Entry information : SmPrx13-1_0 (SmPrx13a_0)
Entry ID | 6987 |
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Creation | 2009-09-30 (Paula Nunes) |
Last sequence changes | 2011-01-25 (Toky Ramarohetra (Scipio)) |
Sequence status | complete |
Reviewer | Christophe Dunand |
Last annotation changes | 2011-01-25 (Toky Ramarohetra (Scipio)) |
Peroxidase information: SmPrx13-1_0 (SmPrx13a_0)
Name (synonym) | SmPrx13-1_0 (SmPrx13a_0) | ||||||||||||||||||||||||||||||||||||
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Class | Class III peroxidase [Orthogroup: Prx053] | ||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella | ||||||||||||||||||||||||||||||||||||
Organism | Selaginella moellendorffii [TaxId: 88036 ] | ||||||||||||||||||||||||||||||||||||
Cellular localisation | N/D |
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Tissue type | N/D |
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Inducer | N/D |
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Repressor | N/D |
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Best BLASTp hits |
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Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6987' 'join(6891839..6892066,6892121..6892318,6892377..6892539,6892619..6893028)' |
Exons►
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Literature and cross-references SmPrx13-1_0 (SmPrx13a_0)
Literature | Richardson,P., Lucas,S., Rokhsar,D., Wang,M. and Lindquist,E.A. DOE Joint Genome Institute Selaginella moellendorffii EST project. Unpublished (2008)
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DNA ref. | Phytozome 12: scaffold_0 (6891839..6893028) |
mRNA ref. | JGI transcript: 75799 [Incorrect splicing] |
Protein sequence: SmPrx13-1_0 (SmPrx13a_0)
Sequence Properties first value : protein second value (mature protein) |
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Sequence Send to BLAST Send to Peroxiscan |
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Remarks | Complete sequence from genomic (3 introns). No EST. Incorrect transcript prediction from JGI (no intron 1). | ||||||||||||
DNA ► Send to BLAST |
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CDS► Send to BLAST |
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