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Entry information : SmPrx14-1_0 (SmPrx14a_0)
Entry ID 7007
Creation 2009-10-06 (Christophe Dunand)
Last sequence changes 2011-01-25 (Toky Ramarohetra (Scipio))
Sequence status complete
Reviewer Paula Nunes
Last annotation changes 2011-01-25 (Toky Ramarohetra (Scipio))
Peroxidase information: SmPrx14-1_0 (SmPrx14a_0)
Name (synonym) SmPrx14-1_0 (SmPrx14a_0)
Class Class III peroxidase    [Orthogroup: Prx053]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx14-1_0
start..stop		 S start..stop
SmPrx13-1_0 687 0 1..332 1..332
SmPrx13-2_57 683 0 1..332 1..332
SmPrx14-2_57 677 0 1..332 1..332
SmPrx30-2_131 419 4.37e-148 7..332 10..331
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 6899621..6899848 226 N° 2 6899903..6900100 196 N° 3 6900159..6900321 161 N° 4 6900401..6900810 408
join(6899621..6899848,6899903..6900100,6900159..6900321,6900401..6900810)


exon

Literature and cross-references SmPrx14-1_0 (SmPrx14a_0)
DNA ref. Phytozome 12:   scaffold_0 (6899621..6900810)
mRNA ref. JGI transcript:   73829 [Incorrect prediction]
Protein sequence: SmPrx14-1_0 (SmPrx14a_0)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (310)
PWM (Da):   %s   36401.29 (34035.9) Transmb domain:   %s   i7-24o
PI (pH):   %s   8.89 (8.89) Peptide Signal:   %s   cut: 23 range:23-332
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
METWRGSVLVLLLLSLSLGILAHGESGGRKHGYHSYSRSCPQAER
IIRDTLSKHAGWDRTIPAGVLRLHFHDCFVDGCDGSILLDSTPTDGTKVEKLSLPNFMSARGFEVIEEAKQRLEAACPGVVSCADTLAIAARDSTVMLGGKYYQVPTGRYDGRVSSQERGNTLPSPFGDASALIQNFKERGLSVQDLVVLSGGHTLGTAGCATFSNRLDNFTKTGKPDPTINPRYLSHLRRQCPAPGSPNRVELDKGSEFVFDNSYHKNLARRNGVLMSDQVLNEDSRTSHYVKNLAHKQHDFLSQFAASMVKMGYIGWKN
KHNGEIRRVCSMVNTH

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). Duplication of SmPrx13a. Incorrect prediction from JGI (exon 1 is missing).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAAACTTGGAGAGGGAGCGTTTTGGTTTTGCTCCTGCTGTCACTGAGCTTGGGTATCTTGGCTCACGGTGAGAGTGGAGGACGCAAGCATGGCTACCACAGCTACTCGAGATCTTGT
CCTCAGGCCGAGAGGATCATAAGGGACACTCTAAGCAAGCACGCCGGTTGGGACAGGACGATACCAGCAGGAGTTCTTCGCTTGCACTTCCACGACTGTTTCGTCGACACGTGAGTAGCT
TTACAAGATTTAAATTCTGGTTTTCTAACTTTGCTGTTCTCCAGGGCTGTGATGGATCGATTCTTCTCGACTCAACTCCCACCGACGGAACTAAAGTGGAAAAATTGTCCCTTCCAAACT
TCATGTCCGCCAGGGGCTTCGAGGTGATTGAGGAAGCAAAGCAGAGGTTGGAAGCAGCTTGTCCTGGAGTTGTCTCCTGTGCCGACACTCTCGCCATAGCTGCCAGAGACTCGACCGTCA
TGTGGTAAGCTTAGCATCTTTTGAGAAACGCCGAATCAAGTTCTAAGACGTTGTCACTGCAGCTTGGAGGAAAGTATTACCAAGTCCCAACCGGACGCTACGACGGAAGAGTTTCCAGCC
AGGAACGTGGCAACACCTTACCATCCCCGTTTGGCGATGCATCGGCTCTCATTCAAAACTTCAAGGAGCGCGGCTTGTCAGTCCAGGACCTCGTCGTTCTCTCAGAGGTACGAATCGATT
TCAACTTCCATCTCCTTCCCTCCAGTTTGTAAGTAGGCATTAACGCTACTCCCTTGCAAACCACAGGTGGTCACACTCTTGGTACCGCCGGCTGCGCCACATTCAGCAATCGTTTGGACA
ACTTTACGAAAACTGGCAAGCCGGACCCGACCATCAATCCCAGATACCTCTCTCATCTCCGGAGGCAGTGCCCAGCACCGGGGTCGCCAAACCGTGTGGAGCTGGACAAAGGCTCGGAGT
TTGTGTTCGACAACAGCTACCACAAGAACTTGGCCAGGAGAAACGGGGTCCTCATGTCGGATCAAGTTCTCAACGAGGACTCGAGAACAAGTCACTACGTCAAGAACCTTGCGCACAAGC
AGCACGACTTTTTGTCGCAGTTTGCGGCCTCGATGGTGAAGATGGGATACATTGGGTGGAAGAACAAGCACAATGGGGAAATCAGGAGGGTCTGCTCCATGGTAAACACCCATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAAACTTGGAGAGGGAGCGTTTTGGTTTTGCTCCTGCTGTCACTGAGCTTGGGTATCTTGGCTCACGGTGAGAGTGGAGGACGCAAGCATGGCTACCACAGCTACTCGAGATCTTGT
CCTCAGGCCGAGAGGATCATAAGGGACACTCTAAGCAAGCACGCCGGTTGGGACAGGACGATACCAGCAGGAGTTCTTCGCTTGCACTTCCACGACTGTTTCGTCGACGGCTGTGATGGA
TCGATTCTTCTCGACTCAACTCCCACCGACGGAACTAAAGTGGAAAAATTGTCCCTTCCAAACTTCATGTCCGCCAGGGGCTTCGAGGTGATTGAGGAAGCAAAGCAGAGGTTGGAAGCA
GCTTGTCCTGGAGTTGTCTCCTGTGCCGACACTCTCGCCATAGCTGCCAGAGACTCGACCGTCATGCTTGGAGGAAAGTATTACCAAGTCCCAACCGGACGCTACGACGGAAGAGTTTCC
AGCCAGGAACGTGGCAACACCTTACCATCCCCGTTTGGCGATGCATCGGCTCTCATTCAAAACTTCAAGGAGCGCGGCTTGTCAGTCCAGGACCTCGTCGTTCTCTCAGGTGGTCACACT
CTTGGTACCGCCGGCTGCGCCACATTCAGCAATCGTTTGGACAACTTTACGAAAACTGGCAAGCCGGACCCGACCATCAATCCCAGATACCTCTCTCATCTCCGGAGGCAGTGCCCAGCA
CCGGGGTCGCCAAACCGTGTGGAGCTGGACAAAGGCTCGGAGTTTGTGTTCGACAACAGCTACCACAAGAACTTGGCCAGGAGAAACGGGGTCCTCATGTCGGATCAAGTTCTCAACGAG
GACTCGAGAACAAGTCACTACGTCAAGAACCTTGCGCACAAGCAGCACGACTTTTTGTCGCAGTTTGCGGCCTCGATGGTGAAGATGGGATACATTGGGTGGAAGAACAAGCACAATGGG
GAAATCAGGAGGGTCTGCTCCATGGTAAACACCCATTAA

Retrieve as FASTA