Entry information : RcAPx-R
Entry ID 8365
Creation 2011-05-09 (Christophe Dunand)
Last sequence changes 2011-05-09 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: RcAPx-R
Name RcAPx-R
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcAPx-R
start..stop
S start..stop
MeAPx-R 499 9.5e-180 18..328 24..335
PtAPx-R 494 1.35e-177 19..328 27..337
VvAPx-R 454 3.59e-162 3..328 10..330
CclAPx-R 446 6.91e-159 11..328 19..335
Gene structure Fichier Exons


exon

Literature and cross-references RcAPx-R
DNA ref. Phytozome 12:   29848 (1023147..1026393)
EST ref. Galderia Genome:   EG662028.1 [5' end]
Protein sequence: RcAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (294)
PWM (Da):   %s   35873.27 (31934.0)  
PI (pH):   %s   8.76 (8.74) Peptide Signal:   %s   cut: 25 range:25-318
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MHLLCFSAGPAPRWIMTLEFKFPSKSQHPYFSTIKSRAKPLQACS
LSRNEDS
GKDLDWVYTKRRIFISISTLPFLFHLHECFEGFGAKAAESDTTIYNLMKGEVRKVVSKGKAAGVLRLVFHDAGTFEMNGTGGMNGSIVFELDRPENAGLKKSLVVEKAKKEVDAIQPVSW
ADMIAVAGAEAVSVCGGPTIPVLLGRLDS
GEPDAEGKLPEESLGASSLKQCFQRKGLSTQELVALSGAHTLGSKGFGNPTVFDNSYYKILLEKPWMSAGMSSMIGLPSDRALVEDDECLR
WIKKYADDQNTFFKDFKSAYIKLVNSGARWKSM

Retrieve as FASTA  
Remarks Complete sequence frpm genomic (9 introns) and 1 EST. No prediction from phytozome.
DNA
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CDS
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