Entry information : SkoPxd02
Entry ID 7622
Creation 2010-10-01 (Marcel Zamocky)
Last sequence changes 2010-10-01 (Marcel Zamocky)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-10-06 (Christophe Dunand)
Peroxidase information: SkoPxd02
Name SkoPxd02
Class Peroxidasin     [Orthogroup: Pxd001]*
Taxonomy Eukaryota Metazoa Hemichordata Enteropneusta Harrimaniidae Saccoglossus
Organism Saccoglossus kowalevskii    [TaxId: 10224 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SkoPxd02
start..stop
S start..stop
SpurPxd01 1256 0 1..997 342..1326
SpurPxd01 149 1.71e-36 2..253 245..500
SpurPxd01 134 7.15e-32 18..253 159..410
XtPxd 1200 0 1..1055 334..1384
XtPxd 138 3.09e-33 2..253 239..493
EcabPxd01 1199 0 2..1055 294..1354
EcabPxd01 150 6.37e-37 2..253 198..452
EcabPxd01 63 0.00000000036 1..93 476..566
CjaPxd01 1194 0 2..1055 440..1500
CjaPxd01 140 1.01e-33 2..253 344..598
CjaPxd01 64 0.000000000166 1..93 622..712
Literature and cross-references SkoPxd02
DNA ref. GenBank:   NW_003119961.1 (16020..3540)
mRNA ref. GenBank:   XM_002733465
Protein sequence: SkoPxd02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1055
PWM (Da):   %s   115993.44 Transmb domain:   %s   i64-86o101-123i144-166o181-203i224-246o256-278i317-334o422-444i
PI (pH):   %s   5.45
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SPAFSYRPED TEVREGESVV LHCSATGYPR PTITWTKSDE IIPNGKTEKF NVSPSGSLQI LNVERNDHGT YECLAANGLD SITAVAQLIV LIPPGFDRRP SDQIAVEGRT IEFICRAYGN  PEPVIAWTKM GNPLPEDRRH TLLPDGTLRI ARVTKDDEGS YECQAINTAG HRQSTANLEV SKRVPPVFLI TPTDLDVVSG SDVQIPCNAN GYPLPTITWS KDGIQISESN KFYINPDGFL  IIRDAGRIDQ GRYxxxxxxx xxxxxxxxxx WYKLQSDFGK LSANTEYPGD NIVNQSINEA IANVDRAFNS TRTSLFDKSK PRTPSDLLTL FKFPTPEAIE IARAAEIFET TLEIIHESVE  NGMRVNLSHV GYKNLFNNIV SPDHLEIIAN LSGCTTHRSA INCSDMCYHQ KYRSYDGTCN NLQHVTRGSA LTAFSRILKP IYENGFNTPV GWNHSQLYYG VSKPSARLVS IHVAASPQVE  NDEKFTHMLM QWGQFTDHDL DLTVLSPSKV QFIDGQRCNE TCDNQPPCFP IPIPEGDPRI VRSTCMEFTR SSAVCGSGST SVFFNTVMPR EQINSITSYI DASNVYGSSK SLTDELRDFA  SERGLLRTGN IVASSGKPLL PFNRNTPIDC LRDENASPVP CFLAGDARAN EQLGLLSMHT IWMRESNRIA TQLLNLNPHW DGETLFQESR KIVGAQMQHI TYTHWLPKIL GPHGMQLMGE  YTGYNPNTDS SIINAFATAA FRFGHGIVNP VIYRLNSTFQ PIPEGNIPLH RAFFSPYRIV DEGGIDPVLR GLFGTPAKDL NSEQVLNTEL TEHLFEMVHH VALDLAALNI QRGRDHALPG  YNDWRVYCNM SAVSSFNELK DEISNADVRD KLERLYHHPG NVDLWVAGMV EDPLPGGILG PTFTCIIAKQ FQRTRDGDRF WYENPGVFTA AQLTQIKQTS LSSVICENSD HINRIQKDVF 
LKATYPTGYL KCEEITAMDL RVWTDCCEDC SNNNDYSVTQ LFRFKKSDKF TPAVDENKIN DKEKTDTQQS MGNAMEHLTD IVTELQQTVQ DLLNQ 

Retrieve as FASTA  
Remarks partial sequence from genomic (chromosome unknown), no EST.
DNA
Send to BLAST