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Entry information : PabePxd01 (PXDNL)
Entry ID 7623
Creation 2010-10-01 (Marcel Zamocky)
Last sequence changes 2010-10-01 (Marcel Zamocky)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2010-10-06 (Christophe Dunand)
Peroxidase information: PabePxd01 (PXDNL)
Name (synonym) PabePxd01 (PXDNL)
Class Peroxidasin     [Orthogroup: Pxd001]*
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pongo
Organism Pongo abelii (Sumatran orangutan)    [TaxId: 9601 ]
Cellular localisation N/D
Tissue type Blood
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabePxd01
start..stop		 S start..stop
HsPxd02 2638 0 1..1300 1..1300
PtroPxd01 2632 0 1..1300 1..1300
HsPxd03 2628 0 1..1300 1..1300
MmulPxd01 2529 0 1..1300 1..1300
Literature and cross-references PabePxd01 (PXDNL)
Literature Washington University Genome Sequencing Center & Baylor College of Medicinen (unpublished in 2010)
Protein ref. GenBank:   XP_002819118.1
DNA ref. GenBank:   NC_012599.1 (53382759..52907582)
mRNA ref. GenBank:   XM_002819072.1
Protein sequence: PabePxd01 (PXDNL)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1300 (1280)
PWM (Da):   %s   145278.96 (142801.7)  
PI (pH):   %s   7.01 (6.97) Peptide Signal:   %s   cut: 21 range:21-1300
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEPRLFCWTT LFLLARWCLP GLPCPSRCLC FKSTVRCMHL MLDHIPQVPQ QTTVLDLRFN RIKEIPGSAF KKLKNLNTLL LNNNHIRKIS RNAFEGLENL LYLYLYKNEI HALDKQTFKG  LISLEHLYIH FNQLETLQPE TFGDLLRLER LFLHNNKLSK ILAGSFSNLD SLKRLRLDSN ALVCDCDLMW LGELLQGFAQ HGHTQAAATC EYPRRLHGRA VASVTIEEFN CQSPRITFEP  QDVEVPSGNT VYFTCRAEGN PKPEIIWIHN NHSLDLEDDT RLNMFDDGTL MIRNTRESDQ GVYQCMARNS AGEAKTQSAM LRYSSLPAKP SFVIQPQDTE VLIGTSTTLE CMATGYPHPH  ITWTRDNGLE LDGSRHVATS SGLYLQNITQ QDHGRFTCHA NNSHGSVQAA ANIIVQAPPQ FTVTPKDQVV LEEHAVEWFC EADGNPPPVI VWTKTGGQRS VEGQHMVLSS GTLRIDHAAQ  HDQGQYECQA VSLLGVKTVS VQLTVKPKAL AVFTQLPQDT SVEVGKNINI SCHAQGEPQP IITWNKEGVQ ITESGKFHVD GEGTLTIYDA GFPDQGRYEC VAQNSFGLVV TNMFLTVTAM  QGRQAGDDFV ESSILDAVQR VDSAINSTRR HLFSQKLHTS SDLLAQFHYP RDPLIVEMAR AGEIFEHTLQ LIRERVKQGL NVDLEGKEFR YNDLVSPRSL SLIANLSGCT ARRPLPNCSD  PCFHAKYRAH DGTCNNLQQP TWGAALTAFA RLLQPAYEDG IRAPRGLGLP VGSRQPLPPP RLVATVWARA AAITPDHSYT RMLMHWGWFL EHDLDHTVPA LSTARFSDGR PCSSVCTNDP  PCFPMNTRHA DPRGTHAPCM LFARSSPACA SGRPSATVDS VYAREQINQQ TAYIDGSNVY GSSERESQAL RDPSVPRGLL RTGFPWPPSG KPLLPFSTGP PTECARQEQD SPCFLAGDHR  ANEHLALTAM HTLWFREHNR VATELSALNP HWEGNMVYQE ARKIVGAELQ HITYSHWLPK VLGDPGTRML RGYRGYNPNV NAGIINSFAT AAFRFGHTLI NPILYRLNAT LGEISEGHLP  FHKALFSPSR IIKEGGIDPV LRGLFGVAAK WQTPSYLLSP ELTQRLFSAA YSAALDSAAT IIQRGRDHGI PPYVDFRVFC NLTSVKNFED LQNEIKDSEI RQKLRKLYSF PGDIDLWPAL 
MVEDLIPGTR VGPTLMCLFV TQFQRLRDGD RFWYENPGVF TPAQLTQLKQ ASLGRVLCDN GDSIQQVQAD VFVKAEYPQD YLSCSEIPKV DLRVWQDCCA 

Retrieve as FASTA  
Remarks Partial sequence form genomic (chromo 8), isolate="ISIS 71", no EST