View Redoxidase 8364

Entry information : MguAPx-R (mgv1a010472m)

Entry ID	8364
Creation	2011-05-06 (Christophe Dunand)
Last sequence changes	2011-05-06 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2012-01-04 (Qiang LI)

Peroxidase information: MguAPx-R (mgv1a010472m)

Name (synonym)

MguAPx-R (mgv1a010472m)

Class

Ascorbate peroxidase related [Orthogroup: APx-R001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Phrymaceae Mimulus

Organism

Mimulus guttatus [TaxId: 4155 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MguAPx-R start..stop	S start..stop
SaAPx-R01	480	5.39e-173	1..310	1..315
IaquAPx-R01	414	1.82e-146	53..309	76..336
InAPx-R01	407	1.54e-143	53..309	78..338
VvAPx-R	401	2.52e-141	9..312	7..331

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8364' 'join(188163..188395,188688..188803,189032..189102,189213..189255,189340..189436,189715..189798,189901..190022,190123..190189,190279..190378)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	188163..188395	231	N° 2	188688..188803	114	N° 3	189032..189102	69	N° 4	189213..189255	41
N° 5	189340..189436	95	N° 6	189715..189798	82	N° 7	189901..190022	120	N° 8	190123..190189	65
N° 9	190279..190378	98
join(188163..188395,188688..188803,189032..189102,189213..189255,189340..189436, 189715..189798,189901..190022,190123..190189,190279..190378)

Literature and cross-references MguAPx-R (mgv1a010472m)

DNA ref.	Phytozome 12: scaffold_79 (188163..190378)
Cluster/Prediction ref.	UniGene: Mgu.17648

Protein sequence: MguAPx-R (mgv1a010472m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	311
PWM (Da):	33438.19	Transmb domain:	i3-25o
PI (pH):	7.44

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MRSTTAAVDPSFLGSATSFSAAWGHKFPVINLQPVKLVGKRLTVACATPPSSFGRRALIYIATTSFLMPSPSFASATDENALLQEEIGKVLSKGRAAGLLRLVFHDAGTFDDGDKTGGMN
GSIIYELDRPENRGLEKSLKILEKAKVQVDAVQPVSWADLIAMAGAEAVSICGGPKIPVQLGRLDATVPDPVGKLPEETLVAATMKQVFQKKGFSTQELVALSGAHTLGTKGFGSPTVFD
NSYYKILLEKPWSASGGMSDMIGLPSDRSLGEDDECIKWISKYADDQNLFFEDFKNVYVKLVNSGAKWRSM*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo ?, 8 introns) and 20 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAGGAGCACCACTGCCGCCGTCGATCCCTCGTTTCTCGGTTCCGCCACCTCCTTCTCCGCCGCTTGGGGCCACAAGTTCCCCGTCATAAACCTACAGCCGGTCAAATTAGTAGGGAAG
AGGCTCACAGTAGCCTGTGCTACTCCACCGTCTTCATTTGGGAGGCGAGCTCTGATTTATATAGCGACGACGTCGTTTCTCATGCCCTCTCCCAGTTTTGCCTCTGCTACTGAGAGTAAG
CATAGTCCTCCTTTGGTTGTACATATATTTTGCTCCAATTTAATTTCACTTATCTGGTTTCATAACTAGTGGCAATGCTTTTATTCAAATAAAAACCTAATCCTGTTTATCCAAATAGTA
CTATTTCAGCCAGAATTCTTTTGATTGCTGAAGATTCAATGGCATTTTCGCCATCTTTGTCGCAGTTAATTAGGCATCCACTGGATAGTATTAGCTAATTACGAATCATTTAAAACCAAA
TGATAGTTTGTGAAATGTGTTATTGACCTAATGGTTTTGGGCTCCAGTGAAAATGCTCTGTTACAAGAAGAGATCGGTAAGGTATTGTCCAAAGGCAGGGCTGCCGGTTTACTTCGTTTA
GTTTTTCACGATGCTGGCACTTTTGACGACGGTGATAAAACAGAGGTATTGCATCGAGGAATCCATCTTTCTTTTCAAAGTGAAATTTTCAAAATTGCATATTTTGGGGTAATTGTAAAA
GTAGGAGTTCGTTTTCCATTACTTCAAAAATTAGACTAGCAGAATCTAATTCTTGTTTTTCTTTTCCTTAACCCTTTATGGAAGATTTGTTTCCCCTGATTTTAGATCTTGTTTATTAGC
CTTTTGATTTCCTGGTCGATTTCGTTATTTTAGGTGGTATGAATGGATCGATAATTTACGAACTTGACAGGCCTGAGAACAGGGGTCTTGAGAAGTCACTGAAGAGGCAAGCTCCTCATC
TTCTTCGTGTATCCCTTAATTCGATTTTTGTATGCCGTCAATTGTATCCAGTATTTTCATTCATTCCTTCCTCCTAAGTGGGTGCATTGTTCTCAGATTCTGGAGAAAGCAAAAGTACAA
GTGGATGCGGTACAACCAGAGGTATTTCTTGGCAAATGGAACGATGAGAATTTACTGCTCAAGCATTAATTGTATATCATATAACTCTTCTTTGGTGCCTGTTAGTATCGTGGGCGGATT
TGATTGCCATGGCTGGAGCGGAAGCTGTTTCAATATGTGGAGGTCCAAAGATCCCTGTTCAACTCGGAAGATTAGATGCAACACGTAAAGTGCTCTAATCTTGTTAATCCTTGCTTGTAG
TTGTTCTGATTTTCTGGTTTCTCAGTATGTATTGATTTCTCGAGATGATTTACTCGAAAGAAGAGTCTTGAACTACTACAATCATGAAAAGATTAGTGGACAATTGTGGCATAAGAAAAA
TAACCACACGGGATATATCATTAGATTTCACGTAGTACTGCTATTTGGTGACGTCTTAATGTCGTTTACAGGGTTAAAGTAAAATGAGAAAGAGTTTTTTATCACTTCACCTTGTCTTTC
AGGGTGCCTGATCCTGTTGGGAAGCTTCCGGAAGAAACACTCGTTGCAGCTACCATGAAGCAAGTTTTTCAAAAGAAAGGCTTCTCTCGTGAGTATCCATATATCATTTCCCAAAAAATA
AAAAAATCACTTACGGTATATACATCCAATGTTTGTGCTGGAATAAATGCTAAACAAAGTTTGTATACAGAACACAGGAACTGGTTGCATTATCGGGAGCTCATACACTAGGAACCAAAG
GCTTCGGAAGTCCGACAGTCTTTGACAATTCTTACTACAAAATTCTTCTAGAGAAGCCATGGTCAGCTTCAGAGGTGATTCACCGTGTTCCTTCTTCCTTTGACATCTTGTTTTTCAGGC
GACCATTTTAAGAACTAATAACATGTAATTAATTATTTTTTATCACACATTTAGGTGGGATGTCTGATATGATTGGCCTTCCTTCGGATCGATCACTTGGTGAGGATGATGAATGCATCA
AAAGTAAGCCATTTCCTCACAACCCTTGTCGCTGGTATTTTTGCACTTTTGTTATTTGTATCCCGATTGATATATGTTATTGTTTTCGACAGGTGGATATCAAAGTATGCGGATGACCAG
AATCTGTTTTTTGAAGATTTTAAGAATGTCTATGTTAAACTTGTCAATAGTGGTGCCAAGTGGAGATCTATG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

AAAAAGGTAA TAACGGTAAG AAATTAAGAA TCATTCACCA AAAATCAACC GACAACTGTT CTCACTTCTC AGCTGCTTAC TCTACTCAGC AAAGATGAGG AGCACCACTG CCGCCGTCGA TCCCTCGTTT CTCGGTTCCG CCACCTCCTT CTCCGCCGCT TGGGGCCACA AGTTCCCCGT CATAAACCTA CAGCCGGTCA AATTAGTAGG GAAGAGGCTC ACAGTAGCCT GTGCTACTCC ACCGTCTTCA TTTGGGAGGC GAGCTCTGAT TTATATAGCG ACGACGTCGT TTCTCATGCC CTCTCCCAGT TTTGCCTCTG CTACTGATGA AAATGCTCTG TTACAAGAAG AGATCGGTAA GGTATTGTCC AAAGGCAGGG CTGCCGGTTT ACTTCGTTTA GTTTTTCACG ATGCTGGCAC TTTTGACGAC GGTGATAAAA CAGGTGGTAT GAATGGATCG ATAATTTACG AACTTGACAG GCCTGAGAAC AGGGGTCTTG AGAAGTCACT GAAGATTCTG GAGAAAGCAA AAGTACAAGT GGATGCGGTA CAACCAGTAT CGTGGGCGGA TTTGATTGCC ATGGCTGGAG CGGAAGCTGT TTCAATATGT GGAGGTCCAA AGATCCCTGT TCAACTCGGA AGATTAGATG CAACGGTGCC TGATCCTGTT GGGAAGCTTC CGGAAGAAAC ACTCGTTGCA GCTACCATGA AGCAAGTTTT TCAAAAGAAA GGCTTCTCAA CACAGGAACT GGTTGCATTA TCGGGAGCTC ATACACTAGG AACCAAAGGC TTCGGAAGTC CGACAGTCTT TGACAATTCT TACTACAAAA TTCTTCTAGA GAAGCCATGG TCAGCTTCAG GTGGGATGTC TGATATGATT GGCCTTCCTT CGGATCGATC ACTTGGTGAG GATGATGAAT GCATCAAGTG GATATCAAAG TATGCGGATG ACCAGAATCT GTTTTTTGAA GATTTTAAGA ATGTCTATGT TAAACTTGTC AATAGTGGTG CCAAGTGGAG ATCTATGTGA TTCATGGAAA GCATCGGTCG TCGCTCGTGT TAAAAACATG GTACTATGGT
CCATTCTAAA TAATTCGGAT ATATGTCCAA AACCTCGTGG CCTATTTCTT TCACTGTATT TTTTCTCTCA TTCATAATAA GGGAAATTTA TGACCATCT

Retrieve as FASTA