View Redoxidase 7460

Entry information : MeAPx-R (cassava4.1_018316m)

Entry ID	7460
Creation	2010-08-09 (Christophe Dunand)
Last sequence changes	2015-12-16 (Achraf Jemmat)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2015-12-16 (Christophe Dunand)

Peroxidase information: MeAPx-R (cassava4.1_018316m)

Name (synonym)

MeAPx-R (cassava4.1_018316m)

Class

Ascorbate peroxidase related [Orthogroup: APx-R001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot

Organism

Manihot esculenta (cassava) [TaxId: 3983 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MeAPx-R start..stop	S start..stop
RcAPx-R	499	6.93e-180	24..335	18..328
PtAPx-R	486	1.78e-174	1..335	1..337
VvAPx-R	452	2.44e-161	25..336	22..331
CsAPx-R	429	3.99e-152	16..335	18..335

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7460' 'complement(join(1395990..1396089,1396285..1396351,1396681..1396802,1397160..1397243,1397483..1397580,1402051..1402121,1402651..1402775,1403175..1403289,1403454..1403634))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1403454..1403634	179	N° 2	1403175..1403289	113	N° 3	1402651..1402775	123	N° 4	1402051..1402121	69
N° 5	1397483..1397580	96	N° 6	1397160..1397243	82	N° 7	1396681..1396802	120	N° 8	1396285..1396351	65
N° 9	1395990..1396089	98
complement(join(1395990..1396089,1396285..1396351,1396681..1396802,1397160..1397 243,1397483..1397580,1402051..1402121,1402651..1402775,1403175..1403289,1403454. .1403634))

Literature and cross-references MeAPx-R (cassava4.1_018316m)

DNA ref.	Phytozome 12: scaffold00847 (1403634..1395990)
EST ref.	GenBank: DV446698.1 [3' end]
Cluster/Prediction ref.	UniGene: Mes.8692 [3' end]

Protein sequence: MeAPx-R (cassava4.1_018316m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	335 (301)
PWM (Da):	36788.96 (31597.9)
PI (pH):	7.98 (6.50)	Peptide Signal:	cut: 0 range:Ymax-300

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASLTILPAKAPLVSSIPSSSSHLEFKFPVKLQHSSLSTVKFRLKPLQARFIPATGDEDSGENLDWVSKRRRNLICVSTLPFLFHFRESFEGFSAEAAELDATYMLMKEEVRKVVSKGKA
PGVLRLVFHDAGTFETDGNSGGMNGSIVFELDRPENAGLKKSLKILQKAKSEVDSKQSVSWADMIAVAGAEAVSICGGPTIPVILGRRDSVEPDAEGRLPEESLGASALKQCFKRKGLST
QVLVALSGAHTLGSKGFGNPFVFDNSYYKILLEKPWNSSDKMASMIGLPSDHALVEDDECLRWIKKYADDQDIFFEDFKNAYIKLVNSGARWKSL*

Retrieve as FASTA

Remarks

Complete sequence from genomic (9 introns) and 1 EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCATCTTTAACCATTCTCCCCGCCAAAGCTCCTCTTGTTAGCTCCATTCCATCCTCCTCTTCCCATCTCGAATTCAAATTTCCCGTCAAATTACAACATTCCTCTCTCTCAACTGTC
AAATTTAGACTCAAACCTCTCCAGGCTCGCTTTATTCCGGCCACTGGCGATGAAGATTCTGGTAAACTGTACCGTCTCTTTATCATGGTGTGTTTGATTGCTGAGAAAACGAAGCAAATA
ATAATAATAATAATAAAGAGAAGAAGATAAGAGTAGTTTTTCTAATATGTTAATAAAGAGAAGAAGATAAGAATAGTTTTTCTCTAATATGTTTTTGGGGTCTACAGGCGAGAATCTTGA
CTGGGTTTCTAAGAGGAGGAGAAACCTCATTTGTGTTTCCACACTGCCTTTTCTATTTCATTTTCGAGAATCCTTCGAGGGCTTTAGTGCTGAGGCAGCTGAGTGAGTTAATCAAATCCC
TCGCTTTTTTTCTTTGGTTCAGCTGCTTCAATTTTGAATCCCTTTTCTTTTACTTGTAAACGTTTGATTCAAGTAGACAATACACGACTATGATTTTGTTCCGCAACTATAGGAGGATTG
TTGACATATACTTCTACTGTCTTCATGTTTCCTTTTTTTCTAGTGGAGGTTTATCTTGAAAGATGATCCTCGAATTTTTTATGTCACAGACATGTGAGTGCTCAGCTACTTACAGCCTCA
ATGTTTGTGACTTAGATGCTTTAGTGTAATCTTAAGTGTGTCCACGGTAGATATATGTGTTTCTGCTTGTAGTGCCTCACTAGATGCTAGTTATTCAATGTTCTTATTTTTATGATTTTT
TCTTTTCTCTGTTGATCCTGAAGATTGGATGCCACATATATGCTCATGAAGGAAGAAGTAAGGAAGGTAGTGTCCAAAGGCAAGGCTCCTGGCGTACTTCGACTTGTTTTTCATGATGCA
GGAACCTTTGAAACGGATGGTAATTCAGGTATTTATCATGGGAAAATCATATGATTTTAAAGTGATTATAGTTATCATTTGTATTAGGAATTCCCATCAAATGGTTTGATAAGATGTTTT
ATTGGACCTTTGTAATATAATGAAAACTTTTAAGTAAAACTTTATGTAACTAGGTTGTTATGATGTGAACTTTTATTGTCTGGGGTATGCACACTTAAAATTAATTCATGGAGGATTACT
GCCAAAGCTACTTCCTGCTAAGACAATTTATGCCAATCAATAAGCTCATTCATTAGTAATTCTGTAGAATCATTTGAATAGCTTGAGATGGTTGATGCCTTTGGTGTTCAAGGTGCTGTG
GAAATTATTATTTTAACTTTGGTTCTGTTGAAATGGTATGTGAACACGGGTGAAGCCATTCAGTTACTGTGAATTATTTTTTTATGCTGCAGTTTGTTCTTTTTCTTGTTTGCTTATTCC
TTTACATTCAAACTTACTAGGTATAGTGCTGTTCTCTTTTGCTTTAGACTTACTCTCTACACTATGATTATATCTGCAGGGGGTATGAATGGTTCTATAGTTTTTGAACTTGATAGACCT
GAAAATGCAGGTTTAAAGAAATCTTTGAAGGTATTTCTCTCTCGCTTTCTCTTCTATAAACACCAACATGTAACCTGCTCGCTTGTATATGAATGCATATTTGAAGTTTGAGTGTGTGGT
TTTAGCAGTTTTAATAAATATGTTTACTCTAAATTATAAAATTAATATAAATTTGTAGTGGTGAATCATAATATATACTACTTATGTCAAATAACATACTTTTAGTGACCAAGTAGTTTC
ACTCAAACTTTTTGTAATTAAAAAAAATCAAGTTAAAGAAAAATTAACTCAGAGTAGTCTTTTCAGAATTTGACAATAACCATTTATGGTGGTTGTGAGCTGTAGAAGGATAATATTTAT
TGTATATCACAATAGAGATTACAACCTATTTATACATGAGAGACAGTAACTAAACAGAAAGGAAATGACAATCAATCTCGATGTGTTTAGTCCTCTCGTGAAATACTGGATTGGAGGCAA
TGTGGATAGCTGCTTGATTATCACATTACAACTTAGCAGGCACCGAATTTGTGAACCCAACTTCTTCCAACAGTTGACGTACCCACAAGATTTCACAAACGGCTTGTGCCATAGCTCGAT
ATTCAGATTCAGCACTAGAACGGGAGACCACATTTTGCTTCTTACTTTTCCATGAGACCAAGTTACCTCCCACAAAAACACAATACCCAGTAATTGACCTCCTATCAACTTTCGAGCCTG
CCCAATCAGCATCACAAAAGCATTCAATATTTGAGTGCCCATGGTTACCATAGAATAGGCCTCTCCCTGGGGCCCCTTTAAGGTAACAAAGAATCTGTCCTAGAGCATCCCAATGGGCAA
CAGTAGGAGAAGACATAAACTGACTTACCACACTCACTGAATATGCAATATCAGGACGAGTCACCGTCAAATAATTCAGCTTGCCAACTAATCTTCTATACCTTCCAGGATCTGCAAATG
GCTCACTGTCTTCTGTGGTAAGTTGAAGGTTAGGGGTCATTGGGGCACTACAAGGCTTAGCACCCAATTTTCCTGTTTCTGCCAACAAATCAAGAACATATTTTCTTTGAGACAAGAAGA
TGCCTTTCTTACACCGCATAACTTCGATTCCCAAGAAATATTTCAAGGAACCCAAATCCTTTGTATGAAACTGTGTTTTAAGAAATTCTTTTAAGGATGTGATGCCAGCAATGTCACTTC
CTGTGATAACGATATCATCCACATATACTACAAGCAGAATTACTCCACTATCAGAATTTCTATAAAACACTGAGTGATCACACTTACTCATCTTCATTCCAAACTGTTGGACCACCTCAC
TAAACCTGCCAAACCATGCCTGAGGACTCTGTTTCAAGCCATAAAGCGATTTTCGAAGTCTACAAACTTTACCTGACTCCCCCTGAGCAACAAAACCAGGTGGTTGCTCAATATAAACCT
CCTCCTGAAGATCACCATGAAGAAAAGCATTTTTAATATCCAGTTGATGCAAAGGCCAATCATGAGTAGCCGCCAAGGAAATAAACAATCGGACAGATGCGAGCTTGGCAACTGGGAGAA
TGTATCAGAATAGTCAATTCCATAAGTTTGTGCATAACCTTTGGCCACTAAACGGGCCTTGAGGCGAGCAATAGATCCATCAGGATTTACTTTCACTGCAAACACCCATTTGCACCCAAT
AGCCCACTTTCCTGGGGGCAAGGACATCAACTCCCAAGTACCATTAGTGTCGAGGGCCATCATTTCCTCTTCCATTGCAGCACGCCAACCAGGATGGGACAAAGCCTCAATAACAGTTTT
GGGAATTAAAATAGAATCTAAAGCAGTGATAAAACAACGAGAAGAGGAGGATAATTGATCATAAGAGACACAAGATGAAATAAGATAAGTGCAAGTACGTTTACCTTTGCGAAGAGCAAT
GGGCAAATCCAAATCAGACAATGAAGGATCAGTAGGAGTAGGATCGGTCGACGAAGAAGCGAGTAGCGGAACGGAGTCAGAGTCCTCTAAGCGTCTGGAATACACATGAAAGATGGGAGG
GCGACCTGGCACATGAGCGAAATGTGTAGGAGTAGTCTGAGGAGAAGAAGAGCGAACAGTGTATAACAAGAGGTCATCTTCCTCCTCCTGGGTGTTATAAACAGATGATGGCGGAAAAAA
CGGAGTGGACTCAAAGAATGTTACATCCGCAGACACAAGATACCGATTCAGATCAGGAGAAAAACAACGATACCCTTTCTGACGTCGAGAGTAGCCAAGGAAGACACATTTGAGTGATTT
GGGATCCAATTTAGTAACTTGTGGACGAACATCACGAACAAAACAAGTACAACCAAAGAGACGTGGCTCAATAGGAAATAAAGATTTAGTGGAAAATAAAATGTTATAAGGGATATCACC
ATGAAGGACGGAGGAAGGCATGCGATTGATCAAAAAACAAGCAGTGGATACAACATCAGCCCAAAAACATTTAGGTACCTTCATTTGAAATAAGAGGGCTCTGGCTACTTCAAGAAGATG
TCGATTTTTTCTTTCAGCAACTCCATTTTGTGAAGGAGTGGCAACACAAGAGGACTGATGAAGAATCCCTTTTTGTAACAAATAAGATTGAAATTCCCCAGAGAGATACTCTTTAGCATT
ATCACACTGCAATATACGGATGGAAGTATTGAATTGGGTTTGGATTTCAGCATAAAATGCACAAAAAATAGAAAATAATTTTGAATGACTCTTCATTAAAAATAACCAAGTAGTACGAGA
GAAATCATCAACAAAGGTAACAAAATGCTTAAAGCCAGACTTAGACACAACAGGACAAGGACCCCAAACATCTGAATGGACTAACTCAAAGGGAGACGAAGCCCGTTTATTGACTCGAGA
CAAAGTAGGTAAACGATGATGTTTGGCAAATTGACAAGACTCACAATCTAGAATAGACAAAGAATGAAACTGTGGATATAACTTCTTCAAAACCGAGAGAGAAGGATGCCCTAAACGACA
ATGAACATCAAAAGGTGTTAAACGCGTGGAGCATACCAGAGATCGAGGAGATCGAGGTAGTTGCTGATCCAAGACGTAAAGACCCTCTGACTCACTTCCTCTACCAATAATCTGCTTCGT
CGAAAGATCCTGAAAAACACAGTGATCAGAAAAGAATGAGACACAATAATTCAATGCATGAGTGAGTTTACTCACGGAAAGCAAATTAAATGCGAACTTAGGGAGACATAACACAGAGGA
TACAGAAAGAGAAGGGGTTAAGTTGACATGACCAGAACCCATGACAGACGATTTAGTGCCATCAGCAAGAGTAACATAAGAAGGCAATGTATGAGACTCAAGATTGGACAAAAGGGTAGA
ATTACCTGACATATGATCGGTAGCACCAGAATCAATAACCCATTTGGAGGATGAAGACACAAGACATGCAGTAGAGTTACCTGACTCGGCAATTGCAGTGATAGAAGAGGAATTAGAAGA
TTTTATAGATGCCTGGTATTGGATGAATTGTGCATACTCATATGCAGATATCAAAATTCCCTGATCGGAAGATCCATTCAATTTGTGTTCCGTGATTTTAGTCATCATAGGAATCACATC
AGTTACGGTGGTGGTTTTAACTTCAGCCATAAGGACAACAAACCCAAAAACGATAGCAACAAAAGAAACACAGAATCAGAAAACAGTACCCGGCGTGAACGGTACCGATGAACAGTACCG
GTGAACAGTACCCGTGAACAGTGCCGATGAACAGTACTAAATAAAACACCTCCACCCAACACCCGAACGTTAAACAAACCTCAAATCTGACAAGGAGTCGGTGTGGTGACTCCAGCGATG
GTTAGATCCAAATGTTACCCTTTATGGATAACCCAAATGAACGGAGCCCTAAGTCTCCAAAAAAAATTTTAAAACTTTACGAGAGAGAAAAGAGAAAAAAAATCTCTATGAGAAAGGCTC
TGATACTATGTAGAAGGATAATATTTATTGTATATCACAATAGAGATTACAACCTATTTATACATGAGAGACGGTATCAAAATCAAGCCTATGATTATACAATCCCTAAAATTAAGCAAC
TGACCCATCTATCAATATTTACTTCCTATATTAACATATTTACTTTCTATAACTTATAACATGAGCAATACCACCTCTATGACTAGTGGCATTGGCCATCACCTTGTTCACGTGGCTAAA
AAATCCTGATTTGGAAAATTTTTCAATTTCACAGATTTCCATATGTATATATATATACTCTTTGAACTCAGTTTTGGTGAAATGCTCTCAAATTGTGCATGATCTCCTGCCAGCTAACAC
GAAACTGGGTGCATTGTTGTTTAGATTCTTCAGAAAGCAAAGAGCGAAGTGGATTCAAAACAATCAGGTGGTTATTATGGTGCTGTATGAAAGGGGTCAATAATGGTAGATGTATGTTTC
CTTGCTGATGCAACAATTTCTTTTCCGTTGTTAGTATCTCGTGGGCAGACATGATTGCTGTAGCTGGAGCTGAAGCCGTTTCAATCTGTGGAGGTCCAACAATTCCAGTTATATTAGGAA
GACGAGATTCAGTGTAAGACAGTTTAAAATGGAATAAGACTTGGTATTAGATATATGAACTGAGTTACTAAGGTTGAGTTATCCACAAGCCTTTCAAATGAGCTTGTGAAAAACTTGCCA
AATATTGTTAAGCTTGATTGAAAATCATGTCTTGATTTATGCAGCTTTAGTGTAAAATTATGAGGAAAGTAGGAATTTTCAACAGTACCTCCTTAAATTCTCGGCTTTAATAGCTGCAAT
ATCTCTTTACAGGGAGCGCCTGATGCTGAAGGCAGACTTCCTGAAGAGTCTCTGGGTGCTTCCGCTTTGAAGCAATGTTTTAAAAGAAAAGGCTTATCGTGAGTTTACGTCCGTGTTTTC
ATTGGCATTTTGCATATGTAATTGTAAAAAACTGTTTAAACATGTCAATTCTCCATTTGCTATGTGAATTTGAGCTTTTAAAACCAATTTCTTTGGCCTTCAAAATTGACTTTGTTGTTT
CAACATTCTCATTTGGTATTACTGATTGCATGTGAGATTACCTTAAAAAGTCTTTCATTGCCCTATACTTGGTTTTGTTGCAATTACCAAAGAAAATATAAAATTTAACAATCTTTCGAT
TTTTTGTCATGATTATGTTAAGATATGGAGTGCAATGATATATTATGGACTGTACACTGTTCCACAGTCTGATGGAAACCATTCCTGCATCACAGAACACACAAGTACTAGTTGCCCTGT
CTGGAGCTCATACTCTTGGGAGTAAAGGCTTTGGAAATCCATTTGTTTTTGACAATTCATACTATAAAATTCTCTTGGAAAAGCCATGGAACTCTTCAGGTAAAGATTATTCAACAACTT
GTTCTGGCTGTATTAGTATTAGATAGTTCTTTTTATAATCTCAAATTGTTCATCTTTAAGGTATCTGAGAACCCTGTTACACTGCTGGCATAGTATGCATCACAACAAATGACCATTTGT
CCACAGCCATGGAAGAAGACTTCTCCTGCCATTTCATTTCACTAGTCAAAACTCCCAAGTTCTTTACATTAGTCCTTTTGACTAAACCAAGCATTTATTTAAAGTATTTACCACATTTTT
GGTCCCTTTTCTTTGAAATTTTTTCGGCATGATCTGATATCACTATTGCTTCTGTTCTTTAATTGCAGATAAAAAATGGCAAGCATGATTGGACTTCCTTCAGATCATGCACTTGTTGAG
GACGATGAATGCTTAAGGTTGGTCATCTTCTGAAACCTCCCATTTCTGTGTTAAACACTCATGAACTGCACCATAATGAATCAGTCAAGCAAATGTGAAATTGTTAGACTTAGTTTTTGC
TTCCTCTATATGCTTGTCTGAAAAAGAAACTCATGACATTATAGCATAAACATGGGCTCACAACACTGAAAGAAAACTCATGTTTGGTTCAGATGGAGATCAAAAAGTATGCTGATGACC
AGGATATTTTCTTCGAAGATTTCAAGAATGCGTATATCAAACTTGTGAATTCTGGTGCAAGATGGAAAAGCTTGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCATCTTTAACCATTCTCCCCGCCAAAGCTCCTCTTGTTAGCTCCATTCCATCCTCCTCTTCCCATCTCGAATTCAAATTTCCCGTCAAATTACAACATTCCTCTCTCTCAACTGTC
AAATTTAGACTCAAACCTCTCCAGGCTCGCTTTATTCCTAATATGTTTTTGGGGTCTACAGGCGAGAATCTTGACTGGGTTTCTAAGAGGAGGAGAAACCTCATTTGTGTTTCCACACTG
CCTTTTCTATTTCATTTTCGAGAATCCTTCGATTCTTTTCTCTGTTGATCCTGAAGATTGGATGCCACATATATGCTCATGAAGGAAGAAGTAAGGAAGGTAGTGTCCAAAGGCAAGGCT
CCTGGCGTACTTCGACTTGTTTTTCATGATGCAGGAATCTACACTATGATTATATCTGCAGGGGGTATGAATGGTTCTATAGTTTTTGAACTTGATAGACCTGAAAATTCGTGGGCAGAC
ATGATTGCTGTAGCTGGAGCTGAAGCCGTTTCAATCTGTGGAGGTCCAACAATTCCAGTTATATTAGGAAGACGAGATTCAGTGTAGCCTGATGCTGAAGGCAGACTTCCTGAAGAGTCT
CTGGGTGCTTCCGCTTTGAAGCAATGTTTTAAAAGAAAAGGCTTATCGTGACAAGTACTAGTTGCCCTGTCTGGAGCTCATACTCTTGGGAGTAAAGGCTTTGGAAATCCATTTGTTTTT
GACAATTCATACTATAAAATTCTCTTGGAAAAGCCATGGAACTCTTCAGGTAAAATGGCAAGCATGATTGGACTTCCTTCAGATCATGCACTTGTTGAGGACGATGAATGCTTAAGGTTG
ATCAAAAAGTATGCTGATGACCAGGATATTTTCTTCGAAGATTTCAAGAATGCGTATATCAAACTTGTGAATTCTGGTGCAAGATGGAAAAGCTTGTGA

Retrieve as FASTA