1. Browse the Database
  2. View Redoxidase
Entry information : MeAPx-R (cassava4.1_018316m)
Entry ID 7460
Creation 2010-08-09 (Christophe Dunand)
Last sequence changes 2015-12-16 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-16 (Christophe Dunand)
Peroxidase information: MeAPx-R (cassava4.1_018316m)
Name (synonym) MeAPx-R (cassava4.1_018316m)
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Manihot
Organism Manihot esculenta (cassava)    [TaxId: 3983 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MeAPx-R
start..stop		 S start..stop
RcAPx-R 499 7.03e-180 24..335 18..328
PtAPx-R 486 1.81e-174 1..335 1..337
VvAPx-R 452 2.48e-161 25..336 22..331
CsAPx-R 429 4.04e-152 16..335 18..335
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1403454..1403634 179 N° 2 1403175..1403289 113 N° 3 1402651..1402775 123 N° 4 1402051..1402121 69
N° 5 1397483..1397580 96 N° 6 1397160..1397243 82 N° 7 1396681..1396802 120 N° 8 1396285..1396351 65
N° 9 1395990..1396089 98  
complement(join(1395990..1396089,1396285..1396351,1396681..1396802,1397160..1397 243,1397483..1397580,1402051..1402121,1402651..1402775,1403175..1403289,1403454. .1403634))


exon

Literature and cross-references MeAPx-R (cassava4.1_018316m)
DNA ref. Phytozome 12:   scaffold00847 (1403634..1395990)
EST ref. GenBank:   DV446698.1 [3' end]
Cluster/Prediction ref. UniGene:   Mes.8692 [3' end]
Protein sequence: MeAPx-R (cassava4.1_018316m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335 (301)
PWM (Da):   %s   36788.96 (31597.9)  
PI (pH):   %s   7.98 (6.50) Peptide Signal:   %s   cut: 0 range:Ymax-300
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASLTILPAKAPLVSSIPSSSSHLEFKFPVKLQHSSLSTVKFRLKPLQARFIPATGDEDSGENLDWVSKRRRNLICVSTLPFLFHFRESFEGFSAEAAELDATYMLMKEEVRKVVSKGKA
PGVLRLVFHDAGTFETDGNSGGMNGSIVFELDRPENAGLKKSLKILQKAKSEVDSKQSVSWADMIAVAGAEAVSICGGPTIPVILGRRDSVEPDAEGRLPEESLGASALKQCFKRKGLST
QVLVALSGAHTLGSKGFGNPFVFDNSYYKILLEKPWNSSDKMASMIGLPSDHALVEDDECLRWIKKYADDQDIFFEDFKNAYIKLVNSGARWKSL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns) and 1 EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCTTTAACCATTCTCCCCGCCAAAGCTCCTCTTGTTAGCTCCATTCCATCCTCCTCTTCCCATCTCGAATTCAAATTTCCCGTCAAATTACAACATTCCTCTCTCTCAACTGTC
AAATTTAGACTCAAACCTCTCCAGGCTCGCTTTATTCCGGCCACTGGCGATGAAGATTCTGGTAAACTGTACCGTCTCTTTATCATGGTGTGTTTGATTGCTGAGAAAACGAAGCAAATA
ATAATAATAATAATAAAGAGAAGAAGATAAGAGTAGTTTTTCTAATATGTTAATAAAGAGAAGAAGATAAGAATAGTTTTTCTCTAATATGTTTTTGGGGTCTACAGGCGAGAATCTTGA
CTGGGTTTCTAAGAGGAGGAGAAACCTCATTTGTGTTTCCACACTGCCTTTTCTATTTCATTTTCGAGAATCCTTCGAGGGCTTTAGTGCTGAGGCAGCTGAGTGAGTTAATCAAATCCC
TCGCTTTTTTTCTTTGGTTCAGCTGCTTCAATTTTGAATCCCTTTTCTTTTACTTGTAAACGTTTGATTCAAGTAGACAATACACGACTATGATTTTGTTCCGCAACTATAGGAGGATTG
TTGACATATACTTCTACTGTCTTCATGTTTCCTTTTTTTCTAGTGGAGGTTTATCTTGAAAGATGATCCTCGAATTTTTTATGTCACAGACATGTGAGTGCTCAGCTACTTACAGCCTCA
ATGTTTGTGACTTAGATGCTTTAGTGTAATCTTAAGTGTGTCCACGGTAGATATATGTGTTTCTGCTTGTAGTGCCTCACTAGATGCTAGTTATTCAATGTTCTTATTTTTATGATTTTT
TCTTTTCTCTGTTGATCCTGAAGATTGGATGCCACATATATGCTCATGAAGGAAGAAGTAAGGAAGGTAGTGTCCAAAGGCAAGGCTCCTGGCGTACTTCGACTTGTTTTTCATGATGCA
GGAACCTTTGAAACGGATGGTAATTCAGGTATTTATCATGGGAAAATCATATGATTTTAAAGTGATTATAGTTATCATTTGTATTAGGAATTCCCATCAAATGGTTTGATAAGATGTTTT
ATTGGACCTTTGTAATATAATGAAAACTTTTAAGTAAAACTTTATGTAACTAGGTTGTTATGATGTGAACTTTTATTGTCTGGGGTATGCACACTTAAAATTAATTCATGGAGGATTACT
GCCAAAGCTACTTCCTGCTAAGACAATTTATGCCAATCAATAAGCTCATTCATTAGTAATTCTGTAGAATCATTTGAATAGCTTGAGATGGTTGATGCCTTTGGTGTTCAAGGTGCTGTG
GAAATTATTATTTTAACTTTGGTTCTGTTGAAATGGTATGTGAACACGGGTGAAGCCATTCAGTTACTGTGAATTATTTTTTTATGCTGCAGTTTGTTCTTTTTCTTGTTTGCTTATTCC
TTTACATTCAAACTTACTAGGTATAGTGCTGTTCTCTTTTGCTTTAGACTTACTCTCTACACTATGATTATATCTGCAGGGGGTATGAATGGTTCTATAGTTTTTGAACTTGATAGACCT
GAAAATGCAGGTTTAAAGAAATCTTTGAAGGTATTTCTCTCTCGCTTTCTCTTCTATAAACACCAACATGTAACCTGCTCGCTTGTATATGAATGCATATTTGAAGTTTGAGTGTGTGGT
TTTAGCAGTTTTAATAAATATGTTTACTCTAAATTATAAAATTAATATAAATTTGTAGTGGTGAATCATAATATATACTACTTATGTCAAATAACATACTTTTAGTGACCAAGTAGTTTC
ACTCAAACTTTTTGTAATTAAAAAAAATCAAGTTAAAGAAAAATTAACTCAGAGTAGTCTTTTCAGAATTTGACAATAACCATTTATGGTGGTTGTGAGCTGTAGAAGGATAATATTTAT
TGTATATCACAATAGAGATTACAACCTATTTATACATGAGAGACAGTAACTAAACAGAAAGGAAATGACAATCAATCTCGATGTGTTTAGTCCTCTCGTGAAATACTGGATTGGAGGCAA
TGTGGATAGCTGCTTGATTATCACATTACAACTTAGCAGGCACCGAATTTGTGAACCCAACTTCTTCCAACAGTTGACGTACCCACAAGATTTCACAAACGGCTTGTGCCATAGCTCGAT
ATTCAGATTCAGCACTAGAACGGGAGACCACATTTTGCTTCTTACTTTTCCATGAGACCAAGTTACCTCCCACAAAAACACAATACCCAGTAATTGACCTCCTATCAACTTTCGAGCCTG
CCCAATCAGCATCACAAAAGCATTCAATATTTGAGTGCCCATGGTTACCATAGAATAGGCCTCTCCCTGGGGCCCCTTTAAGGTAACAAAGAATCTGTCCTAGAGCATCCCAATGGGCAA
CAGTAGGAGAAGACATAAACTGACTTACCACACTCACTGAATATGCAATATCAGGACGAGTCACCGTCAAATAATTCAGCTTGCCAACTAATCTTCTATACCTTCCAGGATCTGCAAATG
GCTCACTGTCTTCTGTGGTAAGTTGAAGGTTAGGGGTCATTGGGGCACTACAAGGCTTAGCACCCAATTTTCCTGTTTCTGCCAACAAATCAAGAACATATTTTCTTTGAGACAAGAAGA
TGCCTTTCTTACACCGCATAACTTCGATTCCCAAGAAATATTTCAAGGAACCCAAATCCTTTGTATGAAACTGTGTTTTAAGAAATTCTTTTAAGGATGTGATGCCAGCAATGTCACTTC
CTGTGATAACGATATCATCCACATATACTACAAGCAGAATTACTCCACTATCAGAATTTCTATAAAACACTGAGTGATCACACTTACTCATCTTCATTCCAAACTGTTGGACCACCTCAC
TAAACCTGCCAAACCATGCCTGAGGACTCTGTTTCAAGCCATAAAGCGATTTTCGAAGTCTACAAACTTTACCTGACTCCCCCTGAGCAACAAAACCAGGTGGTTGCTCAATATAAACCT
CCTCCTGAAGATCACCATGAAGAAAAGCATTTTTAATATCCAGTTGATGCAAAGGCCAATCATGAGTAGCCGCCAAGGAAATAAACAATCGGACAGATGCGAGCTTGGCAACTGGGAGAA
TGTATCAGAATAGTCAATTCCATAAGTTTGTGCATAACCTTTGGCCACTAAACGGGCCTTGAGGCGAGCAATAGATCCATCAGGATTTACTTTCACTGCAAACACCCATTTGCACCCAAT
AGCCCACTTTCCTGGGGGCAAGGACATCAACTCCCAAGTACCATTAGTGTCGAGGGCCATCATTTCCTCTTCCATTGCAGCACGCCAACCAGGATGGGACAAAGCCTCAATAACAGTTTT
GGGAATTAAAATAGAATCTAAAGCAGTGATAAAACAACGAGAAGAGGAGGATAATTGATCATAAGAGACACAAGATGAAATAAGATAAGTGCAAGTACGTTTACCTTTGCGAAGAGCAAT
GGGCAAATCCAAATCAGACAATGAAGGATCAGTAGGAGTAGGATCGGTCGACGAAGAAGCGAGTAGCGGAACGGAGTCAGAGTCCTCTAAGCGTCTGGAATACACATGAAAGATGGGAGG
GCGACCTGGCACATGAGCGAAATGTGTAGGAGTAGTCTGAGGAGAAGAAGAGCGAACAGTGTATAACAAGAGGTCATCTTCCTCCTCCTGGGTGTTATAAACAGATGATGGCGGAAAAAA
CGGAGTGGACTCAAAGAATGTTACATCCGCAGACACAAGATACCGATTCAGATCAGGAGAAAAACAACGATACCCTTTCTGACGTCGAGAGTAGCCAAGGAAGACACATTTGAGTGATTT
GGGATCCAATTTAGTAACTTGTGGACGAACATCACGAACAAAACAAGTACAACCAAAGAGACGTGGCTCAATAGGAAATAAAGATTTAGTGGAAAATAAAATGTTATAAGGGATATCACC
ATGAAGGACGGAGGAAGGCATGCGATTGATCAAAAAACAAGCAGTGGATACAACATCAGCCCAAAAACATTTAGGTACCTTCATTTGAAATAAGAGGGCTCTGGCTACTTCAAGAAGATG
TCGATTTTTTCTTTCAGCAACTCCATTTTGTGAAGGAGTGGCAACACAAGAGGACTGATGAAGAATCCCTTTTTGTAACAAATAAGATTGAAATTCCCCAGAGAGATACTCTTTAGCATT
ATCACACTGCAATATACGGATGGAAGTATTGAATTGGGTTTGGATTTCAGCATAAAATGCACAAAAAATAGAAAATAATTTTGAATGACTCTTCATTAAAAATAACCAAGTAGTACGAGA
GAAATCATCAACAAAGGTAACAAAATGCTTAAAGCCAGACTTAGACACAACAGGACAAGGACCCCAAACATCTGAATGGACTAACTCAAAGGGAGACGAAGCCCGTTTATTGACTCGAGA
CAAAGTAGGTAAACGATGATGTTTGGCAAATTGACAAGACTCACAATCTAGAATAGACAAAGAATGAAACTGTGGATATAACTTCTTCAAAACCGAGAGAGAAGGATGCCCTAAACGACA
ATGAACATCAAAAGGTGTTAAACGCGTGGAGCATACCAGAGATCGAGGAGATCGAGGTAGTTGCTGATCCAAGACGTAAAGACCCTCTGACTCACTTCCTCTACCAATAATCTGCTTCGT
CGAAAGATCCTGAAAAACACAGTGATCAGAAAAGAATGAGACACAATAATTCAATGCATGAGTGAGTTTACTCACGGAAAGCAAATTAAATGCGAACTTAGGGAGACATAACACAGAGGA
TACAGAAAGAGAAGGGGTTAAGTTGACATGACCAGAACCCATGACAGACGATTTAGTGCCATCAGCAAGAGTAACATAAGAAGGCAATGTATGAGACTCAAGATTGGACAAAAGGGTAGA
ATTACCTGACATATGATCGGTAGCACCAGAATCAATAACCCATTTGGAGGATGAAGACACAAGACATGCAGTAGAGTTACCTGACTCGGCAATTGCAGTGATAGAAGAGGAATTAGAAGA
TTTTATAGATGCCTGGTATTGGATGAATTGTGCATACTCATATGCAGATATCAAAATTCCCTGATCGGAAGATCCATTCAATTTGTGTTCCGTGATTTTAGTCATCATAGGAATCACATC
AGTTACGGTGGTGGTTTTAACTTCAGCCATAAGGACAACAAACCCAAAAACGATAGCAACAAAAGAAACACAGAATCAGAAAACAGTACCCGGCGTGAACGGTACCGATGAACAGTACCG
GTGAACAGTACCCGTGAACAGTGCCGATGAACAGTACTAAATAAAACACCTCCACCCAACACCCGAACGTTAAACAAACCTCAAATCTGACAAGGAGTCGGTGTGGTGACTCCAGCGATG
GTTAGATCCAAATGTTACCCTTTATGGATAACCCAAATGAACGGAGCCCTAAGTCTCCAAAAAAAATTTTAAAACTTTACGAGAGAGAAAAGAGAAAAAAAATCTCTATGAGAAAGGCTC
TGATACTATGTAGAAGGATAATATTTATTGTATATCACAATAGAGATTACAACCTATTTATACATGAGAGACGGTATCAAAATCAAGCCTATGATTATACAATCCCTAAAATTAAGCAAC
TGACCCATCTATCAATATTTACTTCCTATATTAACATATTTACTTTCTATAACTTATAACATGAGCAATACCACCTCTATGACTAGTGGCATTGGCCATCACCTTGTTCACGTGGCTAAA
AAATCCTGATTTGGAAAATTTTTCAATTTCACAGATTTCCATATGTATATATATATACTCTTTGAACTCAGTTTTGGTGAAATGCTCTCAAATTGTGCATGATCTCCTGCCAGCTAACAC
GAAACTGGGTGCATTGTTGTTTAGATTCTTCAGAAAGCAAAGAGCGAAGTGGATTCAAAACAATCAGGTGGTTATTATGGTGCTGTATGAAAGGGGTCAATAATGGTAGATGTATGTTTC
CTTGCTGATGCAACAATTTCTTTTCCGTTGTTAGTATCTCGTGGGCAGACATGATTGCTGTAGCTGGAGCTGAAGCCGTTTCAATCTGTGGAGGTCCAACAATTCCAGTTATATTAGGAA
GACGAGATTCAGTGTAAGACAGTTTAAAATGGAATAAGACTTGGTATTAGATATATGAACTGAGTTACTAAGGTTGAGTTATCCACAAGCCTTTCAAATGAGCTTGTGAAAAACTTGCCA
AATATTGTTAAGCTTGATTGAAAATCATGTCTTGATTTATGCAGCTTTAGTGTAAAATTATGAGGAAAGTAGGAATTTTCAACAGTACCTCCTTAAATTCTCGGCTTTAATAGCTGCAAT
ATCTCTTTACAGGGAGCGCCTGATGCTGAAGGCAGACTTCCTGAAGAGTCTCTGGGTGCTTCCGCTTTGAAGCAATGTTTTAAAAGAAAAGGCTTATCGTGAGTTTACGTCCGTGTTTTC
ATTGGCATTTTGCATATGTAATTGTAAAAAACTGTTTAAACATGTCAATTCTCCATTTGCTATGTGAATTTGAGCTTTTAAAACCAATTTCTTTGGCCTTCAAAATTGACTTTGTTGTTT
CAACATTCTCATTTGGTATTACTGATTGCATGTGAGATTACCTTAAAAAGTCTTTCATTGCCCTATACTTGGTTTTGTTGCAATTACCAAAGAAAATATAAAATTTAACAATCTTTCGAT
TTTTTGTCATGATTATGTTAAGATATGGAGTGCAATGATATATTATGGACTGTACACTGTTCCACAGTCTGATGGAAACCATTCCTGCATCACAGAACACACAAGTACTAGTTGCCCTGT
CTGGAGCTCATACTCTTGGGAGTAAAGGCTTTGGAAATCCATTTGTTTTTGACAATTCATACTATAAAATTCTCTTGGAAAAGCCATGGAACTCTTCAGGTAAAGATTATTCAACAACTT
GTTCTGGCTGTATTAGTATTAGATAGTTCTTTTTATAATCTCAAATTGTTCATCTTTAAGGTATCTGAGAACCCTGTTACACTGCTGGCATAGTATGCATCACAACAAATGACCATTTGT
CCACAGCCATGGAAGAAGACTTCTCCTGCCATTTCATTTCACTAGTCAAAACTCCCAAGTTCTTTACATTAGTCCTTTTGACTAAACCAAGCATTTATTTAAAGTATTTACCACATTTTT
GGTCCCTTTTCTTTGAAATTTTTTCGGCATGATCTGATATCACTATTGCTTCTGTTCTTTAATTGCAGATAAAAAATGGCAAGCATGATTGGACTTCCTTCAGATCATGCACTTGTTGAG
GACGATGAATGCTTAAGGTTGGTCATCTTCTGAAACCTCCCATTTCTGTGTTAAACACTCATGAACTGCACCATAATGAATCAGTCAAGCAAATGTGAAATTGTTAGACTTAGTTTTTGC
TTCCTCTATATGCTTGTCTGAAAAAGAAACTCATGACATTATAGCATAAACATGGGCTCACAACACTGAAAGAAAACTCATGTTTGGTTCAGATGGAGATCAAAAAGTATGCTGATGACC
AGGATATTTTCTTCGAAGATTTCAAGAATGCGTATATCAAACTTGTGAATTCTGGTGCAAGATGGAAAAGCTTGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCATCTTTAACCATTCTCCCCGCCAAAGCTCCTCTTGTTAGCTCCATTCCATCCTCCTCTTCCCATCTCGAATTCAAATTTCCCGTCAAATTACAACATTCCTCTCTCTCAACTGTC
AAATTTAGACTCAAACCTCTCCAGGCTCGCTTTATTCCTAATATGTTTTTGGGGTCTACAGGCGAGAATCTTGACTGGGTTTCTAAGAGGAGGAGAAACCTCATTTGTGTTTCCACACTG
CCTTTTCTATTTCATTTTCGAGAATCCTTCGATTCTTTTCTCTGTTGATCCTGAAGATTGGATGCCACATATATGCTCATGAAGGAAGAAGTAAGGAAGGTAGTGTCCAAAGGCAAGGCT
CCTGGCGTACTTCGACTTGTTTTTCATGATGCAGGAATCTACACTATGATTATATCTGCAGGGGGTATGAATGGTTCTATAGTTTTTGAACTTGATAGACCTGAAAATTCGTGGGCAGAC
ATGATTGCTGTAGCTGGAGCTGAAGCCGTTTCAATCTGTGGAGGTCCAACAATTCCAGTTATATTAGGAAGACGAGATTCAGTGTAGCCTGATGCTGAAGGCAGACTTCCTGAAGAGTCT
CTGGGTGCTTCCGCTTTGAAGCAATGTTTTAAAAGAAAAGGCTTATCGTGACAAGTACTAGTTGCCCTGTCTGGAGCTCATACTCTTGGGAGTAAAGGCTTTGGAAATCCATTTGTTTTT
GACAATTCATACTATAAAATTCTCTTGGAAAAGCCATGGAACTCTTCAGGTAAAATGGCAAGCATGATTGGACTTCCTTCAGATCATGCACTTGTTGAGGACGATGAATGCTTAAGGTTG
ATCAAAAAGTATGCTGATGACCAGGATATTTTCTTCGAAGATTTCAAGAATGCGTATATCAAACTTGTGAATTCTGGTGCAAGATGGAAAAGCTTGTGA

Retrieve as FASTA