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Entry information : FpinCIIBA
Entry ID 8500
Creation 2011-09-20 (Christophe Dunand)
Last sequence changes 2012-11-06 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-18 (Catherine Mathe)
Peroxidase information: FpinCIIBA
Name FpinCIIBA
Class Other class II peroxidase type A    [Orthogroup: CIIBA001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Fomitopsis
Organism Fomitopsis pinicola    [TaxId: 40483 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value FpinCIIBA
start..stop		 S start..stop
DqueCIIBB01 407 4.92e-144 52..315 1..264
LsulCIIBA01 387 2.23e-135 43..325 39..321
WcoCIIBA 385 7.97e-135 42..318 24..300
PplCIIBA 362 5.33e-126 47..320 12..285
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8500' 'complement(join(576089..576237,576303..576447,576498..576792,576841..576919,576973..577028,577087..577191,577244..577269,577322..577339,577390..577515))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 577390..577515 124 N° 2 577322..577339 16 N° 3 577244..577269 24 N° 4 577087..577191 103
N° 5 576973..577028 54 N° 6 576841..576919 77 N° 7 576498..576792 293 N° 8 576303..576447 143
N° 9 576089..576237 147  
complement(join(576089..576237,576303..576447,576498..576792,576841..576919,5769 73..577028,577087..577191,577244..577269,577322..577339,577390..577515))


exon

Literature and cross-references FpinCIIBA
DNA ref. JGI genome:   scaffold_3 (577515..576089)
Cluster/Prediction ref. JGI gene:   281595
Protein sequence: FpinCIIBA
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (312)
PWM (Da):   %s   34690.32 (32688.2)  
PI (pH):   %s   5.32 (5.12) Peptide Signal:   %s   cut: 21 range:21-332
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MMLRLASLFSLASALGVALGATSPHFLSVDASEPSLAFAPEECRKWMKIMPVLQANIFDEGQCNDQAREAIRLTFHDGVGRSTILEKAGAFSGGGADGSIIRFAETELAPANDGLENIVLSLQDVADNHNVSYGDIIQFAGAVGLSNCPGSPRLPFYAGRPN
AVAPSPPGLVPSPTDDADTILARMSDAGFTAEDTVALLAAHSVARQKTVDPSVPNVPFDSTPGAFDTKFYAMLLKGMGYPGKGGNSAEVKSASKHVMRLASDAALAQHPITSALWRSFAG
DHNAMRAAFRDAMQKLANQGHAGLVNCSSVIPLPAPLQDRPGVQDSIL

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns). Concerved residues are missing in 3'.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGCTCAGGCTAGCATCGCTTTTTTCTCTTGCCTCTGCCCTCGGCGTCGCACTGGGTGCGACAAGCCCGCATTTCCTTTCTGTCGACGCCAGTGAGCCATCACTGGCGTTTGCGCCG
GAGGAGGTGTGCCACCATGTATACAACTTATCCCATGTTTCTGACTATGACTGAAGTGTGTAGAAAGTGGATGAAGGTACGAGCTACGTTCAAACCATCCTTACGCGTGTAACAATGCAT
CGAGGTAGATATTATGCCCGTGCTTCAGGCGAACATGTAAGTCAATTTATCCTTAGGGCCCTCCAGCTGTCAAGAAACTGTACACCAGATATTCGACGAAGGCCAATGTAATGATCAAGC
ACGAGAGGCCATTCGGCTCACCTTTCATGATGGGGTGGGCAGGTCTACCATCCTTGAAAAAGCCGGCGCATTTTCGTAAGAATGTCGGCCTTGCTATGAGTGTGACCACACTGACCACAC
CTCTATATTCTAGAGAGGCGGCGGTGCGGACGGAAGCATCATTCGCTTTGCAGAGACCGAGCTAGCTAATCGTACGTATGTTGAGCCCGTCGCACGTAGTCTAATCGCATCACACCTTGC
ACAGCTCTGCGAACGATGGCCTAGAAAACATCGTCCTATCTCTCCAAGACGTCGCCGACAACCACAACGTCTCGTATGGCGATATGTACGTTCCAGAAATCTTGCTCTAGATTCTGGGGC
CGACTCCGCGTAGAAAATACAGTTCGCTGGTGCAGTCGGCCTCTCCAACTGCCCAGGGAGCCCCCGCCTCCCGTTCTACGCCGGACGGCCTAACGCCGTCGCACCCTCGCCGCCCGGTCT
CGTTCCCTCCCCAACCGACGACGCCGACACCATATTGGCGCGTATGTCCGACGCAGGATTCACCGCAGAAGACACGGTAGCCCTTCTTGCCGCACACTCAGTCGCAAGGCAGAAGACGGT
TGACCCCAGTGTACCGAACGTGCCGTTCGACAGCACGCCCGGGGCGTTCGACACGAAATTTTACGCAGAGGTGCGTATTATCGGCGCGCTCGCGCGACATTGGAACTGACGTGATCCCAG
ATATGTTGCTCAAGGGCATGGGCTACCCTGGCAAGGGCGGGAACTCCGCTGAGGTGAAGTCCGCGTCCAAGCATGTCATGCGCCTTGCCTCCGACGCGGCACTCGCCCAACACCCGATTA
CATCCGCCCTCTGGCGTTCTTTCGCAGGTGGGCAGCCTTCACTGGCATCGCCGTGCACCCATCCCACACCACACTCACCGGGACCTCCTTAGGCGCGATCACAACGCTATGCGTGCGGCG
TTCCGGGACGCCATGCAGAAGCTCGCAAACCAGGGCCACGCCGGCCTCGTCAACTGTTCCTCCGTCATCCCCCTTCCCGCACCGCTGCAAGACCGCCCGGGTGTACAGGACAGTATACTT
TGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATGCTCAGGCTAGCATCGCTTTTTTCTCTTGCCTCTGCCCTCGGCGTCGCACTGGGTGCGACAAGCCCGCATTTCCTTTCTGTCGACGCCAGTGAGCCATCACTGGCGTTTGCGCCG
GAGGAGTGTAGAAAGTGGATGAAGATTATGCCCGTGCTTCAGGCGAACATATTCGACGAAGGCCAATGTAATGATCAAGCACGAGAGGCCATTCGGCTCACCTTTCATGATGGGGTGGGC
AGGTCTACCATCCTTGAAAAAGCCGGCGCATTTTCAGGCGGCGGTGCGGACGGAAGCATCATTCGCTTTGCAGAGACCGAGCTAGCTAATCCTGCGAACGATGGCCTAGAAAACATCGTC
CTATCTCTCCAAGACGTCGCCGACAACCACAACGTCTCGTATGGCGATATAATACAGTTCGCTGGTGCAGTCGGCCTCTCCAACTGCCCAGGGAGCCCCCGCCTCCCGTTCTACGCCGGA
CGGCCTAACGCCGTCGCACCCTCGCCGCCCGGTCTCGTTCCCTCCCCAACCGACGACGCCGACACCATATTGGCGCGTATGTCCGACGCAGGATTCACCGCAGAAGACACGGTAGCCCTT
CTTGCCGCACACTCAGTCGCAAGGCAGAAGACGGTTGACCCCAGTGTACCGAACGTGCCGTTCGACAGCACGCCCGGGGCGTTCGACACGAAATTTTACGCAGAGATGTTGCTCAAGGGC
ATGGGCTACCCTGGCAAGGGCGGGAACTCCGCTGAGGTGAAGTCCGCGTCCAAGCATGTCATGCGCCTTGCCTCCGACGCGGCACTCGCCCAACACCCGATTACATCCGCCCTCTGGCGT
TCTTTCGCAGGCGATCACAACGCTATGCGTGCGGCGTTCCGGGACGCCATGCAGAAGCTCGCAAACCAGGGCCACGCCGGCCTCGTCAACTGTTCCTCCGTCATCCCCCTTCCCGCACCG
CTGCAAGACCGCCCGGGTGTACAGGACAGTATACTTTGA

Retrieve as FASTA