACATCCAGAAACTGCTCGC
GGCATAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA