1. Browse the Database
  2. View Redoxidase
Entry information : PtPrx[P]26 (POPTR_0017s06560 / Potri.017G038000)
Entry ID 7954
Creation 2011-01-28 (Christophe Dunand)
Last sequence changes 2011-03-03 (Catherine Mathe)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2012-03-08 (Qiang Li)
Peroxidase information: PtPrx[P]26 (POPTR_0017s06560 / Potri.017G038000)
Name (synonym) PtPrx[P]26 (POPTR_0017s06560 / Potri.017G038000)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtPrx[P]26
start..stop		 S start..stop
PtPrx26 217 2.84e-72 1..113 212..328
PtrePrx13 209 4.59e-69 1..113 211..327
PtremPrx11 201 8.11e-69 5..113 1..113
PtPrx27 206 3.62e-68 2..113 212..327
Gene structure Fichier Exons►


exon

Literature and cross-references PtPrx[P]26 (POPTR_0017s06560 / Potri.017G038000)
DNA ref. Phytozome 12:   scaffold_17 (4988453..4988794)
Omic ref. ePlant:   Potri.017G038000
Protein sequence: PtPrx[P]26 (POPTR_0017s06560 / Potri.017G038000)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   113
PWM (Da):   %s   12443.23  
PI (pH):   %s   6.58
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

VLGSQDPALD SEYAARKCRS LNDNTTIVEM DPGSSRTFDL SYYRLLLKRR GLFQSDSALT TNSTTLSFVN QLLQGSLENF FAEFADSMEK MGRINVKTGT VGEIRKQCAV VNS 

Retrieve as FASTA  
Remarks Pseudogen. Small part of Prx sequence. Missing 4 AA compared to PtPrx26
DNA ►
Send to BLAST
CDS►
Send to BLAST